RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C MRPL13Q02204 264 aa3.9□□□□□ -1.79
RRP42YDL111C NRG1Q03125 231 aa3.9□□□□□ -1.79
RRP42YDL111C GAD1Q04792 585 aa3.9□□□□□ -1.79
RRP42YDL111C ENT2Q05785 613 aa3.9□□□□□ -1.79
RRP42YDL111C VPS36Q06696 566 aa3.9□□□□□ -1.79
RRP42YDL111C CLF1Q12309 687 aaPredicted RBP3.9□□□□□ -1.79
RRP42YDL111C RNR1P21524 888 aaKnown RBP3.89□□□□□ -1.79
RRP42YDL111C SIR1P21691 654 aa3.89□□□□□ -1.79
RRP42YDL111C MCM3P24279 971 aaKnown RBP3.89□□□□□ -1.79
RRP42YDL111C PRE4P30657 266 aa3.89□□□□□ -1.79
RRP42YDL111C IMP2'P32351 346 aa3.89□□□□□ -1.79
RRP42YDL111C NPR3P38742 1146 aa3.89□□□□□ -1.79
RRP42YDL111C TMA108P40462 946 aa3.89□□□□□ -1.79
RRP42YDL111C PRM2P40534 656 aa3.89□□□□□ -1.79
RRP42YDL111C NOP9P47077 666 aaKnown RBP3.89□□□□□ -1.79
RRP42YDL111C AMA1P50082 593 aa3.89□□□□□ -1.79
RRP42YDL111C COX18P53239 316 aa3.89□□□□□ -1.79
RRP42YDL111C ARC35P53731 342 aaKnown RBP3.89□□□□□ -1.79
RRP42YDL111C IWR1Q07532 353 aaPredicted RBP3.89□□□□□ -1.79
RRP42YDL111C CRD1Q07560 283 aa3.89□□□□□ -1.79
RRP42YDL111C DIA2Q08496 732 aaPredicted RBP3.89□□□□□ -1.79
RRP42YDL111C MRH1Q12117 320 aaPredicted RBP3.89□□□□□ -1.79
RRP42YDL111C HOS1Q12214 470 aa3.89□□□□□ -1.79
RRP42YDL111C DBP10Q12389 995 aaKnown RBP3.89□□□□□ -1.79
RRP42YDL111C POM34Q12445 299 aa3.89□□□□□ -1.79
RRP42YDL111C YOL087CQ99247 1116 aa3.89□□□□□ -1.79
RRP42YDL111C HMG2P12684 1045 aa3.88□□□□□ -1.79
RRP42YDL111C UBC1P21734 215 aaKnown RBP3.88□□□□□ -1.79
RRP42YDL111C MTC7P32633 139 aa3.88□□□□□ -1.79
RRP42YDL111C MRPL36P36531 177 aa3.88□□□□□ -1.79
RRP42YDL111C PUG1P40100 303 aa3.88□□□□□ -1.79
RRP42YDL111C TAH11P47112 604 aa3.88□□□□□ -1.79
RRP42YDL111C TEX1P53851 422 aaKnown RBP3.88□□□□□ -1.79
RRP42YDL111C MDM1Q01846 1127 aa3.88□□□□□ -1.79
RRP42YDL111C CTK1Q03957 528 aaKnown RBP3.88□□□□□ -1.79
RRP42YDL111C AAD4Q07747 329 aa3.88□□□□□ -1.79
RRP42YDL111C RPS9BP05755 195 aaKnown RBP3.87□□□□□ -1.79
RRP42YDL111C NUC1P08466 329 aa3.87□□□□□ -1.79
RRP42YDL111C POL3P15436 1097 aa3.87□□□□□ -1.79
RRP42YDL111C SEC15P22224 910 aa3.87□□□□□ -1.79
RRP42YDL111C PEX1P24004 1043 aa3.87□□□□□ -1.79
RRP42YDL111C RPT3P33298 428 aaKnown RBP3.87□□□□□ -1.79
RRP42YDL111C JNM1P36224 373 aa3.87□□□□□ -1.79
RRP42YDL111C YNL195CP40168 261 aa3.87□□□□□ -1.79
RRP42YDL111C YJL163CP46996 555 aa3.87□□□□□ -1.79
RRP42YDL111C MDR1P53258 950 aa3.87□□□□□ -1.79
RRP42YDL111C MEP3P53390 489 aa3.87□□□□□ -1.79
RRP42YDL111C AIM41Q12032 185 aa3.87□□□□□ -1.79
RRP42YDL111C TGL5Q12043 749 aa3.87□□□□□ -1.79
RRP42YDL111C SUT2Q12286 268 aa3.87□□□□□ -1.79
RRP42YDL111C HRP1Q99383 534 aaKnown RBP3.87□□□□□ -1.79
RRP42YDL111C URA3P03962 267 aa3.86□□□□□ -1.79
RRP42YDL111C LEU2P04173 364 aaPredicted RBP3.86□□□□□ -1.79
RRP42YDL111C LAT1P12695 482 aaKnown RBP3.86□□□□□ -1.79
RRP42YDL111C NCP1P16603 691 aaKnown RBP3.86□□□□□ -1.79
RRP42YDL111C CLB4P24871 460 aa3.86□□□□□ -1.79
RRP42YDL111C FRD1P32614 470 aaKnown RBP3.86□□□□□ -1.79
RRP42YDL111C SLC1P33333 303 aa3.86□□□□□ -1.79
RRP42YDL111C RMA1P36001 430 aaKnown RBP3.86□□□□□ -1.79
RRP42YDL111C BAP3P41815 604 aa3.86□□□□□ -1.79
RRP42YDL111C SRB7P47822 140 aa3.86□□□□□ -1.79
RRP42YDL111C CTF18P49956 741 aa3.86□□□□□ -1.79
RRP42YDL111C IMA1P53051 589 aa3.86□□□□□ -1.79
RRP42YDL111C ARA2Q04212 335 aa3.86□□□□□ -1.79
RRP42YDL111C THI22Q06490 572 aa3.86□□□□□ -1.79
RRP42YDL111C TSR2Q06672 205 aaKnown RBP3.86□□□□□ -1.79
RRP42YDL111C YCG1Q06680 1035 aa3.86□□□□□ -1.79
RRP42YDL111C YDR056CQ12025 205 aa3.86□□□□□ -1.79
RRP42YDL111C ECM3Q99252 613 aa3.86□□□□□ -1.79
RRP42YDL111C INH1P01097 85 aa3.85□□□□□ -1.79
RRP42YDL111C BIK1P11709 440 aa3.85□□□□□ -1.79
RRP42YDL111C ARG1P22768 420 aa3.85□□□□□ -1.79
RRP42YDL111C ERG6P25087 383 aaKnown RBP3.85□□□□□ -1.79
RRP42YDL111C PRP45P28004 379 aaPredicted RBP3.85□□□□□ -1.79
RRP42YDL111C MPE1P35728 441 aaKnown RBP3.85□□□□□ -1.79
RRP42YDL111C CDS1P38221 457 aa3.85□□□□□ -1.79
RRP42YDL111C GET2P40056 285 aa3.85□□□□□ -1.79
RRP42YDL111C PSF2P40359 213 aa3.85□□□□□ -1.79
RRP42YDL111C YIR042CP40586 236 aa3.85□□□□□ -1.79
RRP42YDL111C GSM1P42950 618 aa3.85□□□□□ -1.79
RRP42YDL111C BNA1P47096 177 aa3.85□□□□□ -1.79
RRP42YDL111C SAP4P53036 818 aa3.85□□□□□ -1.79
RRP42YDL111C RIA1P53893 1110 aa3.85□□□□□ -1.79
RRP42YDL111C FDC1Q03034 503 aa3.85□□□□□ -1.79
RRP42YDL111C GIR2Q03768 265 aaPredicted RBP3.85□□□□□ -1.79
RRP42YDL111C VID22Q05934 901 aa3.85□□□□□ -1.79
RRP42YDL111C TFC6Q06339 672 aa3.85□□□□□ -1.79
RRP42YDL111C CSR1Q06705 408 aaKnown RBP3.85□□□□□ -1.79
RRP42YDL111C MED1Q12321 566 aa3.85□□□□□ -1.79
RRP42YDL111C SNF1P06782 633 aaKnown RBP3.84□□□□□ -1.79
RRP42YDL111C PCK1P10963 549 aa3.84□□□□□ -1.79
RRP42YDL111C FSH1P38777 243 aaKnown RBP3.84□□□□□ -1.79
RRP42YDL111C PCL5P38794 229 aa3.84□□□□□ -1.79
RRP42YDL111C CRG1P38892 291 aaRIP-Chip data3.84□□□□□ -1.79not detected
RRP42YDL111C LYS9P38999 446 aa3.84□□□□□ -1.79
RRP42YDL111C UME6P39001 836 aa3.84□□□□□ -1.79
RRP42YDL111C NUP60P39705 539 aa3.84□□□□□ -1.79
RRP42YDL111C NOP16P40007 231 aaKnown RBP3.84□□□□□ -1.79
RRP42YDL111C FTR1P40088 404 aa3.84□□□□□ -1.79
RRP42YDL111C YDL183CP48569 320 aa3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms