RNA–Protein interactions for RNA: YBR279W

PAF1, Transcript of Component of the Paf1p complex involved in transcription elongation, yeast

Gene PAF1, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAF1	YBR279W	YPL216W	Q08964	1102 aa		5.78	□□□□□ -1.48
PAF1	YBR279W	YEF3	P16521	1044 aa	Known RBP	5.77	□□□□□ -1.49
PAF1	YBR279W	PIH1	P38768	344 aa		5.77	□□□□□ -1.49
PAF1	YBR279W	LRO1	P40345	661 aa		5.77	□□□□□ -1.49
PAF1	YBR279W	PMT6	P42934	759 aa		5.77	□□□□□ -1.49
PAF1	YBR279W	MET14	Q02196	202 aa		5.77	□□□□□ -1.49
PAF1	YBR279W	MFM1	Q02783	413 aa		5.77	□□□□□ -1.49
PAF1	YBR279W	EFR3	Q03653	782 aa	Known RBP	5.77	□□□□□ -1.49
PAF1	YBR279W	LAM4	P38800	1345 aa		5.77	□□□□□ -1.49
PAF1	YBR279W	VAS1	P07806	1104 aa	Known RBP	5.76	□□□□□ -1.49
PAF1	YBR279W	PTP2	P29461	750 aa		5.76	□□□□□ -1.49
PAF1	YBR279W	EHT1	P38295	451 aa		5.76	□□□□□ -1.49
PAF1	YBR279W	YIL166C	P40445	542 aa		5.76	□□□□□ -1.49
PAF1	YBR279W	CCT7	P42943	550 aa	Known RBP	5.76	□□□□□ -1.49
PAF1	YBR279W	YDL183C	P48569	320 aa		5.76	□□□□□ -1.49
PAF1	YBR279W	VPS73	P53142	486 aa	Known RBP	5.76	□□□□□ -1.49
PAF1	YBR279W	PAP2	P53632	584 aa	Known RBP	5.76	□□□□□ -1.49
PAF1	YBR279W	TGS1	Q12052	315 aa		5.76	□□□□□ -1.49
PAF1	YBR279W	MDM20	Q12387	796 aa	Known RBP	5.76	□□□□□ -1.49
PAF1	YBR279W	LOT5	P34234	306 aa		5.75	□□□□□ -1.49
PAF1	YBR279W	SCS2	P40075	244 aa	Known RBP	5.75	□□□□□ -1.49
PAF1	YBR279W	QRI1	P43123	477 aa	Known RBP	5.75	□□□□□ -1.49
PAF1	YBR279W	PUS4	P48567	403 aa	Known RBP	5.75	□□□□□ -1.49
PAF1	YBR279W	ARR3	Q06598	404 aa		5.75	□□□□□ -1.49
PAF1	YBR279W	PCK1	P10963	549 aa		5.74	□□□□□ -1.49
PAF1	YBR279W	MRPL7	P36519	292 aa		5.74	□□□□□ -1.49
PAF1	YBR279W	UBS1	P38290	277 aa		5.74	□□□□□ -1.49
PAF1	YBR279W	TDP1	P38319	544 aa		5.74	□□□□□ -1.49
PAF1	YBR279W	YLF2	P38746	405 aa		5.74	□□□□□ -1.49
PAF1	YBR279W	MAD2	P40958	196 aa		5.74	□□□□□ -1.49
PAF1	YBR279W	PIP2	P52960	996 aa		5.74	□□□□□ -1.49
PAF1	YBR279W	YNR071C	P53757	342 aa		5.74	□□□□□ -1.49
PAF1	YBR279W	YDL073W	Q07454	984 aa		5.74	□□□□□ -1.49
PAF1	YBR279W	RTK1	Q12100	620 aa	Predicted RBP	5.74	□□□□□ -1.49
PAF1	YBR279W	ARP7	Q12406	477 aa		5.74	□□□□□ -1.49
PAF1	YBR279W	URA3	P03962	267 aa		5.74	□□□□□ -1.49
PAF1	YBR279W	GAL1	P04385	528 aa		5.74	□□□□□ -1.49
PAF1	YBR279W	BET2	P20133	325 aa		5.74	□□□□□ -1.49
PAF1	YBR279W	CBP3	P21560	335 aa		5.74	□□□□□ -1.49
PAF1	YBR279W	ARG1	P22768	420 aa		5.74	□□□□□ -1.49
PAF1	YBR279W	SPO11	P23179	398 aa		5.74	□□□□□ -1.49
PAF1	YBR279W	DSS4	P32601	143 aa		5.74	□□□□□ -1.49
PAF1	YBR279W	MUP3	P38734	546 aa		5.74	□□□□□ -1.49
PAF1	YBR279W	SNF12	P53628	566 aa		5.74	□□□□□ -1.49
PAF1	YBR279W	APM1	Q00776	475 aa	Predicted RBP	5.74	□□□□□ -1.49
PAF1	YBR279W	YDR179W-A	Q03983	463 aa		5.74	□□□□□ -1.49
PAF1	YBR279W	RRP6	Q12149	733 aa	Known RBP	5.74	□□□□□ -1.49
PAF1	YBR279W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
PAF1	YBR279W	DBP10	Q12389	995 aa	Known RBP	5.74	□□□□□ -1.49
PAF1	YBR279W	VPS27	P40343	622 aa	Known RBP	5.73	□□□□□ -1.49
PAF1	YBR279W	YIP4	P53093	235 aa		5.73	□□□□□ -1.49
PAF1	YBR279W	TRS23	Q03784	219 aa		5.73	□□□□□ -1.49
PAF1	YBR279W	DIN7	Q12086	430 aa		5.73	□□□□□ -1.49
PAF1	YBR279W	YOL114C	Q12322	202 aa		5.73	□□□□□ -1.49
PAF1	YBR279W	CTT1	P06115	562 aa		5.72	□□□□□ -1.49
PAF1	YBR279W	TPM2	P40414	161 aa		5.72	□□□□□ -1.49
PAF1	YBR279W	HIS6	P40545	261 aa		5.72	□□□□□ -1.49
PAF1	YBR279W	GSM1	P42950	618 aa		5.72	□□□□□ -1.49
PAF1	YBR279W	GFD1	Q04839	188 aa	Known RBP	5.72	□□□□□ -1.49
PAF1	YBR279W	CRD1	Q07560	283 aa		5.72	□□□□□ -1.49
PAF1	YBR279W	VPS34	P22543	875 aa		5.71	□□□□□ -1.5
PAF1	YBR279W	CNE1	P27825	502 aa		5.71	□□□□□ -1.5
PAF1	YBR279W	CCL1	P37366	393 aa		5.71	□□□□□ -1.5
PAF1	YBR279W	YMC2	P38087	329 aa		5.71	□□□□□ -1.5
PAF1	YBR279W	SWD1	P39706	426 aa		5.71	□□□□□ -1.5
PAF1	YBR279W	YEL020C	P39994	560 aa		5.71	□□□□□ -1.5
PAF1	YBR279W	RTS3	P53289	263 aa		5.71	□□□□□ -1.5
PAF1	YBR279W	BUD17	P53727	317 aa		5.71	□□□□□ -1.5
PAF1	YBR279W	TEP1	P53916	434 aa		5.71	□□□□□ -1.5
PAF1	YBR279W	ADH4	P10127	382 aa		5.7	□□□□□ -1.5
PAF1	YBR279W	PHO81	P17442	1178 aa		5.7	□□□□□ -1.5
PAF1	YBR279W	STE4	P18851	423 aa		5.7	□□□□□ -1.5
PAF1	YBR279W	RPA135	P22138	1203 aa	Known RBP	5.7	□□□□□ -1.5
PAF1	YBR279W	ILV6	P25605	309 aa	Known RBP	5.7	□□□□□ -1.5
PAF1	YBR279W	VFA1	P40080	203 aa		5.7	□□□□□ -1.5
PAF1	YBR279W	ZPS1	Q12512	249 aa		5.7	□□□□□ -1.5
PAF1	YBR279W	TPK2	P06245	380 aa		5.69	□□□□□ -1.5
PAF1	YBR279W	MSH1	P25846	959 aa		5.69	□□□□□ -1.5
PAF1	YBR279W	FAF1	P40546	346 aa	Predicted RBP	5.69	□□□□□ -1.5
PAF1	YBR279W	IDS2	P46958	469 aa		5.69	□□□□□ -1.5
PAF1	YBR279W	MRK1	P50873	501 aa		5.69	□□□□□ -1.5
PAF1	YBR279W	CEG1	Q01159	459 aa	Predicted RBP	5.69	□□□□□ -1.5
PAF1	YBR279W	PHO5	P00635	467 aa		5.68	□□□□□ -1.5
PAF1	YBR279W	STE12	P13574	688 aa		5.68	□□□□□ -1.5
PAF1	YBR279W	PMC1	P38929	1173 aa	Predicted RBP	5.68	□□□□□ -1.5
PAF1	YBR279W	QRI7	P43122	407 aa		5.68	□□□□□ -1.5
PAF1	YBR279W	CPR8	P53728	308 aa		5.68	□□□□□ -1.5
PAF1	YBR279W	USA1	Q03714	838 aa		5.68	□□□□□ -1.5
PAF1	YBR279W	VMS1	Q04311	632 aa	Known RBP	5.68	□□□□□ -1.5
PAF1	YBR279W	HOF1	Q05080	669 aa		5.68	□□□□□ -1.5
PAF1	YBR279W	SLK19	Q08581	821 aa	Known RBP	5.68	□□□□□ -1.5
PAF1	YBR279W	WHI2	P12611	486 aa		5.67	□□□□□ -1.5
PAF1	YBR279W	SAT4	P25333	603 aa	Known RBP	5.67	□□□□□ -1.5
PAF1	YBR279W	UGP1	P32861	499 aa	Known RBP	5.67	□□□□□ -1.5
PAF1	YBR279W	RRP8	P38961	392 aa	Known RBP	5.67	□□□□□ -1.5
PAF1	YBR279W	COQ6	P53318	479 aa		5.67	□□□□□ -1.5
PAF1	YBR279W	UBX4	P54730	416 aa		5.67	□□□□□ -1.5
PAF1	YBR279W	VPS64	Q03944	604 aa		5.67	□□□□□ -1.5
PAF1	YBR279W	AAD4	Q07747	329 aa		5.67	□□□□□ -1.5
PAF1	YBR279W	PRP45	P28004	379 aa	Predicted RBP	5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 72.4 ms