RNA–Protein interactions for RNA: YER021W

RPN3, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome lid, yeastyeast

Gene RPN3, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN3YER021W YIL077CP40508 320 aa3.72□□□□□ -1.81
RPN3YER021W VID28P40547 921 aa3.72□□□□□ -1.81
RPN3YER021W PXA1P41909 870 aa3.72□□□□□ -1.81
RPN3YER021W RFX1P48743 811 aa3.72□□□□□ -1.81
RPN3YER021W UBA2P52488 636 aa3.72□□□□□ -1.81
RPN3YER021W GND2P53319 492 aa3.72□□□□□ -1.81
RPN3YER021W CHS5Q12114 671 aaKnown RBP3.72□□□□□ -1.81
RPN3YER021W USV1Q12132 391 aa3.72□□□□□ -1.81
RPN3YER021W RPS9BP05755 195 aaKnown RBP3.71□□□□□ -1.82
RPN3YER021W PRP28P23394 588 aa3.71□□□□□ -1.82
RPN3YER021W COS111P38308 924 aa3.71□□□□□ -1.82
RPN3YER021W ENP1P38333 483 aaKnown RBP3.71□□□□□ -1.82
RPN3YER021W PIG2P40187 538 aa3.71□□□□□ -1.82
RPN3YER021W NIT2P47016 307 aa3.71□□□□□ -1.82
RPN3YER021W YFT2Q06676 274 aa3.71□□□□□ -1.82
RPN3YER021W TRE2Q08693 809 aa3.71□□□□□ -1.82
RPN3YER021W CLF1Q12309 687 aaPredicted RBP3.71□□□□□ -1.82
RPN3YER021W RMP1Q12530 201 aa3.71□□□□□ -1.82
RPN3YER021W SPT7P35177 1332 aa3.7□□□□□ -1.82
RPN3YER021W YEF3P16521 1044 aaKnown RBP3.7□□□□□ -1.82
RPN3YER021W AEP2P22136 580 aa3.7□□□□□ -1.82
RPN3YER021W MF(ALPHA)2P32435 120 aa3.7□□□□□ -1.82
RPN3YER021W MSS1P32559 526 aaPredicted RBP3.7□□□□□ -1.82
RPN3YER021W SET3P36124 751 aa3.7□□□□□ -1.82
RPN3YER021W NDC80P40460 691 aa3.7□□□□□ -1.82
RPN3YER021W MPS3P47069 682 aa3.7□□□□□ -1.82
RPN3YER021W COG6P53959 839 aa3.7□□□□□ -1.82
RPN3YER021W SKY1Q03656 742 aa3.7□□□□□ -1.82
RPN3YER021W YPR027CQ12079 277 aa3.7□□□□□ -1.82
RPN3YER021W MRH1Q12117 320 aaPredicted RBP3.7□□□□□ -1.82
RPN3YER021W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
RPN3YER021W APC1P53886 1748 aa3.69□□□□□ -1.82
RPN3YER021W ATP12P22135 325 aa3.69□□□□□ -1.82
RPN3YER021W SEC15P22224 910 aa3.69□□□□□ -1.82
RPN3YER021W PRP22P24384 1145 aaKnown RBP3.69□□□□□ -1.82
RPN3YER021W PRE4P30657 266 aa3.69□□□□□ -1.82
RPN3YER021W CCT7P42943 550 aaKnown RBP3.69□□□□□ -1.82
RPN3YER021W RNR4P49723 345 aaKnown RBP3.69□□□□□ -1.82
RPN3YER021W TAF4P50105 388 aa3.69□□□□□ -1.82
RPN3YER021W FOL1P53848 824 aa3.69□□□□□ -1.82
RPN3YER021W NSE5Q03718 556 aa3.69□□□□□ -1.82
RPN3YER021W ACO1P19414 778 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
RPN3YER021W HXT4P32467 576 aa3.68□□□□□ -1.82
RPN3YER021W CTP1P38152 299 aa3.68□□□□□ -1.82
RPN3YER021W KHA1P40309 873 aa3.68□□□□□ -1.82
RPN3YER021W ARG2P40360 574 aa3.68□□□□□ -1.82
RPN3YER021W ATG4P53867 494 aa3.68□□□□□ -1.82
RPN3YER021W PPN1Q04119 674 aa3.68□□□□□ -1.82
RPN3YER021W IRC10Q08118 586 aa3.68□□□□□ -1.82
RPN3YER021W MRC1P25588 1096 aa3.68□□□□□ -1.82
RPN3YER021W CDS1P38221 457 aa3.68□□□□□ -1.82
RPN3YER021W YHR097CP38809 366 aaKnown RBP3.68□□□□□ -1.82
RPN3YER021W CRG1P38892 291 aaRIP-Chip data3.68□□□□□ -1.82not detected
RPN3YER021W YJL206CP39529 758 aa3.68□□□□□ -1.82
RPN3YER021W PRM2P40534 656 aa3.68□□□□□ -1.82
RPN3YER021W YGR151CP53287 111 aa3.68□□□□□ -1.82
RPN3YER021W SPO1P53541 631 aa3.68□□□□□ -1.82
RPN3YER021W TAF3Q12297 353 aa3.68□□□□□ -1.82
RPN3YER021W RIM15P43565 1770 aa3.68□□□□□ -1.82
RPN3YER021W KIN3P22209 435 aa3.67□□□□□ -1.82
RPN3YER021W FUB1P25659 250 aa3.67□□□□□ -1.82
RPN3YER021W MTC7P32633 139 aa3.67□□□□□ -1.82
RPN3YER021W FTR1P40088 404 aa3.67□□□□□ -1.82
RPN3YER021W QRI1P43123 477 aaKnown RBP3.67□□□□□ -1.82
RPN3YER021W EAF6P47128 113 aa3.67□□□□□ -1.82
RPN3YER021W CTR1P49573 406 aa3.67□□□□□ -1.82
RPN3YER021W YDL086WQ07505 273 aa3.67□□□□□ -1.82
RPN3YER021W NGL1Q08213 363 aaKnown RBP3.67□□□□□ -1.82
RPN3YER021W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
RPN3YER021W ABF1P14164 731 aa3.66□□□□□ -1.82
RPN3YER021W TUP1P16649 713 aa3.66□□□□□ -1.82
RPN3YER021W COX11P19516 300 aaKnown RBP3.66□□□□□ -1.82
RPN3YER021W HCA4P20448 770 aaKnown RBP3.66□□□□□ -1.82
RPN3YER021W PLC1P32383 869 aa3.66□□□□□ -1.82
RPN3YER021W TFC4P33339 1025 aa3.66□□□□□ -1.82
RPN3YER021W GLG1P36143 616 aa3.66□□□□□ -1.82
RPN3YER021W YHR033WP38690 423 aa3.66□□□□□ -1.82
RPN3YER021W BDH2P39713 417 aa3.66□□□□□ -1.82
RPN3YER021W ENP2P48234 707 aaKnown RBP3.66□□□□□ -1.82
RPN3YER021W PEX14P53112 341 aa3.66□□□□□ -1.82
RPN3YER021W SPC105P53148 917 aa3.66□□□□□ -1.82
RPN3YER021W SQS1P53866 767 aaKnown RBP3.66□□□□□ -1.82
RPN3YER021W TIM50Q02776 476 aa3.66□□□□□ -1.82
RPN3YER021W IZH3Q07959 543 aa3.66□□□□□ -1.82
RPN3YER021W YRF1-4O13559 1382 aa3.66□□□□□ -1.82
RPN3YER021W RAV1P47104 1357 aa3.66□□□□□ -1.82
RPN3YER021W DGR2P32330 852 aa3.65□□□□□ -1.82
RPN3YER021W HEM12P32347 362 aaPredicted RBP3.65□□□□□ -1.82
RPN3YER021W NTH1P32356 751 aa3.65□□□□□ -1.82
RPN3YER021W KSP1P38691 1029 aaKnown RBP3.65□□□□□ -1.82
RPN3YER021W TMN3P40071 706 aa3.65□□□□□ -1.82
RPN3YER021W IRC5P43610 853 aa3.65□□□□□ -1.82
RPN3YER021W VPS73P53142 486 aaKnown RBP3.65□□□□□ -1.82
RPN3YER021W FDC1Q03034 503 aa3.65□□□□□ -1.82
RPN3YER021W ECM38Q05902 660 aaPredicted RBP3.65□□□□□ -1.82
RPN3YER021W YSH1Q06224 779 aaPredicted RBP3.65□□□□□ -1.82
RPN3YER021W SUT2Q12286 268 aa3.65□□□□□ -1.82
RPN3YER021W CDC43P18898 376 aa3.64□□□□□ -1.83
RPN3YER021W ELF1P36053 145 aa3.64□□□□□ -1.83
RPN3YER021W YKL133CP36066 463 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms