RNA–Protein interactions for RNA: YBR130C

SHE3, Transcript of Protein adaptor between Myo4p and the She2p-mRNA complex, yeast

Gene SHE3, Length 1,278 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE3	YBR130C	VFA1	P40080	203 aa		4.87	□□□□□ -1.63
SHE3	YBR130C	CAB2	P40506	365 aa		4.87	□□□□□ -1.63
SHE3	YBR130C	MDM1	Q01846	1127 aa		4.87	□□□□□ -1.63
SHE3	YBR130C	SLU7	Q02775	382 aa	Known RBP	4.87	□□□□□ -1.63
SHE3	YBR130C	ATG21	Q02887	496 aa		4.87	□□□□□ -1.63
SHE3	YBR130C	THI22	Q06490	572 aa		4.87	□□□□□ -1.63
SHE3	YBR130C	CSR1	Q06705	408 aa	Known RBP	4.87	□□□□□ -1.63
SHE3	YBR130C	TRP4	P07285	380 aa	Predicted RBP	4.86	□□□□□ -1.63
SHE3	YBR130C	ARG1	P22768	420 aa		4.86	□□□□□ -1.63
SHE3	YBR130C	PRP28	P23394	588 aa		4.86	□□□□□ -1.63
SHE3	YBR130C	COS111	P38308	924 aa		4.86	□□□□□ -1.63
SHE3	YBR130C	REV7	P38927	245 aa		4.86	□□□□□ -1.63
SHE3	YBR130C	GET2	P40056	285 aa		4.86	□□□□□ -1.63
SHE3	YBR130C	BAP3	P41815	604 aa		4.86	□□□□□ -1.63
SHE3	YBR130C	GSM1	P42950	618 aa		4.86	□□□□□ -1.63
SHE3	YBR130C	SRB7	P47822	140 aa		4.86	□□□□□ -1.63
SHE3	YBR130C	TEL2	P53038	688 aa		4.86	□□□□□ -1.63
SHE3	YBR130C	MTL1	P53214	551 aa		4.86	□□□□□ -1.63
SHE3	YBR130C	ARC35	P53731	342 aa	Known RBP	4.86	□□□□□ -1.63
SHE3	YBR130C	VPS64	Q03944	604 aa		4.86	□□□□□ -1.63
SHE3	YBR130C	YOL087C	Q99247	1116 aa		4.86	□□□□□ -1.63
SHE3	YBR130C	ERG6	P25087	383 aa	Known RBP	4.85	□□□□□ -1.63
SHE3	YBR130C	IMP2'	P32351	346 aa		4.85	□□□□□ -1.63
SHE3	YBR130C	MVD1	P32377	396 aa	Known RBP	4.85	□□□□□ -1.63
SHE3	YBR130C	DCG1	P32460	244 aa		4.85	□□□□□ -1.63
SHE3	YBR130C	MTC7	P32633	139 aa		4.85	□□□□□ -1.63
SHE3	YBR130C	TEF4	P36008	412 aa	Known RBP	4.85	□□□□□ -1.63
SHE3	YBR130C	FSH1	P38777	243 aa	Known RBP	4.85	□□□□□ -1.63
SHE3	YBR130C	YEL025C	P39991	1188 aa		4.85	□□□□□ -1.63
SHE3	YBR130C	FTR1	P40088	404 aa		4.85	□□□□□ -1.63
SHE3	YBR130C	ELO3	P40319	345 aa		4.85	□□□□□ -1.63
SHE3	YBR130C	YIL077C	P40508	320 aa		4.85	□□□□□ -1.63
SHE3	YBR130C	MEP3	P53390	489 aa		4.85	□□□□□ -1.63
SHE3	YBR130C	YDR056C	Q12025	205 aa		4.85	□□□□□ -1.63
SHE3	YBR130C	ENT1	Q12518	454 aa		4.85	□□□□□ -1.63
SHE3	YBR130C	RIT1	P23796	513 aa		4.84	□□□□□ -1.63
SHE3	YBR130C	FEN2	P25621	512 aa	Known RBP	4.84	□□□□□ -1.63
SHE3	YBR130C	CTS1	P29029	562 aa		4.84	□□□□□ -1.63
SHE3	YBR130C	CRG1	P38892	291 aa	RIP-Chip data	4.84	□□□□□ -1.63	not detected
SHE3	YBR130C	MUP1	P50276	574 aa		4.84	□□□□□ -1.63
SHE3	YBR130C	IMA1	P53051	589 aa		4.84	□□□□□ -1.63
SHE3	YBR130C	MRPS35	P53292	345 aa		4.84	□□□□□ -1.63
SHE3	YBR130C	VID22	Q05934	901 aa		4.84	□□□□□ -1.63
SHE3	YBR130C	YFT2	Q06676	274 aa		4.84	□□□□□ -1.63
SHE3	YBR130C	ZRT2	Q12436	422 aa		4.84	□□□□□ -1.63
SHE3	YBR130C	NCP1	P16603	691 aa	Known RBP	4.83	□□□□□ -1.64
SHE3	YBR130C	VPS33	P20795	691 aa		4.83	□□□□□ -1.64
SHE3	YBR130C	GCD7	P32502	381 aa	Predicted RBP	4.83	□□□□□ -1.64
SHE3	YBR130C	BCS1	P32839	456 aa		4.83	□□□□□ -1.64
