RNA–Protein interactions for RNA: YDR030C

RAD28, Transcript of Protein involved in DNA repair, yeast

Gene RAD28, Length 1,521 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD28	YDR030C	AIM41	Q12032	185 aa		4.89	□□□□□ -1.63
RAD28	YDR030C	SPO21	Q12411	609 aa		4.89	□□□□□ -1.63
RAD28	YDR030C	CSR2	Q12734	1121 aa		4.89	□□□□□ -1.63
RAD28	YDR030C	YOL087C	Q99247	1116 aa		4.89	□□□□□ -1.63
RAD28	YDR030C	FKS1	P38631	1876 aa	Known RBP	4.88	□□□□□ -1.63
RAD28	YDR030C	YLR462W	O13556	202 aa		4.88	□□□□□ -1.63
RAD28	YDR030C	CYC7	P00045	113 aa		4.88	□□□□□ -1.63
RAD28	YDR030C	NFS1	P25374	497 aa		4.88	□□□□□ -1.63
RAD28	YDR030C	KIP1	P28742	1111 aa		4.88	□□□□□ -1.63
RAD28	YDR030C	SEC21	P32074	935 aa	Known RBP	4.88	□□□□□ -1.63
RAD28	YDR030C	STE5	P32917	917 aa		4.88	□□□□□ -1.63
RAD28	YDR030C	WHI3	P34761	661 aa	Known RBP	4.88	□□□□□ -1.63
RAD28	YDR030C	MAC1	P35192	417 aa		4.88	□□□□□ -1.63
RAD28	YDR030C	TRZ1	P36159	838 aa	Predicted RBP	4.88	□□□□□ -1.63
RAD28	YDR030C	HIS2	P38635	335 aa		4.88	□□□□□ -1.63
RAD28	YDR030C	YHL049C	P38722	271 aa		4.88	□□□□□ -1.63
RAD28	YDR030C	SPC72	P39723	622 aa		4.88	□□□□□ -1.63
RAD28	YDR030C	YEL075C	P39972	122 aa		4.88	□□□□□ -1.63
RAD28	YDR030C	LCP5	P40079	357 aa	Predicted RBP	4.88	□□□□□ -1.63
RAD28	YDR030C	YER189W	P40104	122 aa		4.88	□□□□□ -1.63
RAD28	YDR030C	YNL320W	P42840	284 aa		4.88	□□□□□ -1.63
RAD28	YDR030C	YFL064C	P43540	174 aa		4.88	□□□□□ -1.63
RAD28	YDR030C	TRS85	P46944	698 aa		4.88	□□□□□ -1.63
RAD28	YDR030C	YJR039W	P47107	1121 aa		4.88	□□□□□ -1.63
RAD28	YDR030C	YGL039W	P53183	348 aa	Known RBP	4.88	□□□□□ -1.63
RAD28	YDR030C	SQS1	P53866	767 aa	Known RBP	4.88	□□□□□ -1.63
RAD28	YDR030C	YOR131C	Q12486	218 aa		4.88	□□□□□ -1.63
RAD28	YDR030C	YBL111C	Q3E7Y5	667 aa		4.88	□□□□□ -1.63
RAD28	YDR030C	GLT1	Q12680	2145 aa	Known RBP	4.88	□□□□□ -1.63
RAD28	YDR030C	ARG4	P04076	463 aa	Predicted RBP	4.87	□□□□□ -1.63
RAD28	YDR030C	CDC33	P07260	213 aa	Known RBP	4.87	□□□□□ -1.63
RAD28	YDR030C	FBP1	P09201	348 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	PRP9	P19736	530 aa	Known RBP	4.87	□□□□□ -1.63
RAD28	YDR030C	PER1	P25625	357 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	CDC48	P25694	835 aa	Known RBP	4.87	□□□□□ -1.63
RAD28	YDR030C	MUD1	P32605	298 aa	Known RBP	4.87	□□□□□ -1.63
RAD28	YDR030C	MRP8	P35719	219 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	MCR1	P36060	302 aa	Known RBP	4.87	□□□□□ -1.63
RAD28	YDR030C	VBA5	P36172	582 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	ALG3	P38179	458 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	YBR184W	P38299	523 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	RRT2	P38332	387 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	ERC1	P38767	581 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	SAK1	P38990	1142 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	CCT2	P39076	527 aa	Known RBP	4.87	□□□□□ -1.63
RAD28	YDR030C	KAP123	P40069	1113 aa	Known RBP	4.87	□□□□□ -1.63
RAD28	YDR030C	TIM54	P47045	478 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	BRO1	P48582	844 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	CTR1	P49573	406 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	RIM8	P53179	542 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	TAM41	P53230	385 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	RNH70	P53331	553 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	TDA9	Q04545	1251 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	DUS3	Q06053	668 aa	Known RBP	4.87	□□□□□ -1.63
RAD28	YDR030C	UBX5	Q06682	500 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	SLX4	Q12098	748 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	CIT2	P08679	460 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
RAD28	YDR030C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
RAD28	YDR030C	SHP1	P34223	423 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	OCT1	P35999	772 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	YKR018C	P36114	725 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	MCM7	P38132	845 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
RAD28	YDR030C	HSE1	P38753	452 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	IRR1	P40541	1150 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	MPH1	P40562	993 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	NMD5	P46970	1048 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	UTP6	Q02354	440 aa	Known RBP	4.87	□□□□□ -1.63
RAD28	YDR030C	ISA1	Q07821	250 aa	Predicted RBP	4.87	□□□□□ -1.63
RAD28	YDR030C	SMC5	Q08204	1093 aa		4.87	□□□□□ -1.63
RAD28	YDR030C	PYC1	P11154	1178 aa	Known RBP	4.86	□□□□□ -1.63
RAD28	YDR030C	DBF4	P32325	704 aa		4.86	□□□□□ -1.63
RAD28	YDR030C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
RAD28	YDR030C	UTR4	P32626	227 aa		4.86	□□□□□ -1.63
RAD28	YDR030C	COT1	P32798	439 aa		4.86	□□□□□ -1.63
RAD28	YDR030C	TFC4	P33339	1025 aa		4.86	□□□□□ -1.63
RAD28	YDR030C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
RAD28	YDR030C	YKL107W	P34251	309 aa		4.86	□□□□□ -1.63
RAD28	YDR030C	OAF3	P36023	863 aa		4.86	□□□□□ -1.63
RAD28	YDR030C	TIF5	P38431	405 aa	Known RBP	4.86	□□□□□ -1.63
RAD28	YDR030C	MMS21	P38632	267 aa		4.86	□□□□□ -1.63
RAD28	YDR030C	ECM1	P39715	212 aa		4.86	□□□□□ -1.63
RAD28	YDR030C	VAB2	P40003	282 aa		4.86	□□□□□ -1.63
RAD28	YDR030C	HMF1	P40037	129 aa	Known RBP	4.86	□□□□□ -1.63
RAD28	YDR030C	YTA12	P40341	825 aa		4.86	□□□□□ -1.63
RAD28	YDR030C	SAP185	P40856	1058 aa		4.86	□□□□□ -1.63
RAD28	YDR030C	YGL176C	P46945	554 aa		4.86	□□□□□ -1.63
RAD28	YDR030C	VPS53	P47061	822 aa		4.86	□□□□□ -1.63
RAD28	YDR030C	AVT1	P47082	602 aa		4.86	□□□□□ -1.63
RAD28	YDR030C	HNT2	P49775	206 aa		4.86	□□□□□ -1.63
RAD28	YDR030C	YGR111W	P53265	400 aa		4.86	□□□□□ -1.63
RAD28	YDR030C	MTG1	Q03151	367 aa	Predicted RBP	4.86	□□□□□ -1.63
RAD28	YDR030C	EAR1	Q03212	550 aa		4.86	□□□□□ -1.63
RAD28	YDR030C	ATG16	Q03818	150 aa		4.86	□□□□□ -1.63
RAD28	YDR030C	SDH5	Q08230	162 aa		4.86	□□□□□ -1.63
RAD28	YDR030C	YPL225W	Q08971	146 aa	Known RBP	4.86	□□□□□ -1.63
RAD28	YDR030C	YPL066W	Q12194	479 aa		4.86	□□□□□ -1.63
RAD28	YDR030C	HIF1	Q12373	385 aa		4.86	□□□□□ -1.63
RAD28	YDR030C	NSI1	Q12457	570 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 31.8 ms