RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	SPO22	P40511	975 aa		4.2	□□□□□ -1.74
SPI1	YER150W	YIR014W	P40570	242 aa		4.2	□□□□□ -1.74
SPI1	YER150W	FET5	P43561	622 aa		4.2	□□□□□ -1.74
SPI1	YER150W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
SPI1	YER150W	ALT1	P52893	592 aa		4.2	□□□□□ -1.74
SPI1	YER150W	PAN2	P53010	1115 aa	Predicted RBP	4.2	□□□□□ -1.74
SPI1	YER150W	CPR6	P53691	371 aa	Known RBP	4.2	□□□□□ -1.74
SPI1	YER150W	RTC4	P53850	401 aa		4.2	□□□□□ -1.74
SPI1	YER150W	PEX13	P80667	386 aa		4.2	□□□□□ -1.74
SPI1	YER150W	UBP2	Q01476	1272 aa		4.2	□□□□□ -1.74
SPI1	YER150W	ROD1	Q02805	837 aa		4.2	□□□□□ -1.74
SPI1	YER150W	DON1	Q05610	365 aa		4.2	□□□□□ -1.74
SPI1	YER150W	TFC6	Q06339	672 aa		4.2	□□□□□ -1.74
SPI1	YER150W	RSC3	Q06639	885 aa		4.2	□□□□□ -1.74
SPI1	YER150W	YPL066W	Q12194	479 aa		4.2	□□□□□ -1.74
SPI1	YER150W	AHC1	Q12433	566 aa		4.2	□□□□□ -1.74
SPI1	YER150W	COB	P00163	385 aa		4.19	□□□□□ -1.74
SPI1	YER150W	PDC1	P06169	563 aa	Known RBP	4.19	□□□□□ -1.74
SPI1	YER150W	SEC53	P07283	254 aa	Known RBP	4.19	□□□□□ -1.74
SPI1	YER150W	GAL7	P08431	366 aa		4.19	□□□□□ -1.74
SPI1	YER150W	MSS116	P15424	664 aa	Known RBP	4.19	□□□□□ -1.74
SPI1	YER150W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
SPI1	YER150W	PWP1	P21304	576 aa	Known RBP	4.19	□□□□□ -1.74
SPI1	YER150W	PRP22	P24384	1145 aa	Known RBP	4.19	□□□□□ -1.74
SPI1	YER150W	CLB1	P24868	471 aa		4.19	□□□□□ -1.74
SPI1	YER150W	PRD1	P25375	712 aa		4.19	□□□□□ -1.74
SPI1	YER150W	SYP1	P25623	870 aa	Known RBP	4.19	□□□□□ -1.74
SPI1	YER150W	PHO91	P27514	894 aa		4.19	□□□□□ -1.74
SPI1	YER150W	ITR1	P30605	584 aa		4.19	□□□□□ -1.74
SPI1	YER150W	SRB4	P32569	687 aa		4.19	□□□□□ -1.74
SPI1	YER150W	MDL2	P33311	773 aa		4.19	□□□□□ -1.74
SPI1	YER150W	STB6	P36085	766 aa		4.19	□□□□□ -1.74
SPI1	YER150W	PXL1	P36166	706 aa		4.19	□□□□□ -1.74
SPI1	YER150W	YBR138C	P38277	524 aa		4.19	□□□□□ -1.74
SPI1	YER150W	YSW1	P38280	609 aa		4.19	□□□□□ -1.74
SPI1	YER150W	MSG5	P38590	489 aa		4.19	□□□□□ -1.74
SPI1	YER150W	YHB1	P39676	399 aa	Known RBP	4.19	□□□□□ -1.74
SPI1	YER150W	GIP4	P39732	760 aa		4.19	□□□□□ -1.74
SPI1	YER150W	MMM1	P41800	426 aa		4.19	□□□□□ -1.74
SPI1	YER150W	SSU1	P41930	458 aa		4.19	□□□□□ -1.74
SPI1	YER150W	PUS4	P48567	403 aa	Known RBP	4.19	□□□□□ -1.74
SPI1	YER150W	TAD1	P53065	400 aa		4.19	□□□□□ -1.74
SPI1	YER150W	RRT6	P53117	311 aa	Predicted RBP	4.19	□□□□□ -1.74
SPI1	YER150W	CUL3	P53202	744 aa		4.19	□□□□□ -1.74
SPI1	YER150W	DSE4	P53753	1117 aa		4.19	□□□□□ -1.74
SPI1	YER150W	BSC5	P53755	489 aa		4.19	□□□□□ -1.74
SPI1	YER150W	VPS75	P53853	264 aa		4.19	□□□□□ -1.74
SPI1	YER150W	MAK10	Q02197	733 aa		4.19	□□□□□ -1.74
SPI1	YER150W	NOG1	Q02892	647 aa	Known RBP	4.19	□□□□□ -1.74
SPI1	YER150W	ATP25	Q03153	612 aa		4.19	□□□□□ -1.74
