RNA–Protein interactions for RNA: YGL090W

LIF1, Transcript of Component of the DNA ligase IV complex, yeastyeast

Gene LIF1, Length 1,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIF1YGL090W TAF11Q04226 346 aa3.61□□□□□ -1.83
LIF1YGL090W YMR111CQ04461 462 aaPredicted RBP3.61□□□□□ -1.83
LIF1YGL090W RNH1Q04740 348 aa3.61□□□□□ -1.83
LIF1YGL090W EIS1Q05050 843 aaKnown RBP3.61□□□□□ -1.83
LIF1YGL090W COQ11Q05892 277 aa3.61□□□□□ -1.83
LIF1YGL090W RSC3Q06639 885 aa3.61□□□□□ -1.83
LIF1YGL090W PEX15Q08215 383 aa3.61□□□□□ -1.83
LIF1YGL090W HSH49Q99181 213 aaPredicted RBP3.61□□□□□ -1.83
LIF1YGL090W SRD1P09007 221 aa3.6□□□□□ -1.83
LIF1YGL090W PMS1P14242 873 aa3.6□□□□□ -1.83
LIF1YGL090W PDX1P16451 410 aa3.6□□□□□ -1.83
LIF1YGL090W SAN1P22470 610 aa3.6□□□□□ -1.83
LIF1YGL090W PCL2P25693 308 aa3.6□□□□□ -1.83
LIF1YGL090W DAL80P26343 269 aa3.6□□□□□ -1.83
LIF1YGL090W DBF4P32325 704 aa3.6□□□□□ -1.83
LIF1YGL090W HEM12P32347 362 aaPredicted RBP3.6□□□□□ -1.83
LIF1YGL090W PUP2P32379 260 aa3.6□□□□□ -1.83
LIF1YGL090W PRP19P32523 503 aaKnown RBP3.6□□□□□ -1.83
LIF1YGL090W EMC3P36039 253 aa3.6□□□□□ -1.83
LIF1YGL090W DID4P36108 232 aa3.6□□□□□ -1.83
LIF1YGL090W MIC60P36112 540 aa3.6□□□□□ -1.83
LIF1YGL090W BIT2P38346 545 aa3.6□□□□□ -1.83
LIF1YGL090W CBR1P38626 284 aaKnown RBP3.6□□□□□ -1.83
LIF1YGL090W VPS41P38959 992 aa3.6□□□□□ -1.83
LIF1YGL090W SEC9P40357 651 aa3.6□□□□□ -1.83
LIF1YGL090W TAH11P47112 604 aa3.6□□□□□ -1.83
LIF1YGL090W UPF3P48412 387 aaKnown RBP3.6□□□□□ -1.83
LIF1YGL090W RNR4P49723 345 aaKnown RBP3.6□□□□□ -1.83
LIF1YGL090W AMA1P50082 593 aa3.6□□□□□ -1.83
LIF1YGL090W VPS73P53142 486 aaKnown RBP3.6□□□□□ -1.83
LIF1YGL090W IMO32P53219 342 aa3.6□□□□□ -1.83
LIF1YGL090W HST1P53685 503 aa3.6□□□□□ -1.83
LIF1YGL090W RIA1P53893 1110 aa3.6□□□□□ -1.83
LIF1YGL090W NCS2P53923 493 aaPredicted RBP3.6□□□□□ -1.83
LIF1YGL090W ARA2Q04212 335 aa3.6□□□□□ -1.83
LIF1YGL090W TDA9Q04545 1251 aa3.6□□□□□ -1.83
LIF1YGL090W YCG1Q06680 1035 aa3.6□□□□□ -1.83
LIF1YGL090W RRG1Q12167 365 aaPredicted RBP3.6□□□□□ -1.83
LIF1YGL090W TAH18Q12181 623 aa3.6□□□□□ -1.83
LIF1YGL090W STF1P01098 86 aa3.59□□□□□ -1.83
LIF1YGL090W GFA1P14742 717 aaKnown RBP3.59□□□□□ -1.83
LIF1YGL090W KIN3P22209 435 aa3.59□□□□□ -1.83
LIF1YGL090W RAD51P25454 400 aa3.59□□□□□ -1.83
LIF1YGL090W RPT3P33298 428 aaKnown RBP3.59□□□□□ -1.83
LIF1YGL090W FLO10P36170 1169 aa3.59□□□□□ -1.83
LIF1YGL090W UBS1P38290 277 aa3.59□□□□□ -1.83
LIF1YGL090W RIX1P38883 763 aaPredicted RBP3.59□□□□□ -1.83
LIF1YGL090W YIR042CP40586 236 aa3.59□□□□□ -1.83
LIF1YGL090W LAM5P43560 674 aa3.59□□□□□ -1.83
LIF1YGL090W SLD3P53135 668 aa3.59□□□□□ -1.83
LIF1YGL090W YGR283CP53336 341 aaPredicted RBP3.59□□□□□ -1.83
LIF1YGL090W CIA1Q05583 330 aa3.59□□□□□ -1.83
LIF1YGL090W YPR172WQ06608 200 aa3.59□□□□□ -1.83
LIF1YGL090W MLH2Q07980 695 aa3.59□□□□□ -1.83
LIF1YGL090W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
LIF1YGL090W SMF3Q12078 473 aaPredicted RBP3.59□□□□□ -1.83
LIF1YGL090W GPR1Q12361 961 aa3.59□□□□□ -1.83
LIF1YGL090W YNL162W-AQ3E7A8 72 aa3.59□□□□□ -1.83
LIF1YGL090W RPC40P07703 335 aaKnown RBP3.58□□□□□ -1.84
LIF1YGL090W TUB1P09733 447 aaKnown RBP3.58□□□□□ -1.84
LIF1YGL090W GLK1P17709 500 aaKnown RBP3.58□□□□□ -1.84
LIF1YGL090W SFL1P20134 766 aa3.58□□□□□ -1.84
LIF1YGL090W PER1P25625 357 aa3.58□□□□□ -1.84
LIF1YGL090W NGG1P32494 702 aa3.58□□□□□ -1.84
LIF1YGL090W RFC1P38630 861 aaKnown RBP3.58□□□□□ -1.84
LIF1YGL090W YLF2P38746 405 aa3.58□□□□□ -1.84
LIF1YGL090W YHR131CP38835 850 aa3.58□□□□□ -1.84
LIF1YGL090W RTT105P40063 208 aa3.58□□□□□ -1.84
LIF1YGL090W PCL7P40186 285 aa3.58□□□□□ -1.84
LIF1YGL090W ERR3P42222 437 aa3.58□□□□□ -1.84
LIF1YGL090W KEL2P50090 882 aa3.58□□□□□ -1.84
LIF1YGL090W MET13P53128 600 aa3.58□□□□□ -1.84
LIF1YGL090W YAP1802P53309 568 aa3.58□□□□□ -1.84
LIF1YGL090W ZDS2P54786 942 aa3.58□□□□□ -1.84
LIF1YGL090W CIK1Q01649 594 aa3.58□□□□□ -1.84
LIF1YGL090W FCP1Q03254 732 aa3.58□□□□□ -1.84
LIF1YGL090W SKY1Q03656 742 aa3.58□□□□□ -1.84
LIF1YGL090W SYF1Q04048 859 aaPredicted RBP3.58□□□□□ -1.84
LIF1YGL090W ARP9Q05123 467 aa3.58□□□□□ -1.84
LIF1YGL090W SWA2Q06677 668 aa3.58□□□□□ -1.84
LIF1YGL090W YDL073WQ07454 984 aa3.58□□□□□ -1.84
LIF1YGL090W GUD1Q07729 489 aa3.58□□□□□ -1.84
LIF1YGL090W RRP36Q12481 300 aaPredicted RBP3.58□□□□□ -1.84
LIF1YGL090W ENT1Q12518 454 aa3.58□□□□□ -1.84
LIF1YGL090W CDC9P04819 755 aa3.57□□□□□ -1.84
LIF1YGL090W PHR1P05066 565 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
LIF1YGL090W ILS1P09436 1072 aaKnown RBP3.57□□□□□ -1.84
LIF1YGL090W LAT1P12695 482 aaKnown RBP3.57□□□□□ -1.84
LIF1YGL090W MET8P15807 274 aa3.57□□□□□ -1.84
LIF1YGL090W PET123P17558 318 aa3.57□□□□□ -1.84
LIF1YGL090W AAC3P18238 307 aa3.57□□□□□ -1.84
LIF1YGL090W CDC43P18898 376 aa3.57□□□□□ -1.84
LIF1YGL090W COX11P19516 300 aaKnown RBP3.57□□□□□ -1.84
LIF1YGL090W TRX1P22217 103 aaKnown RBP3.57□□□□□ -1.84
LIF1YGL090W RPC37P36121 282 aa3.57□□□□□ -1.84
LIF1YGL090W UIP5P36137 443 aa3.57□□□□□ -1.84
LIF1YGL090W CCL1P37366 393 aa3.57□□□□□ -1.84
LIF1YGL090W FTH1P38310 465 aa3.57□□□□□ -1.84
LIF1YGL090W SET5P38890 526 aaKnown RBP3.57□□□□□ -1.84
LIF1YGL090W ALG2P43636 503 aa3.57□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms