RNA–Protein interactions for RNA: YDR261W-A

YDR261W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR261W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261W-AYDR261W-A ZPS1Q12512 249 aa4.45□□□□□ -1.7
YDR261W-AYDR261W-A TSR4P25040 408 aa4.44□□□□□ -1.7
YDR261W-AYDR261W-A GRX4P32642 244 aa4.44□□□□□ -1.7
YDR261W-AYDR261W-A RIM4P38741 713 aa4.44□□□□□ -1.7
YDR261W-AYDR261W-A LRO1P40345 661 aa4.44□□□□□ -1.7
YDR261W-AYDR261W-A ATG36P46983 293 aa4.44□□□□□ -1.7
YDR261W-AYDR261W-A PIP2P52960 996 aa4.44□□□□□ -1.7
YDR261W-AYDR261W-A BUD17P53727 317 aa4.44□□□□□ -1.7
YDR261W-AYDR261W-A YNL018CP53976 612 aa4.44□□□□□ -1.7
YDR261W-AYDR261W-A PMA2P19657 947 aa4.43□□□□□ -1.7
YDR261W-AYDR261W-A HOP1P20050 605 aa4.43□□□□□ -1.7
YDR261W-AYDR261W-A RPS15Q01855 142 aaKnown RBP4.43□□□□□ -1.7
YDR261W-AYDR261W-A SEG1Q04279 960 aa4.43□□□□□ -1.7
YDR261W-AYDR261W-A AFT2Q08957 416 aa4.43□□□□□ -1.7
YDR261W-AYDR261W-A TUF1P02992 437 aaKnown RBP4.42□□□□□ -1.7
YDR261W-AYDR261W-A CPA2P03965 1118 aaKnown RBP4.42□□□□□ -1.7
YDR261W-AYDR261W-A NUP1P20676 1076 aa4.42□□□□□ -1.7
YDR261W-AYDR261W-A YPT10P38146 199 aa4.42□□□□□ -1.7
YDR261W-AYDR261W-A SRP68P38687 599 aaKnown RBP4.42□□□□□ -1.7
YDR261W-AYDR261W-A SNM1P40993 198 aa4.42□□□□□ -1.7
YDR261W-AYDR261W-A SLD3P53135 668 aa4.42□□□□□ -1.7
YDR261W-AYDR261W-A YDL073WQ07454 984 aa4.42□□□□□ -1.7
YDR261W-AYDR261W-A TMA17Q12513 150 aa4.42□□□□□ -1.7
YDR261W-AYDR261W-A AI5_ALPHAQ9ZZX1 630 aa4.42□□□□□ -1.7
YDR261W-AYDR261W-A PGK1P00560 416 aaKnown RBP4.41□□□□□ -1.7
YDR261W-AYDR261W-A HOT13P36078 116 aa4.41□□□□□ -1.7
YDR261W-AYDR261W-A NIT2P47016 307 aa4.41□□□□□ -1.7
YDR261W-AYDR261W-A MDR1P53258 950 aa4.41□□□□□ -1.7
YDR261W-AYDR261W-A COQ6P53318 479 aa4.41□□□□□ -1.7
YDR261W-AYDR261W-A RPL7AP05737 244 aaKnown RBP4.4□□□□□ -1.71
YDR261W-AYDR261W-A YEL076C-AP0CX16 216 aa4.4□□□□□ -1.71
YDR261W-AYDR261W-A YLR464WP0CX17 216 aa4.4□□□□□ -1.71
YDR261W-AYDR261W-A SEC12P11655 471 aa4.4□□□□□ -1.71
YDR261W-AYDR261W-A COX11P19516 300 aaKnown RBP4.4□□□□□ -1.71
YDR261W-AYDR261W-A APN1P22936 367 aa4.4□□□□□ -1.71
YDR261W-AYDR261W-A MBR1P23493 339 aa4.4□□□□□ -1.71
YDR261W-AYDR261W-A CAP1P28495 268 aaKnown RBP4.4□□□□□ -1.71
YDR261W-AYDR261W-A YBR071WP38243 211 aa4.4□□□□□ -1.71
YDR261W-AYDR261W-A YEL076CP39971 216 aa4.4□□□□□ -1.71
YDR261W-AYDR261W-A EMP65P40085 556 aa4.4□□□□□ -1.71
YDR261W-AYDR261W-A IRC5P43610 853 aa4.4□□□□□ -1.71
YDR261W-AYDR261W-A BNA3P47039 444 aaKnown RBP4.4□□□□□ -1.71
YDR261W-AYDR261W-A PEF1P53238 335 aa4.4□□□□□ -1.71
YDR261W-AYDR261W-A USA1Q03714 838 aa4.4□□□□□ -1.71
YDR261W-AYDR261W-A TGS1Q12052 315 aa4.4□□□□□ -1.71
YDR261W-AYDR261W-A RPL7BQ12213 244 aaKnown RBP4.4□□□□□ -1.71
YDR261W-AYDR261W-A WHI2P12611 486 aa4.39□□□□□ -1.71
YDR261W-AYDR261W-A VPS33P20795 691 aa4.39□□□□□ -1.71
YDR261W-AYDR261W-A YJL193WP39542 402 aa4.39□□□□□ -1.71
YDR261W-AYDR261W-A YOR378WQ08902 515 aa4.39□□□□□ -1.71
YDR261W-AYDR261W-A CWC2Q12046 339 aaPredicted RBP4.39□□□□□ -1.71
YDR261W-AYDR261W-A AQY1P0CD91 305 aa4.38□□□□□ -1.71
YDR261W-AYDR261W-A PCK1P10963 549 aa4.38□□□□□ -1.71
YDR261W-AYDR261W-A KAR1P11927 433 aa4.38□□□□□ -1.71
YDR261W-AYDR261W-A LOT5P34234 306 aa4.38□□□□□ -1.71
YDR261W-AYDR261W-A CCL1P37366 393 aa4.38□□□□□ -1.71
YDR261W-AYDR261W-A XBP1P40489 647 aa4.38□□□□□ -1.71
YDR261W-AYDR261W-A YJR120WP47157 116 aa4.38□□□□□ -1.71
YDR261W-AYDR261W-A SAP4P53036 818 aa4.38□□□□□ -1.71
YDR261W-AYDR261W-A HOL1P53389 586 aa4.38□□□□□ -1.71
YDR261W-AYDR261W-A VPS5Q92331 675 aa4.38□□□□□ -1.71
YDR261W-AYDR261W-A EXO1P39875 702 aa4.37□□□□□ -1.71
YDR261W-AYDR261W-A YFL015CP43578 164 aa4.37□□□□□ -1.71
YDR261W-AYDR261W-A GFD1Q04839 188 aaKnown RBP4.37□□□□□ -1.71
YDR261W-AYDR261W-A MRN1Q08925 612 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
YDR261W-AYDR261W-A FRE7Q12333 620 aa4.37□□□□□ -1.71
YDR261W-AYDR261W-A ICT1Q12385 394 aa4.37□□□□□ -1.71
YDR261W-AYDR261W-A SEC3P33332 1336 aaKnown RBP4.36□□□□□ -1.71
YDR261W-AYDR261W-A RNR3P21672 869 aaKnown RBP4.36□□□□□ -1.71
YDR261W-AYDR261W-A CWH43P25618 953 aa4.36□□□□□ -1.71
YDR261W-AYDR261W-A HEM12P32347 362 aaPredicted RBP4.36□□□□□ -1.71
YDR261W-AYDR261W-A EAF5P39995 279 aa4.36□□□□□ -1.71
YDR261W-AYDR261W-A ECM38Q05902 660 aaPredicted RBP4.36□□□□□ -1.71
YDR261W-AYDR261W-A PEX15Q08215 383 aa4.36□□□□□ -1.71
YDR261W-AYDR261W-A HEM1P09950 548 aaPredicted RBP4.35□□□□□ -1.71
YDR261W-AYDR261W-A BET2P20133 325 aa4.35□□□□□ -1.71
YDR261W-AYDR261W-A PTP1P25044 335 aa4.35□□□□□ -1.71
YDR261W-AYDR261W-A DSS4P32601 143 aa4.35□□□□□ -1.71
YDR261W-AYDR261W-A LTP1P40347 161 aa4.35□□□□□ -1.71
YDR261W-AYDR261W-A MNT2P53059 558 aa4.35□□□□□ -1.71
YDR261W-AYDR261W-A COG6P53959 839 aa4.35□□□□□ -1.71
YDR261W-AYDR261W-A MTD1Q02046 320 aaKnown RBP4.35□□□□□ -1.71
YDR261W-AYDR261W-A HOS1Q12214 470 aa4.35□□□□□ -1.71
YDR261W-AYDR261W-A TMT1P32643 299 aa4.34□□□□□ -1.71
YDR261W-AYDR261W-A RPC34P32910 317 aa4.34□□□□□ -1.71
YDR261W-AYDR261W-A TFC4P33339 1025 aa4.34□□□□□ -1.71
YDR261W-AYDR261W-A NET1P47035 1189 aa4.34□□□□□ -1.71
YDR261W-AYDR261W-A PEX14P53112 341 aa4.34□□□□□ -1.71
YDR261W-AYDR261W-A ARG1P22768 420 aa4.33□□□□□ -1.72
YDR261W-AYDR261W-A MRPL9P31334 269 aa4.33□□□□□ -1.72
YDR261W-AYDR261W-A ENP1P38333 483 aaKnown RBP4.33□□□□□ -1.72
YDR261W-AYDR261W-A PAF1P38351 445 aa4.33□□□□□ -1.72
YDR261W-AYDR261W-A STL1P39932 569 aa4.33□□□□□ -1.72
YDR261W-AYDR261W-A BST1P43571 1029 aa4.33□□□□□ -1.72
YDR261W-AYDR261W-A GLO1P50107 326 aa4.33□□□□□ -1.72
YDR261W-AYDR261W-A PHM6Q05637 104 aa4.33□□□□□ -1.72
YDR261W-AYDR261W-A YAP7Q08182 245 aa4.33□□□□□ -1.72
YDR261W-AYDR261W-A PCL8Q08966 492 aa4.33□□□□□ -1.72
YDR261W-AYDR261W-A RTK1Q12100 620 aaPredicted RBP4.33□□□□□ -1.72
YDR261W-AYDR261W-A YMR084WA2P2R3 262 aa4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 80.2 ms