RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeastyeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BFR2YDR299W RPN4Q03465 531 aa1.35□□□□□ -2.19
BFR2YDR299W WAR1Q03631 944 aa1.35□□□□□ -2.19
BFR2YDR299W YLR111WQ12528 110 aa1.35□□□□□ -2.19
BFR2YDR299W RPS17AP02407 136 aaKnown RBP1.34□□□□□ -2.19
BFR2YDR299W RPS17BP14127 136 aaKnown RBP1.34□□□□□ -2.19
BFR2YDR299W PRE4P30657 266 aa1.34□□□□□ -2.19
BFR2YDR299W MGM1P32266 881 aa1.34□□□□□ -2.19
BFR2YDR299W BRN1P38170 754 aa1.34□□□□□ -2.19
BFR2YDR299W TDA3P38758 523 aa1.34□□□□□ -2.19
BFR2YDR299W ENP2P48234 707 aaKnown RBP1.34□□□□□ -2.19
BFR2YDR299W TAF4P50105 388 aa1.34□□□□□ -2.19
BFR2YDR299W RPS15Q01855 142 aaKnown RBP1.34□□□□□ -2.19
BFR2YDR299W STP4Q07351 490 aa1.34□□□□□ -2.19
BFR2YDR299W SNA4Q07549 140 aa1.34□□□□□ -2.19
BFR2YDR299W BUD7Q08754 746 aa1.34□□□□□ -2.19
BFR2YDR299W HOP1P20050 605 aa1.33□□□□□ -2.2
BFR2YDR299W CAP1P28495 268 aaKnown RBP1.33□□□□□ -2.2
BFR2YDR299W CCL1P37366 393 aa1.33□□□□□ -2.2
BFR2YDR299W EHT1P38295 451 aa1.33□□□□□ -2.2
BFR2YDR299W YHR033WP38690 423 aa1.33□□□□□ -2.2
BFR2YDR299W YIR016WP40572 265 aa1.33□□□□□ -2.2
BFR2YDR299W SAP4P53036 818 aa1.33□□□□□ -2.2
BFR2YDR299W NOP15P53927 220 aaPredicted RBP1.33□□□□□ -2.2
BFR2YDR299W HLR1Q04429 423 aa1.33□□□□□ -2.2
BFR2YDR299W POB3Q04636 552 aaKnown RBP1.33□□□□□ -2.2
BFR2YDR299W NTG2Q08214 380 aa1.33□□□□□ -2.2
BFR2YDR299W NDD1Q08887 554 aa1.33□□□□□ -2.2
BFR2YDR299W AIM41Q12032 185 aa1.33□□□□□ -2.2
BFR2YDR299W AHA1Q12449 350 aaKnown RBP1.33□□□□□ -2.2
BFR2YDR299W YOR111WQ99210 232 aa1.33□□□□□ -2.2
BFR2YDR299W YTA7P40340 1379 aa1.33□□□□□ -2.2
BFR2YDR299W ATO2P32907 282 aa1.33□□□□□ -2.2
BFR2YDR299W OAF1P39720 1047 aaPredicted RBP1.33□□□□□ -2.2
BFR2YDR299W PRM2P40534 656 aa1.33□□□□□ -2.2
BFR2YDR299W TDA10P42938 290 aa1.33□□□□□ -2.2
BFR2YDR299W RET2P43621 546 aa1.33□□□□□ -2.2
BFR2YDR299W IRC7P43623 340 aa1.33□□□□□ -2.2
BFR2YDR299W MET13P53128 600 aa1.33□□□□□ -2.2
BFR2YDR299W COP1P53622 1201 aaKnown RBP1.33□□□□□ -2.2
BFR2YDR299W NSE5Q03718 556 aa1.33□□□□□ -2.2
BFR2YDR299W UTP14Q04500 899 aaKnown RBP1.33□□□□□ -2.2
BFR2YDR299W SPN1Q06505 410 aaPredicted RBP1.33□□□□□ -2.2
BFR2YDR299W YCG1Q06680 1035 aa1.33□□□□□ -2.2
BFR2YDR299W PCL8Q08966 492 aa1.33□□□□□ -2.2
BFR2YDR299W PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.33□□□□□ -2.2not detected
BFR2YDR299W SWI6P09959 803 aa1.32□□□□□ -2.2
BFR2YDR299W YEL076C-AP0CX16 216 aa1.32□□□□□ -2.2
BFR2YDR299W YLR464WP0CX17 216 aa1.32□□□□□ -2.2
BFR2YDR299W COQ3P27680 312 aa1.32□□□□□ -2.2
BFR2YDR299W SCO2P38072 301 aa1.32□□□□□ -2.2
BFR2YDR299W OCA5P38738 679 aa1.32□□□□□ -2.2
BFR2YDR299W YEL076CP39971 216 aa1.32□□□□□ -2.2
BFR2YDR299W CFD1P40558 293 aa1.32□□□□□ -2.2
BFR2YDR299W BUD6P41697 788 aa1.32□□□□□ -2.2
BFR2YDR299W SAE2P46946 345 aa1.32□□□□□ -2.2
BFR2YDR299W YGR153WP48238 217 aa1.32□□□□□ -2.2
BFR2YDR299W LYS20P48570 428 aaKnown RBP1.32□□□□□ -2.2
BFR2YDR299W YLR001CQ07895 862 aa1.32□□□□□ -2.2
BFR2YDR299W YER190C-BP0CX94 160 aa1.31□□□□□ -2.2
BFR2YDR299W YEL077W-AP0CX95 160 aa1.31□□□□□ -2.2
BFR2YDR299W YGR296C-BP0CX96 160 aa1.31□□□□□ -2.2
BFR2YDR299W YPL283W-BP0CX97 160 aa1.31□□□□□ -2.2
BFR2YDR299W YPR204C-AP0CX98 160 aa1.31□□□□□ -2.2
BFR2YDR299W GLN4P13188 809 aaKnown RBP1.31□□□□□ -2.2
BFR2YDR299W SEC65P29478 273 aa1.31□□□□□ -2.2
BFR2YDR299W RPT3P33298 428 aaKnown RBP1.31□□□□□ -2.2
BFR2YDR299W CDS1P38221 457 aa1.31□□□□□ -2.2
BFR2YDR299W MTG2P38860 518 aa1.31□□□□□ -2.2
BFR2YDR299W MDV1P47025 714 aa1.31□□□□□ -2.2
BFR2YDR299W SDA1P53313 767 aaKnown RBP1.31□□□□□ -2.2
BFR2YDR299W TFB2Q02939 513 aa1.31□□□□□ -2.2
BFR2YDR299W SNU56Q03782 492 aaKnown RBP1.31□□□□□ -2.2
BFR2YDR299W CYK3Q07533 885 aa1.31□□□□□ -2.2
BFR2YDR299W SRL1Q08673 210 aa1.31□□□□□ -2.2
BFR2YDR299W YPK1P12688 680 aaKnown RBP1.3□□□□□ -2.2
BFR2YDR299W BET2P20133 325 aa1.3□□□□□ -2.2
BFR2YDR299W YCP4P25349 247 aaKnown RBP1.3□□□□□ -2.2
BFR2YDR299W RRP14P36080 434 aaKnown RBP1.3□□□□□ -2.2
BFR2YDR299W YPT10P38146 199 aa1.3□□□□□ -2.2
BFR2YDR299W NMD2P38798 1089 aaKnown RBP1.3□□□□□ -2.2
BFR2YDR299W FPR3P38911 411 aaKnown RBP1.3□□□□□ -2.2
BFR2YDR299W LRO1P40345 661 aa1.3□□□□□ -2.2
BFR2YDR299W IES1P43579 692 aa1.3□□□□□ -2.2
BFR2YDR299W BOP3P53958 396 aa1.3□□□□□ -2.2
BFR2YDR299W RPL15BP54780 204 aaPredicted RBP1.3□□□□□ -2.2
BFR2YDR299W AAT1Q01802 451 aa1.3□□□□□ -2.2
BFR2YDR299W USA1Q03714 838 aa1.3□□□□□ -2.2
BFR2YDR299W SCW10Q04951 389 aa1.3□□□□□ -2.2
BFR2YDR299W HRD3Q05787 833 aa1.3□□□□□ -2.2
BFR2YDR299W GRS2Q06817 618 aa1.3□□□□□ -2.2
BFR2YDR299W DSE3Q08729 430 aa1.3□□□□□ -2.2
BFR2YDR299W MRN1Q08925 612 aaKnown RBP RIP-Chip data1.3□□□□□ -2.2not detected
BFR2YDR299W PNO1Q99216 274 aaKnown RBP1.3□□□□□ -2.2
BFR2YDR299W AAC1P04710 309 aa1.29□□□□□ -2.2
BFR2YDR299W ILS1P09436 1072 aaKnown RBP1.29□□□□□ -2.2
BFR2YDR299W PCK1P10963 549 aa1.29□□□□□ -2.2
BFR2YDR299W HMG2P12684 1045 aa1.29□□□□□ -2.2
BFR2YDR299W YJU2P28320 278 aaPredicted RBP1.29□□□□□ -2.2
BFR2YDR299W PRP19P32523 503 aaKnown RBP1.29□□□□□ -2.2
BFR2YDR299W GND1P38720 489 aaKnown RBP1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms