RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W CDC16P09798 840 aa1.49□□□□□ -2.17
MSN5YDR335W STE12P13574 688 aa1.49□□□□□ -2.17
MSN5YDR335W GFA1P14742 717 aaKnown RBP1.49□□□□□ -2.17
MSN5YDR335W MET8P15807 274 aa1.49□□□□□ -2.17
MSN5YDR335W THR1P17423 357 aaKnown RBP1.49□□□□□ -2.17
MSN5YDR335W DBP5P20449 482 aaKnown RBP1.49□□□□□ -2.17
MSN5YDR335W ADH7P25377 361 aa1.49□□□□□ -2.17
MSN5YDR335W KRR1P25586 316 aaPredicted RBP1.49□□□□□ -2.17
MSN5YDR335W GCD7P32502 381 aaPredicted RBP1.49□□□□□ -2.17
MSN5YDR335W SET3P36124 751 aa1.49□□□□□ -2.17
MSN5YDR335W YBL029WP38201 376 aa1.49□□□□□ -2.17
MSN5YDR335W REG2P38232 338 aa1.49□□□□□ -2.17
MSN5YDR335W ATF1P40353 525 aa1.49□□□□□ -2.17
MSN5YDR335W EFM4P40516 257 aa1.49□□□□□ -2.17
MSN5YDR335W YGR045CP53229 120 aa1.49□□□□□ -2.17
MSN5YDR335W PRP3Q03338 469 aaPredicted RBP1.49□□□□□ -2.17
MSN5YDR335W YMR210WQ03649 449 aa1.49□□□□□ -2.17
MSN5YDR335W YDR131CQ03899 556 aa1.49□□□□□ -2.17
MSN5YDR335W ARA2Q04212 335 aa1.49□□□□□ -2.17
MSN5YDR335W YPL277CQ08989 487 aa1.49□□□□□ -2.17
MSN5YDR335W CEX1Q12453 761 aa1.49□□□□□ -2.17
MSN5YDR335W RPS4AP0CX35 261 aaKnown RBP1.49□□□□□ -2.17
MSN5YDR335W RPS4BP0CX36 261 aaKnown RBP1.49□□□□□ -2.17
MSN5YDR335W ADH4P10127 382 aa1.49□□□□□ -2.17
MSN5YDR335W HSC82P15108 705 aaKnown RBP1.49□□□□□ -2.17
MSN5YDR335W MER1P16523 270 aa1.49□□□□□ -2.17
MSN5YDR335W CDC42P19073 191 aa1.49□□□□□ -2.17
MSN5YDR335W RIT1P23796 513 aa1.49□□□□□ -2.17
MSN5YDR335W EFT1P32324 842 aaKnown RBP1.49□□□□□ -2.17
MSN5YDR335W FAT1P38225 669 aa1.49□□□□□ -2.17
MSN5YDR335W RTT105P40063 208 aa1.49□□□□□ -2.17
MSN5YDR335W PCL7P40186 285 aa1.49□□□□□ -2.17
MSN5YDR335W VID28P40547 921 aa1.49□□□□□ -2.17
MSN5YDR335W GCV2P49095 1034 aa1.49□□□□□ -2.17
MSN5YDR335W CEG1Q01159 459 aaPredicted RBP1.49□□□□□ -2.17
MSN5YDR335W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.49□□□□□ -2.17not detected
MSN5YDR335W PEX25Q02969 394 aa1.49□□□□□ -2.17
MSN5YDR335W PKH1Q03407 766 aa1.49□□□□□ -2.17
MSN5YDR335W UTP21Q06078 939 aaPredicted RBP1.49□□□□□ -2.17
MSN5YDR335W XYL2Q07993 356 aa1.49□□□□□ -2.17
MSN5YDR335W CUE5Q08412 411 aaKnown RBP1.49□□□□□ -2.17
MSN5YDR335W PCL8Q08966 492 aa1.49□□□□□ -2.17
MSN5YDR335W KCS1Q12494 1050 aa1.49□□□□□ -2.17
MSN5YDR335W YBR126W-AQ8TGU7 68 aa1.49□□□□□ -2.17
MSN5YDR335W TY3B-IQ7LHG5 1498 aaKnown RBP1.49□□□□□ -2.17
MSN5YDR335W SNF1P06782 633 aaKnown RBP1.48□□□□□ -2.17
MSN5YDR335W ATP12P22135 325 aa1.48□□□□□ -2.17
MSN5YDR335W POL4P25615 582 aa1.48□□□□□ -2.17
MSN5YDR335W HXT4P32467 576 aa1.48□□□□□ -2.17
MSN5YDR335W PET309P32522 965 aaPredicted RBP1.48□□□□□ -2.17
MSN5YDR335W YKL100CP34248 587 aa1.48□□□□□ -2.17
MSN5YDR335W YKR073CP36153 106 aa1.48□□□□□ -2.17
MSN5YDR335W IFA38P38286 347 aa1.48□□□□□ -2.17
MSN5YDR335W ETP1P38748 585 aaKnown RBP1.48□□□□□ -2.17
MSN5YDR335W PIK1P39104 1066 aa1.48□□□□□ -2.17
MSN5YDR335W YAR028WP39548 234 aa1.48□□□□□ -2.17
MSN5YDR335W SEC28P40509 296 aaKnown RBP1.48□□□□□ -2.17
MSN5YDR335W SAP155P43612 1002 aa1.48□□□□□ -2.17
MSN5YDR335W DSD1P53095 428 aa1.48□□□□□ -2.17
MSN5YDR335W CUL3P53202 744 aa1.48□□□□□ -2.17
MSN5YDR335W RRP46P53256 223 aaPredicted RBP1.48□□□□□ -2.17
MSN5YDR335W HST1P53685 503 aa1.48□□□□□ -2.17
MSN5YDR335W VID22Q05934 901 aa1.48□□□□□ -2.17
MSN5YDR335W NGL1Q08213 363 aaKnown RBP1.48□□□□□ -2.17
MSN5YDR335W PGC1Q08959 321 aa1.48□□□□□ -2.17
MSN5YDR335W LEU2P04173 364 aaPredicted RBP1.48□□□□□ -2.17
MSN5YDR335W PMS1P14242 873 aa1.48□□□□□ -2.17
MSN5YDR335W REC107P21651 314 aa1.48□□□□□ -2.17
MSN5YDR335W SGF29P25554 259 aa1.48□□□□□ -2.17
MSN5YDR335W SRP101P32916 621 aa1.48□□□□□ -2.17
MSN5YDR335W RIB7P33312 244 aa1.48□□□□□ -2.17
MSN5YDR335W YKR051WP36142 418 aa1.48□□□□□ -2.17
MSN5YDR335W SRO77P38163 1010 aa1.48□□□□□ -2.17
MSN5YDR335W SAF1P38352 637 aa1.48□□□□□ -2.17
MSN5YDR335W YHR097CP38809 366 aaKnown RBP1.48□□□□□ -2.17
MSN5YDR335W TPA1P40032 644 aaKnown RBP1.48□□□□□ -2.17
MSN5YDR335W ASG1P40467 964 aa1.48□□□□□ -2.17
MSN5YDR335W RLP7P40693 322 aaKnown RBP1.48□□□□□ -2.17
MSN5YDR335W SGF73P53165 657 aa1.48□□□□□ -2.17
MSN5YDR335W YGR283CP53336 341 aaPredicted RBP1.48□□□□□ -2.17
MSN5YDR335W SPO1P53541 631 aa1.48□□□□□ -2.17
MSN5YDR335W OAZ1Q02803 292 aa1.48□□□□□ -2.17
MSN5YDR335W CLP1Q08685 445 aaPredicted RBP1.48□□□□□ -2.17
MSN5YDR335W TRE1Q08919 783 aa1.48□□□□□ -2.17
MSN5YDR335W PCD1Q12524 340 aa1.48□□□□□ -2.17
MSN5YDR335W PDR5P33302 1511 aaKnown RBP1.48□□□□□ -2.17
MSN5YDR335W BET2P20133 325 aa1.48□□□□□ -2.17
MSN5YDR335W RPC53P25441 422 aa1.48□□□□□ -2.17
MSN5YDR335W YCL049CP25577 312 aa1.48□□□□□ -2.17
MSN5YDR335W PPQ1P32945 549 aa1.48□□□□□ -2.17
MSN5YDR335W MUP3P38734 546 aa1.48□□□□□ -2.17
MSN5YDR335W YER158CP40095 573 aa1.48□□□□□ -2.17
MSN5YDR335W CAF16P43569 289 aa1.48□□□□□ -2.17
MSN5YDR335W EPL1P43572 832 aa1.48□□□□□ -2.17
MSN5YDR335W DUO1P53168 247 aaKnown RBP1.48□□□□□ -2.17
MSN5YDR335W BSC5P53755 489 aa1.48□□□□□ -2.17
MSN5YDR335W JJJ1P53863 590 aa1.48□□□□□ -2.17
MSN5YDR335W GPD1Q00055 391 aaKnown RBP1.48□□□□□ -2.17
MSN5YDR335W REX3Q12090 404 aa1.48□□□□□ -2.17
MSN5YDR335W YLR122CQ12312 125 aa1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms