RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W PDR15Q04182 1529 aaKnown RBP4.33□□□□□ -1.72
PRE1YER012W HOT13P36078 116 aa4.33□□□□□ -1.72
PRE1YER012W NET1P47035 1189 aa4.33□□□□□ -1.72
PRE1YER012W BFA1P47113 574 aa4.33□□□□□ -1.72
PRE1YER012W STP4Q07351 490 aa4.33□□□□□ -1.72
PRE1YER012W BUD3P25558 1636 aa4.32□□□□□ -1.72
PRE1YER012W TUP1P16649 713 aa4.32□□□□□ -1.72
PRE1YER012W RPL8AP17076 256 aaKnown RBP4.32□□□□□ -1.72
PRE1YER012W MGS1P40151 587 aa4.32□□□□□ -1.72
PRE1YER012W PXA1P41909 870 aa4.32□□□□□ -1.72
PRE1YER012W YGL117WP53133 265 aa4.32□□□□□ -1.72
PRE1YER012W YOR093CQ12275 1648 aa4.32□□□□□ -1.72
PRE1YER012W TY3B-GQ99315 1547 aa4.31□□□□□ -1.72
PRE1YER012W MBR1P23493 339 aa4.31□□□□□ -1.72
PRE1YER012W PPE1P38796 400 aa4.31□□□□□ -1.72
PRE1YER012W CRG1P38892 291 aaRIP-Chip data4.31□□□□□ -1.72not detected
PRE1YER012W YJR096WP47137 282 aa4.31□□□□□ -1.72
PRE1YER012W ALG12P53730 551 aa4.31□□□□□ -1.72
PRE1YER012W IQG1Q12280 1495 aa4.3□□□□□ -1.72
PRE1YER012W NUP157P40064 1391 aaKnown RBP4.3□□□□□ -1.72
PRE1YER012W YTA7P40340 1379 aa4.3□□□□□ -1.72
PRE1YER012W CHC1P22137 1653 aaKnown RBP4.3□□□□□ -1.72
PRE1YER012W YBT1P32386 1661 aa4.3□□□□□ -1.72
PRE1YER012W RPS17AP02407 136 aaKnown RBP4.3□□□□□ -1.72
PRE1YER012W RPS17BP14127 136 aaKnown RBP4.3□□□□□ -1.72
PRE1YER012W PPG1P32838 368 aa4.3□□□□□ -1.72
PRE1YER012W RIM4P38741 713 aa4.3□□□□□ -1.72
PRE1YER012W CCT5P40413 562 aaKnown RBP4.3□□□□□ -1.72
PRE1YER012W RET2P43621 546 aa4.3□□□□□ -1.72
PRE1YER012W YIP4P53093 235 aa4.3□□□□□ -1.72
PRE1YER012W NOP15P53927 220 aaPredicted RBP4.3□□□□□ -1.72
PRE1YER012W MFM1Q02783 413 aa4.3□□□□□ -1.72
PRE1YER012W RGT2Q12300 763 aa4.3□□□□□ -1.72
PRE1YER012W FRE7Q12333 620 aa4.3□□□□□ -1.72
PRE1YER012W NOP14Q99207 810 aaKnown RBP4.3□□□□□ -1.72
PRE1YER012W LEU2P04173 364 aaPredicted RBP4.29□□□□□ -1.72
PRE1YER012W SWI6P09959 803 aa4.29□□□□□ -1.72
PRE1YER012W GLN4P13188 809 aaKnown RBP4.29□□□□□ -1.72
PRE1YER012W PRP22P24384 1145 aaKnown RBP4.29□□□□□ -1.72
PRE1YER012W SFP1P32432 683 aa4.29□□□□□ -1.72
PRE1YER012W PRP19P32523 503 aaKnown RBP4.29□□□□□ -1.72
PRE1YER012W MRPL7P36519 292 aa4.29□□□□□ -1.72
PRE1YER012W DUN1P39009 513 aa4.29□□□□□ -1.72
PRE1YER012W RNH70P53331 553 aa4.29□□□□□ -1.72
PRE1YER012W CPR8P53728 308 aa4.29□□□□□ -1.72
PRE1YER012W ADR1P07248 1323 aa4.28□□□□□ -1.72
PRE1YER012W SEC3P33332 1336 aaKnown RBP4.28□□□□□ -1.72
PRE1YER012W SSD1P24276 1250 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
PRE1YER012W CKB2P38930 258 aa4.28□□□□□ -1.72