SHE3	YBR130C	CNS1	P33313	385 aa		4.83	□□□□□ -1.64
SHE3	YBR130C	NUP120	P35729	1037 aa		4.83	□□□□□ -1.64
SHE3	YBR130C	DHR2	P36009	735 aa	Predicted RBP	4.83	□□□□□ -1.64
SHE3	YBR130C	FMO1	P38866	432 aa		4.83	□□□□□ -1.64
SHE3	YBR130C	LYS9	P38999	446 aa		4.83	□□□□□ -1.64
SHE3	YBR130C	YJL193W	P39542	402 aa		4.83	□□□□□ -1.64
SHE3	YBR130C	CTF18	P49956	741 aa		4.83	□□□□□ -1.64
SHE3	YBR130C	ACS1	Q01574	713 aa		4.83	□□□□□ -1.64
SHE3	YBR130C	SPC19	Q03954	165 aa		4.83	□□□□□ -1.64
SHE3	YBR130C	URN1	Q06525	465 aa	Known RBP	4.83	□□□□□ -1.64
SHE3	YBR130C	CHS5	Q12114	671 aa	Known RBP	4.83	□□□□□ -1.64
SHE3	YBR130C	NBP2	Q12163	236 aa		4.83	□□□□□ -1.64
SHE3	YBR130C	TUB2	P02557	457 aa	Known RBP	4.82	□□□□□ -1.64
SHE3	YBR130C	PMA1	P05030	918 aa	Known RBP	4.82	□□□□□ -1.64
SHE3	YBR130C	SNF1	P06782	633 aa	Known RBP	4.82	□□□□□ -1.64
SHE3	YBR130C	ADE3	P07245	946 aa	Known RBP	4.82	□□□□□ -1.64
SHE3	YBR130C	ABF1	P14164	731 aa		4.82	□□□□□ -1.64
SHE3	YBR130C	BET2	P20133	325 aa		4.82	□□□□□ -1.64
SHE3	YBR130C	HCM1	P25364	564 aa		4.82	□□□□□ -1.64
SHE3	YBR130C	MPE1	P35728	441 aa	Known RBP	4.82	□□□□□ -1.64
SHE3	YBR130C	CDS1	P38221	457 aa		4.82	□□□□□ -1.64
SHE3	YBR130C	YER010C	P40011	234 aa		4.82	□□□□□ -1.64
SHE3	YBR130C	SKP2	P42843	763 aa		4.82	□□□□□ -1.64
SHE3	YBR130C	POL31	P46957	487 aa		4.82	□□□□□ -1.64
SHE3	YBR130C	YAP1802	P53309	568 aa		4.82	□□□□□ -1.64
SHE3	YBR130C	CBK1	P53894	756 aa		4.82	□□□□□ -1.64
SHE3	YBR130C	YPL108W	Q02872	168 aa	Predicted RBP	4.82	□□□□□ -1.64
SHE3	YBR130C	TRS31	Q03337	283 aa		4.82	□□□□□ -1.64
SHE3	YBR130C	MED1	Q12321	566 aa		4.82	□□□□□ -1.64
SHE3	YBR130C	TPK1	P06244	397 aa		4.81	□□□□□ -1.64
SHE3	YBR130C	BIK1	P11709	440 aa		4.81	□□□□□ -1.64
SHE3	YBR130C	TUP1	P16649	713 aa		4.81	□□□□□ -1.64
SHE3	YBR130C	PRP45	P28004	379 aa	Predicted RBP	4.81	□□□□□ -1.64
SHE3	YBR130C	FRD1	P32614	470 aa	Known RBP	4.81	□□□□□ -1.64
SHE3	YBR130C	HIS7	P33734	552 aa	Known RBP	4.81	□□□□□ -1.64
SHE3	YBR130C	HOS4	P40480	1083 aa		4.81	□□□□□ -1.64
SHE3	YBR130C	IDS2	P46958	469 aa		4.81	□□□□□ -1.64
SHE3	YBR130C	YDL183C	P48569	320 aa		4.81	□□□□□ -1.64
SHE3	YBR130C	UBC11	P52492	156 aa		4.81	□□□□□ -1.64
SHE3	YBR130C	ERG5	P54781	538 aa		4.81	□□□□□ -1.64
SHE3	YBR130C	YKL033W-A	Q86ZR7	236 aa		4.81	□□□□□ -1.64
SHE3	YBR130C	FUM1	P08417	488 aa	Known RBP	4.8	□□□□□ -1.64
SHE3	YBR130C	RPS7A	P26786	190 aa	Known RBP	4.8	□□□□□ -1.64
SHE3	YBR130C	ARP2	P32381	391 aa	Known RBP	4.8	□□□□□ -1.64
SHE3	YBR130C	YBR053C	P38235	358 aa		4.8	□□□□□ -1.64
SHE3	YBR130C	YBR138C	P38277	524 aa		4.8	□□□□□ -1.64
SHE3	YBR130C	EHT1	P38295	451 aa		4.8	□□□□□ -1.64
SHE3	YBR130C	BCD1	P38772	366 aa		4.8	□□□□□ -1.64
SHE3	YBR130C	NOP16	P40007	231 aa	Known RBP	4.8	□□□□□ -1.64
SHE3	YBR130C	TMN3	P40071	706 aa		4.8	□□□□□ -1.64
SHE3	YBR130C	LRO1	P40345	661 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms