RNA–Protein interactions for RNA: YDR405W

MRP20, Transcript of Mitochondrial ribosomal protein of the large subunit, yeast

Gene MRP20, Length 792 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRP20	YDR405W	GRX8	Q05926	109 aa		10.35	□□□□□ -0.75
MRP20	YDR405W	SFI1	Q12369	946 aa		10.35	□□□□□ -0.75
MRP20	YDR405W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	10.34	□□□□□ -0.75	not detected
MRP20	YDR405W	KIN3	P22209	435 aa		10.34	□□□□□ -0.75
MRP20	YDR405W	SEC6	P32844	805 aa		10.34	□□□□□ -0.75
MRP20	YDR405W	FUI1	P38196	639 aa		10.34	□□□□□ -0.75
MRP20	YDR405W	RRT2	P38332	387 aa		10.34	□□□□□ -0.75
MRP20	YDR405W	TIF5	P38431	405 aa	Known RBP	10.34	□□□□□ -0.75
MRP20	YDR405W	FSH1	P38777	243 aa	Known RBP	10.34	□□□□□ -0.75
MRP20	YDR405W	HEM14	P40012	539 aa		10.34	□□□□□ -0.75
MRP20	YDR405W	ELP3	Q02908	557 aa	Known RBP	10.34	□□□□□ -0.75
MRP20	YDR405W	YPR084W	Q06821	456 aa		10.34	□□□□□ -0.75
MRP20	YDR405W	YLR012C	Q07927	99 aa		10.34	□□□□□ -0.75
MRP20	YDR405W	CET1	O13297	549 aa	Predicted RBP	10.33	□□□□□ -0.76
MRP20	YDR405W	PET111	P08468	800 aa		10.33	□□□□□ -0.76
MRP20	YDR405W	PMS1	P14242	873 aa		10.33	□□□□□ -0.76
MRP20	YDR405W	CKI1	P20485	582 aa		10.33	□□□□□ -0.76
MRP20	YDR405W	MRM1	P25270	412 aa		10.33	□□□□□ -0.76
MRP20	YDR405W	NMD3	P38861	518 aa	Known RBP	10.33	□□□□□ -0.76
MRP20	YDR405W	FMO1	P38866	432 aa		10.33	□□□□□ -0.76
MRP20	YDR405W	CAJ1	P39101	391 aa		10.33	□□□□□ -0.76
MRP20	YDR405W	VAC8	P39968	578 aa		10.33	□□□□□ -0.76
MRP20	YDR405W	BST1	P43571	1029 aa		10.33	□□□□□ -0.76
MRP20	YDR405W	PRP24	P49960	444 aa	Known RBP	10.33	□□□□□ -0.76
MRP20	YDR405W	YNL144C	P53907	740 aa		10.33	□□□□□ -0.76
MRP20	YDR405W	YNL040W	P53960	456 aa	Predicted RBP	10.33	□□□□□ -0.76
MRP20	YDR405W	KAP95	Q06142	861 aa	Known RBP	10.33	□□□□□ -0.76
MRP20	YDR405W	YOR387C	Q08910	206 aa		10.33	□□□□□ -0.76
MRP20	YDR405W	FPR1	P20081	114 aa	Known RBP	10.32	□□□□□ -0.76
MRP20	YDR405W	STO1	P34160	861 aa	Known RBP	10.32	□□□□□ -0.76
MRP20	YDR405W	YBL055C	P34220	418 aa	Predicted RBP	10.32	□□□□□ -0.76
MRP20	YDR405W	RCK2	P38623	610 aa		10.32	□□□□□ -0.76
MRP20	YDR405W	HXT5	P38695	592 aa		10.32	□□□□□ -0.76
MRP20	YDR405W	LSB3	P43603	459 aa	Known RBP	10.32	□□□□□ -0.76
MRP20	YDR405W	OSW7	P43611	510 aa		10.32	□□□□□ -0.76
MRP20	YDR405W	MNN11	P46985	422 aa	Known RBP	10.32	□□□□□ -0.76
MRP20	YDR405W	VPS60	Q03390	229 aa		10.32	□□□□□ -0.76
MRP20	YDR405W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	10.32	□□□□□ -0.76	not detected
MRP20	YDR405W	YLR462W	O13556	202 aa		10.31	□□□□□ -0.76
MRP20	YDR405W	HIS1	P00498	297 aa	Known RBP	10.31	□□□□□ -0.76
MRP20	YDR405W	TUB3	P09734	445 aa	Known RBP	10.31	□□□□□ -0.76
MRP20	YDR405W	CAP1	P28495	268 aa	Known RBP	10.31	□□□□□ -0.76
MRP20	YDR405W	SWE1	P32944	819 aa		10.31	□□□□□ -0.76
MRP20	YDR405W	CSE1	P33307	960 aa		10.31	□□□□□ -0.76
MRP20	YDR405W	YHL049C	P38722	271 aa		10.31	□□□□□ -0.76
MRP20	YDR405W	EDC3	P39998	551 aa	Known RBP	10.31	□□□□□ -0.76
MRP20	YDR405W	KHA1	P40309	873 aa		10.31	□□□□□ -0.76
MRP20	YDR405W	YFL064C	P43540	174 aa		10.31	□□□□□ -0.76
MRP20	YDR405W	YNR065C	P53751	1116 aa		10.31	□□□□□ -0.76
MRP20	YDR405W	YMR206W	Q03695	313 aa		10.31	□□□□□ -0.76
MRP20	YDR405W	ARA2	Q04212	335 aa		10.31	□□□□□ -0.76
MRP20	YDR405W	THI7	Q05998	598 aa		10.31	□□□□□ -0.76
MRP20	YDR405W	TPO1	Q07824	586 aa		10.31	□□□□□ -0.76
MRP20	YDR405W	CLP1	Q08685	445 aa	Predicted RBP	10.31	□□□□□ -0.76
MRP20	YDR405W	YBL111C	Q3E7Y5	667 aa		10.31	□□□□□ -0.76
MRP20	YDR405W	MEX67	Q99257	599 aa	Known RBP	10.31	□□□□□ -0.76
MRP20	YDR405W	MIS1	P09440	975 aa	Known RBP	10.3	□□□□□ -0.76
MRP20	YDR405W	MET16	P18408	261 aa	Predicted RBP	10.3	□□□□□ -0.76
MRP20	YDR405W	LTV1	P34078	463 aa		10.3	□□□□□ -0.76
MRP20	YDR405W	PCA1	P38360	1216 aa		10.3	□□□□□ -0.76
MRP20	YDR405W	EXO1	P39875	702 aa		10.3	□□□□□ -0.76
MRP20	YDR405W	OSW5	P40219	148 aa		10.3	□□□□□ -0.76
MRP20	YDR405W	ERG10	P41338	398 aa	Known RBP	10.3	□□□□□ -0.76
MRP20	YDR405W	YJL132W	P47014	750 aa		10.3	□□□□□ -0.76
MRP20	YDR405W	NOG2	P53742	486 aa	Known RBP	10.3	□□□□□ -0.76
MRP20	YDR405W	YNR061C	P53747	219 aa		10.3	□□□□□ -0.76
MRP20	YDR405W	YLR001C	Q07895	862 aa		10.3	□□□□□ -0.76
MRP20	YDR405W	GPM3	Q12326	303 aa		10.3	□□□□□ -0.76
MRP20	YDR405W	IZH4	Q99393	312 aa		10.3	□□□□□ -0.76
MRP20	YDR405W	HOM2	P13663	365 aa	Known RBP	10.29	□□□□□ -0.76
MRP20	YDR405W	SFL1	P20134	766 aa		10.29	□□□□□ -0.76
MRP20	YDR405W	HCM1	P25364	564 aa		10.29	□□□□□ -0.76
MRP20	YDR405W	MET22	P32179	357 aa		10.29	□□□□□ -0.76
MRP20	YDR405W	TYE7	P33122	291 aa	Predicted RBP	10.29	□□□□□ -0.76
MRP20	YDR405W	KAP104	P38217	918 aa	Known RBP	10.29	□□□□□ -0.76
MRP20	YDR405W	URA8	P38627	578 aa	Predicted RBP	10.29	□□□□□ -0.76
MRP20	YDR405W	DUN1	P39009	513 aa		10.29	□□□□□ -0.76
MRP20	YDR405W	LCP5	P40079	357 aa	Predicted RBP	10.29	□□□□□ -0.76
MRP20	YDR405W	SEC9	P40357	651 aa		10.29	□□□□□ -0.76
MRP20	YDR405W	ARG2	P40360	574 aa		10.29	□□□□□ -0.76
MRP20	YDR405W	UBP7	P40453	1071 aa		10.29	□□□□□ -0.76
MRP20	YDR405W	BRO1	P48582	844 aa		10.29	□□□□□ -0.76
MRP20	YDR405W	APT1	P49435	187 aa	Known RBP	10.29	□□□□□ -0.76
MRP20	YDR405W	UFO1	Q04511	668 aa		10.29	□□□□□ -0.76
MRP20	YDR405W	YSH1	Q06224	779 aa	Predicted RBP	10.29	□□□□□ -0.76
MRP20	YDR405W	VAC14	Q06708	880 aa		10.29	□□□□□ -0.76
MRP20	YDR405W	CCH1	P50077	2039 aa		10.29	□□□□□ -0.76
MRP20	YDR405W	PYC1	P11154	1178 aa	Known RBP	10.28	□□□□□ -0.76
MRP20	YDR405W	MEI4	P29467	408 aa		10.28	□□□□□ -0.76
MRP20	YDR405W	AIM18	P38884	321 aa		10.28	□□□□□ -0.76
MRP20	YDR405W	RMD8	P43620	662 aa		10.28	□□□□□ -0.76
MRP20	YDR405W	SNG1	P46950	547 aa		10.28	□□□□□ -0.76
MRP20	YDR405W	TAN1	P53072	289 aa	Predicted RBP	10.28	□□□□□ -0.76
MRP20	YDR405W	FLC3	P53121	802 aa		10.28	□□□□□ -0.76
MRP20	YDR405W	TRM112	P53738	135 aa	Predicted RBP	10.28	□□□□□ -0.76
MRP20	YDR405W	FAP1	P53971	965 aa		10.28	□□□□□ -0.76
MRP20	YDR405W	VPS9	P54787	451 aa		10.28	□□□□□ -0.76
MRP20	YDR405W	INP2	Q03824	705 aa		10.28	□□□□□ -0.76
MRP20	YDR405W	APL5	Q08951	932 aa	Known RBP	10.28	□□□□□ -0.76
MRP20	YDR405W	ECM32	P32644	1121 aa	Known RBP	10.27	□□□□□ -0.77

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms