RNA–Protein interactions for RNA: YDR496C

PUF6, Transcript of Pumilio-homology domain protein, yeast

Gene PUF6, Length 1,971 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUF6	YDR496C	MRP4	P32902	394 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	AFR1	P33304	620 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	BYE1	P36106	594 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	TYS1	P36421	394 aa	Known RBP	3.11	□□□□□ -1.91
PUF6	YDR496C	UGA2	P38067	497 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	CCC2	P38995	1004 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	AIM10	P39965	576 aa	Known RBP	3.11	□□□□□ -1.91
PUF6	YDR496C	SEC26	P41810	973 aa	Known RBP	3.11	□□□□□ -1.91
PUF6	YDR496C	RIM8	P53179	542 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	RTC4	P53850	401 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	ERV25	P54837	211 aa	Known RBP	3.11	□□□□□ -1.91
PUF6	YDR496C	ADA2	Q02336	434 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	HOT1	Q03213	719 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	MRD1	Q06106	887 aa	Known RBP	3.11	□□□□□ -1.91
PUF6	YDR496C	ATG26	Q06321	1198 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	TSR1	Q07381	788 aa	Known RBP	3.11	□□□□□ -1.91
PUF6	YDR496C	SLK19	Q08581	821 aa	Known RBP	3.11	□□□□□ -1.91
PUF6	YDR496C	YBL111C	Q3E7Y5	667 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	YIL002W-A	Q3E7Z5	69 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	SSM4	P40318	1319 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	PUT4	P15380	627 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	PDX1	P16451	410 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	STE11	P23561	717 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	CDC12	P32468	407 aa	Known RBP	3.11	□□□□□ -1.91
PUF6	YDR496C	NIP1	P32497	812 aa	Known RBP	3.11	□□□□□ -1.91
PUF6	YDR496C	NPL6	P32832	435 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	VPS17	P32913	551 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	MDL1	P33310	695 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	THI80	P35202	319 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	YKT6	P36015	200 aa	Known RBP	3.11	□□□□□ -1.91
PUF6	YDR496C	ERT1	P38140	529 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	AIM3	P38266	947 aa	Known RBP	3.11	□□□□□ -1.91
PUF6	YDR496C	RFC1	P38630	861 aa	Known RBP	3.11	□□□□□ -1.91
PUF6	YDR496C	KHA1	P40309	873 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	MKT1	P40850	830 aa	Known RBP	3.11	□□□□□ -1.91
PUF6	YDR496C	IRC6	P43615	237 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	AIP1	P46680	615 aa	Known RBP	3.11	□□□□□ -1.91
PUF6	YDR496C	POL31	P46957	487 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	MAD3	P47074	515 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	HSV2	P50079	448 aa	Predicted RBP	3.11	□□□□□ -1.91
PUF6	YDR496C	SHE4	P51534	789 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	NCS6	P53088	359 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	NPY1	P53164	384 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	LSC1	P53598	329 aa	Known RBP	3.11	□□□□□ -1.91
PUF6	YDR496C	YNL144C	P53907	740 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	SFB2	P53953	876 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	GTR1	Q00582	310 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	INP2	Q03824	705 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	GSF2	Q04697	403 aa	Known RBP	3.11	□□□□□ -1.91
PUF6	YDR496C	ARR1	Q06596	294 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	ARR2	Q06597	130 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	TAF3	Q12297	353 aa		3.11	□□□□□ -1.91
PUF6	YDR496C	CHC1	P22137	1653 aa	Known RBP	3.1	□□□□□ -1.91
PUF6	YDR496C	IKI3	Q06706	1349 aa	Known RBP	3.1	□□□□□ -1.91
PUF6	YDR496C	SOD2	P00447	233 aa		3.1	□□□□□ -1.91
PUF6	YDR496C	BI4	P03879	638 aa		3.1	□□□□□ -1.91
PUF6	YDR496C	ILS1	P09436	1072 aa	Known RBP	3.1	□□□□□ -1.91
PUF6	YDR496C	CLC1	P17891	233 aa		3.1	□□□□□ -1.91
PUF6	YDR496C	MNE1	P24720	663 aa		3.1	□□□□□ -1.91
PUF6	YDR496C	NPP1	P25353	742 aa		3.1	□□□□□ -1.91
PUF6	YDR496C	BUD14	P27637	709 aa		3.1	□□□□□ -1.91
PUF6	YDR496C	HSP104	P31539	908 aa	Known RBP	3.1	□□□□□ -1.91
PUF6	YDR496C	AAR2	P32357	355 aa	Predicted RBP	3.1	□□□□□ -1.91
PUF6	YDR496C	ECM4	P36156	370 aa		3.1	□□□□□ -1.91
PUF6	YDR496C	SIT1	P39980	628 aa		3.1	□□□□□ -1.91
PUF6	YDR496C	SKP2	P42843	763 aa		3.1	□□□□□ -1.91
PUF6	YDR496C	MAL11	P53048	616 aa		3.1	□□□□□ -1.91
PUF6	YDR496C	MTC3	P53077	123 aa		3.1	□□□□□ -1.91
PUF6	YDR496C	MDR1	P53258	950 aa		3.1	□□□□□ -1.91
PUF6	YDR496C	ARP5	P53946	755 aa		3.1	□□□□□ -1.91
PUF6	YDR496C	ARA2	Q04212	335 aa		3.1	□□□□□ -1.91
PUF6	YDR496C	EIS1	Q05050	843 aa	Known RBP	3.1	□□□□□ -1.91
PUF6	YDR496C	YDL124W	Q07551	312 aa	Known RBP	3.1	□□□□□ -1.91
PUF6	YDR496C	ADF1	Q2V2Q1	113 aa		3.1	□□□□□ -1.91
PUF6	YDR496C	MIS1	P09440	975 aa	Known RBP	3.09	□□□□□ -1.91
PUF6	YDR496C	MSD1	P15179	658 aa	Known RBP	3.09	□□□□□ -1.91
PUF6	YDR496C	VPS3	P23643	1011 aa		3.09	□□□□□ -1.91
PUF6	YDR496C	ITR1	P30605	584 aa		3.09	□□□□□ -1.91
PUF6	YDR496C	SEC21	P32074	935 aa	Known RBP	3.09	□□□□□ -1.91
PUF6	YDR496C	SMI1	P32566	505 aa		3.09	□□□□□ -1.91
PUF6	YDR496C	SPC29	P33419	253 aa		3.09	□□□□□ -1.91
PUF6	YDR496C	MTH1	P35198	433 aa		3.09	□□□□□ -1.91
PUF6	YDR496C	SWH1	P35845	1188 aa		3.09	□□□□□ -1.91
PUF6	YDR496C	TAF5	P38129	798 aa		3.09	□□□□□ -1.91
PUF6	YDR496C	PSY4	P38193	441 aa		3.09	□□□□□ -1.91
PUF6	YDR496C	YLF2	P38746	405 aa		3.09	□□□□□ -1.91
PUF6	YDR496C	STL1	P39932	569 aa		3.09	□□□□□ -1.91
PUF6	YDR496C	SAH1	P39954	449 aa	Known RBP	3.09	□□□□□ -1.91
PUF6	YDR496C	GDI1	P39958	451 aa	Known RBP	3.09	□□□□□ -1.91
PUF6	YDR496C	NPP2	P39997	493 aa		3.09	□□□□□ -1.91
PUF6	YDR496C	NOP16	P40007	231 aa	Known RBP	3.09	□□□□□ -1.91
PUF6	YDR496C	TPA1	P40032	644 aa	Known RBP	3.09	□□□□□ -1.91
PUF6	YDR496C	YIL161W	P40449	235 aa	Known RBP	3.09	□□□□□ -1.91
PUF6	YDR496C	SEC28	P40509	296 aa	Known RBP	3.09	□□□□□ -1.91
PUF6	YDR496C	YGR266W	P53326	701 aa		3.09	□□□□□ -1.91
PUF6	YDR496C	PEX25	Q02969	394 aa		3.09	□□□□□ -1.91
PUF6	YDR496C	NOP6	Q07623	225 aa	Known RBP	3.09	□□□□□ -1.91
PUF6	YDR496C	RTC5	Q12108	567 aa	Known RBP	3.09	□□□□□ -1.91
PUF6	YDR496C	YPR071W	Q12346	211 aa		3.09	□□□□□ -1.91
PUF6	YDR496C	ISA2	Q12425	185 aa		3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 89.1 ms