PRE1YER012W FTR1P40088 404 aa4.28□□□□□ -1.72
PRE1YER012W LTP1P40347 161 aa4.28□□□□□ -1.72
PRE1YER012W DAK1P54838 584 aaKnown RBP4.28□□□□□ -1.72
PRE1YER012W DNM1P54861 757 aa4.28□□□□□ -1.72
PRE1YER012W STH1P32597 1359 aa4.27□□□□□ -1.73
PRE1YER012W SEC65P29478 273 aa4.27□□□□□ -1.73
PRE1YER012W PRE4P30657 266 aa4.27□□□□□ -1.73
PRE1YER012W CDS1P38221 457 aa4.27□□□□□ -1.73
PRE1YER012W YGR153WP48238 217 aa4.27□□□□□ -1.73
PRE1YER012W YGR054WP53235 642 aaKnown RBP4.27□□□□□ -1.73
PRE1YER012W SPO1P53541 631 aa4.27□□□□□ -1.73
PRE1YER012W EFR3Q03653 782 aaKnown RBP4.27□□□□□ -1.73
PRE1YER012W DNF3Q12674 1656 aa4.26□□□□□ -1.73
PRE1YER012W FAT1P38225 669 aa4.26□□□□□ -1.73
PRE1YER012W EHT1P38295 451 aa4.26□□□□□ -1.73
PRE1YER012W TAF4P50105 388 aa4.26□□□□□ -1.73
PRE1YER012W STP1Q00947 519 aa4.26□□□□□ -1.73
PRE1YER012W ZPS1Q12512 249 aa4.26□□□□□ -1.73
PRE1YER012W AQY1P0CD91 305 aa4.25□□□□□ -1.73
PRE1YER012W TYS1P36421 394 aaKnown RBP4.25□□□□□ -1.73
PRE1YER012W HXT6P39003 570 aaKnown RBP4.25□□□□□ -1.73
PRE1YER012W HXT7P39004 570 aa4.25□□□□□ -1.73
PRE1YER012W MNN1P39106 762 aa4.25□□□□□ -1.73
PRE1YER012W THI6P41835 540 aa4.25□□□□□ -1.73
PRE1YER012W RPS21AP0C0V8 87 aaKnown RBP4.24□□□□□ -1.73
PRE1YER012W PMA2P19657 947 aa4.24□□□□□ -1.73
PRE1YER012W IES1P43579 692 aa4.24□□□□□ -1.73
PRE1YER012W HLJ1P48353 224 aa4.24□□□□□ -1.73
PRE1YER012W SCS3P53012 380 aa4.24□□□□□ -1.73
PRE1YER012W ATP23P53722 227 aa4.24□□□□□ -1.73
PRE1YER012W BUD17P53727 317 aa4.24□□□□□ -1.73
PRE1YER012W ECM9Q02202 377 aa4.24□□□□□ -1.73
PRE1YER012W FDC1Q03034 503 aa4.24□□□□□ -1.73
PRE1YER012W YHM2Q04013 314 aa4.24□□□□□ -1.73
PRE1YER012W USO1P25386 1790 aa4.24□□□□□ -1.73
PRE1YER012W SEC7P11075 2009 aaKnown RBP4.24□□□□□ -1.73
PRE1YER012W TRM3Q07527 1436 aa4.23□□□□□ -1.73
PRE1YER012W CPA2P03965 1118 aaKnown RBP4.23□□□□□ -1.73
PRE1YER012W RPL7AP05737 244 aaKnown RBP4.23□□□□□ -1.73
PRE1YER012W CNE1P27825 502 aa4.23□□□□□ -1.73
PRE1YER012W RRP14P36080 434 aaKnown RBP4.23□□□□□ -1.73
PRE1YER012W YHR033WP38690 423 aa4.23□□□□□ -1.73
PRE1YER012W PIH1P38768 344 aa4.23□□□□□ -1.73
PRE1YER012W PRM2P40534 656 aa4.23□□□□□ -1.73
PRE1YER012W ULP2P40537 1034 aaPredicted RBP4.23□□□□□ -1.73
PRE1YER012W YJL043WP47053 257 aa4.23□□□□□ -1.73
PRE1YER012W YNL018CP53976 612 aa4.23□□□□□ -1.73
PRE1YER012W MPS1P54199 764 aa4.23□□□□□ -1.73
PRE1YER012W PPN1Q04119 674 aa4.23□□□□□ -1.73
PRE1YER012W FPR4Q06205 392 aaPredicted RBP4.23□□□□□ -1.73
PRE1YER012W THI73Q07904 523 aa4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 127.7 ms