SPI1	YER150W	ECM18	Q04623	453 aa		4.19	□□□□□ -1.74
SPI1	YER150W	SNO4	Q04902	237 aa		4.19	□□□□□ -1.74
SPI1	YER150W	CRN1	Q06440	651 aa		4.19	□□□□□ -1.74
SPI1	YER150W	HSP33	Q08914	237 aa	Known RBP	4.19	□□□□□ -1.74
SPI1	YER150W	HSP32	Q08992	237 aa		4.19	□□□□□ -1.74
SPI1	YER150W	SPE3	Q12074	293 aa	Known RBP	4.19	□□□□□ -1.74
SPI1	YER150W	CHS5	Q12114	671 aa	Known RBP	4.19	□□□□□ -1.74
SPI1	YER150W	HUA2	Q12134	243 aa		4.19	□□□□□ -1.74
SPI1	YER150W	NSI1	Q12457	570 aa		4.19	□□□□□ -1.74
SPI1	YER150W	SKM1	Q12469	655 aa		4.19	□□□□□ -1.74
SPI1	YER150W	BRR1	Q99177	341 aa	Predicted RBP	4.19	□□□□□ -1.74
SPI1	YER150W	NOT3	P06102	836 aa	Known RBP	4.18	□□□□□ -1.74
SPI1	YER150W	HEM13	P11353	328 aa	Known RBP	4.18	□□□□□ -1.74
SPI1	YER150W	DAT1	P13483	248 aa	Known RBP	4.18	□□□□□ -1.74
SPI1	YER150W	APE1	P14904	514 aa		4.18	□□□□□ -1.74
SPI1	YER150W	PRP6	P19735	899 aa	Predicted RBP	4.18	□□□□□ -1.74
SPI1	YER150W	CLB4	P24871	460 aa		4.18	□□□□□ -1.74
SPI1	YER150W	OCA4	P25366	362 aa		4.18	□□□□□ -1.74
SPI1	YER150W	ADP1	P25371	1049 aa		4.18	□□□□□ -1.74
SPI1	YER150W	KIP1	P28742	1111 aa		4.18	□□□□□ -1.74
SPI1	YER150W	CCR4	P31384	837 aa	Known RBP	4.18	□□□□□ -1.74
SPI1	YER150W	DUR3	P33413	735 aa		4.18	□□□□□ -1.74
SPI1	YER150W	SRB2	P34162	210 aa		4.18	□□□□□ -1.74
SPI1	YER150W	OAF3	P36023	863 aa		4.18	□□□□□ -1.74
SPI1	YER150W	UBP11	P36026	717 aa		4.18	□□□□□ -1.74
SPI1	YER150W	MRPL36	P36531	177 aa		4.18	□□□□□ -1.74
SPI1	YER150W	IFA38	P38286	347 aa		4.18	□□□□□ -1.74
SPI1	YER150W	EFM2	P38347	419 aa		4.18	□□□□□ -1.74
SPI1	YER150W	YHR202W	P38887	602 aa		4.18	□□□□□ -1.74
SPI1	YER150W	ACO2	P39533	789 aa		4.18	□□□□□ -1.74
SPI1	YER150W	MRX1	P40050	688 aa		4.18	□□□□□ -1.74
SPI1	YER150W	FTR1	P40088	404 aa		4.18	□□□□□ -1.74
SPI1	YER150W	EFM4	P40516	257 aa		4.18	□□□□□ -1.74
SPI1	YER150W	ENP2	P48234	707 aa	Known RBP	4.18	□□□□□ -1.74
SPI1	YER150W	LCL3	P53153	274 aa		4.18	□□□□□ -1.74
SPI1	YER150W	DUO1	P53168	247 aa	Known RBP	4.18	□□□□□ -1.74
SPI1	YER150W	DAM1	P53267	343 aa		4.18	□□□□□ -1.74
SPI1	YER150W	YGR283C	P53336	341 aa	Predicted RBP	4.18	□□□□□ -1.74
SPI1	YER150W	BRE5	P53741	515 aa	Known RBP	4.18	□□□□□ -1.74
SPI1	YER150W	NHX1	Q04121	633 aa		4.18	□□□□□ -1.74
SPI1	YER150W	LCD1	Q04377	747 aa		4.18	□□□□□ -1.74
SPI1	YER150W	RRN11	Q04712	507 aa		4.18	□□□□□ -1.74
SPI1	YER150W	OMS1	Q06668	471 aa		4.18	□□□□□ -1.74
SPI1	YER150W	UTP4	Q06679	776 aa	Known RBP	4.18	□□□□□ -1.74
SPI1	YER150W	LUC7	Q07508	261 aa	Predicted RBP	4.18	□□□□□ -1.74
SPI1	YER150W	VPS54	Q12071	889 aa		4.18	□□□□□ -1.74
SPI1	YER150W	AVL9	Q12500	764 aa		4.18	□□□□□ -1.74
SPI1	YER150W	CET1	O13297	549 aa	Predicted RBP	4.17	□□□□□ -1.74
SPI1	YER150W	TDH1	P00360	332 aa	Known RBP	4.17	□□□□□ -1.74
SPI1	YER150W	ADE3	P07245	946 aa	Known RBP	4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms