RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W BUD17P53727 317 aa5.18□□□□□ -1.58
SHR3YDL212W CPR8P53728 308 aa5.18□□□□□ -1.58
SHR3YDL212W MRI1Q06489 411 aaKnown RBP5.18□□□□□ -1.58
SHR3YDL212W YOR378WQ08902 515 aa5.18□□□□□ -1.58
SHR3YDL212W CWC2Q12046 339 aaPredicted RBP5.18□□□□□ -1.58
SHR3YDL212W YEL025CP39991 1188 aa5.17□□□□□ -1.58
SHR3YDL212W MTD1Q02046 320 aaKnown RBP5.17□□□□□ -1.58
SHR3YDL212W FMP30Q02883 468 aa5.17□□□□□ -1.58
SHR3YDL212W CEF1Q03654 590 aaPredicted RBP5.17□□□□□ -1.58
SHR3YDL212W ADE5,7P07244 802 aaKnown RBP5.16□□□□□ -1.58
SHR3YDL212W MDM10P18409 493 aa5.16□□□□□ -1.58
SHR3YDL212W THI6P41835 540 aa5.16□□□□□ -1.58
SHR3YDL212W SPC105P53148 917 aa5.16□□□□□ -1.58
SHR3YDL212W SQS1P53866 767 aaKnown RBP5.16□□□□□ -1.58
SHR3YDL212W YNL018CP53976 612 aa5.16□□□□□ -1.58
SHR3YDL212W RTK1Q12100 620 aaPredicted RBP5.16□□□□□ -1.58
SHR3YDL212W HOM2P13663 365 aaKnown RBP5.15□□□□□ -1.59
SHR3YDL212W VPS33P20795 691 aa5.15□□□□□ -1.59
SHR3YDL212W AAD3P25612 363 aa5.15□□□□□ -1.59
SHR3YDL212W TFC4P33339 1025 aa5.15□□□□□ -1.59
SHR3YDL212W DHR2P36009 735 aaPredicted RBP5.15□□□□□ -1.59
SHR3YDL212W PAF1P38351 445 aa5.15□□□□□ -1.59
SHR3YDL212W MNT2P53059 558 aa5.15□□□□□ -1.59
SHR3YDL212W CPA2P03965 1118 aaKnown RBP5.14□□□□□ -1.59
SHR3YDL212W PLC1P32383 869 aa5.14□□□□□ -1.59
SHR3YDL212W YJL193WP39542 402 aa5.14□□□□□ -1.59
SHR3YDL212W TAX4P47030 604 aa5.14□□□□□ -1.59
SHR3YDL212W PIP2P52960 996 aa5.14□□□□□ -1.59
SHR3YDL212W USA1Q03714 838 aa5.14□□□□□ -1.59
SHR3YDL212W YPL216WQ08964 1102 aa5.14□□□□□ -1.59
SHR3YDL212W ZPS1Q12512 249 aa5.14□□□□□ -1.59
SHR3YDL212W PMA2P19657 947 aa5.13□□□□□ -1.59
SHR3YDL212W ARG1P22768 420 aa5.13□□□□□ -1.59
SHR3YDL212W YPT10P38146 199 aa5.13□□□□□ -1.59
SHR3YDL212W RIM4P38741 713 aa5.13□□□□□ -1.59
SHR3YDL212W PIH1P38768 344 aa5.13□□□□□ -1.59
SHR3YDL212W COQ6P53318 479 aa5.13□□□□□ -1.59
SHR3YDL212W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
SHR3YDL212W VPS5Q92331 675 aa5.13□□□□□ -1.59
SHR3YDL212W RPL7AP05737 244 aaKnown RBP5.12□□□□□ -1.59
SHR3YDL212W ERG11P10614 530 aa5.12□□□□□ -1.59
SHR3YDL212W PCK1P10963 549 aa5.12□□□□□ -1.59
SHR3YDL212W CAP1P28495 268 aaKnown RBP5.12□□□□□ -1.59
SHR3YDL212W MAD2P40958 196 aa5.12□□□□□ -1.59
SHR3YDL212W SAP4P53036 818 aa5.12□□□□□ -1.59
SHR3YDL212W SLD3P53135 668 aa5.12□□□□□ -1.59
SHR3YDL212W PEX15Q08215 383 aa5.12□□□□□ -1.59
SHR3YDL212W SLK19Q08581 821 aaKnown RBP5.12□□□□□ -1.59
SHR3YDL212W RPL7BQ12213 244 aaKnown RBP5.12□□□□□ -1.59
SHR3YDL212W URA3P03962 267 aa5.11□□□□□ -1.59
SHR3YDL212W CWH43P25618 953 aa5.11□□□□□ -1.59
SHR3YDL212W PEX14P53112 341 aa5.11□□□□□ -1.59
SHR3YDL212W FOL1P53848 824 aa5.11□□□□□ -1.59
SHR3YDL212W YDL073WQ07454 984 aa5.11□□□□□ -1.59
SHR3YDL212W DIN7Q12086 430 aa5.11□□□□□ -1.59
SHR3YDL212W TUF1P02992 437 aaKnown RBP5.1□□□□□ -1.59
SHR3YDL212W RNR3P21672 869 aaKnown RBP5.1□□□□□ -1.59
SHR3YDL212W DSS4P32601 143 aa5.1□□□□□ -1.59
SHR3YDL212W ORC2P32833 620 aa5.1□□□□□ -1.59
SHR3YDL212W SEC3P33332 1336 aaKnown RBP5.1□□□□□ -1.59
SHR3YDL212W CCL1P37366 393 aa5.1□□□□□ -1.59
SHR3YDL212W STL1P39932 569 aa5.1□□□□□ -1.59
SHR3YDL212W RIM13Q03792 727 aa5.1□□□□□ -1.59
SHR3YDL212W HOF1Q05080 669 aa5.1□□□□□ -1.59
SHR3YDL212W PHM6Q05637 104 aa5.1□□□□□ -1.59
SHR3YDL212W PCL8Q08966 492 aa5.1□□□□□ -1.59
SHR3YDL212W AI5_ALPHAQ9ZZX1 630 aa5.1□□□□□ -1.59
SHR3YDL212W SSB1P11484 613 aaKnown RBP5.09□□□□□ -1.59
SHR3YDL212W KAR1P11927 433 aa5.09□□□□□ -1.59
SHR3YDL212W WHI2P12611 486 aa5.09□□□□□ -1.59
SHR3YDL212W MBR1P23493 339 aa5.09□□□□□ -1.59
SHR3YDL212W HOT13P36078 116 aa5.09□□□□□ -1.59
SHR3YDL212W EMP65P40085 556 aa5.09□□□□□ -1.59
SHR3YDL212W SSB2P40150 613 aaKnown RBP5.09□□□□□ -1.59
SHR3YDL212W YFL015CP43578 164 aa5.09□□□□□ -1.59
SHR3YDL212W MDR1P53258 950 aa5.09□□□□□ -1.59
SHR3YDL212W YNR071CP53757 342 aa5.09□□□□□ -1.59
SHR3YDL212W SLX4Q12098 748 aa5.09□□□□□ -1.59
SHR3YDL212W AQY1P0CD91 305 aa5.08□□□□□ -1.6
SHR3YDL212W NUP1P20676 1076 aa5.07□□□□□ -1.6
SHR3YDL212W MRC1P25588 1096 aa5.07□□□□□ -1.6
SHR3YDL212W LOT5P34234 306 aa5.07□□□□□ -1.6
SHR3YDL212W YIL092WP40497 633 aa5.07□□□□□ -1.6
SHR3YDL212W HOL1P53389 586 aa5.07□□□□□ -1.6
SHR3YDL212W YNL092WP53934 400 aa5.07□□□□□ -1.6
SHR3YDL212W TGS1Q12052 315 aa5.07□□□□□ -1.6
SHR3YDL212W PET309P32522 965 aaPredicted RBP5.06□□□□□ -1.6
SHR3YDL212W STB5P38699 743 aa5.06□□□□□ -1.6
SHR3YDL212W SEG1Q04279 960 aa5.06□□□□□ -1.6
SHR3YDL212W PGK1P00560 416 aaKnown RBP5.05□□□□□ -1.6
SHR3YDL212W HEM1P09950 548 aaPredicted RBP5.05□□□□□ -1.6
SHR3YDL212W COS12P53053 380 aa5.05□□□□□ -1.6
SHR3YDL212W YNL034WP53963 612 aa5.05□□□□□ -1.6
SHR3YDL212W FRE7Q12333 620 aa5.05□□□□□ -1.6
SHR3YDL212W DBP10Q12389 995 aaKnown RBP5.05□□□□□ -1.6
SHR3YDL212W SEC12P11655 471 aa5.04□□□□□ -1.6
SHR3YDL212W YPK1P12688 680 aaKnown RBP5.04□□□□□ -1.6
SHR3YDL212W APN1P22936 367 aa5.04□□□□□ -1.6
SHR3YDL212W CDC5P32562 705 aa5.04□□□□□ -1.6
SHR3YDL212W EXO1P39875 702 aa5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 117.6 ms