RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W TY1A-BRQ12217 440 aa6.15□□□□□ -1.42
SHP1YBL058W SVS1Q12254 260 aa6.15□□□□□ -1.42
SHP1YBL058W TY1A-NL2Q12470 440 aa6.15□□□□□ -1.42
SHP1YBL058W TY1A-GR2Q12485 440 aa6.15□□□□□ -1.42
SHP1YBL058W DDP1Q99321 188 aaKnown RBP6.15□□□□□ -1.42
SHP1YBL058W CCP1P00431 361 aa6.14□□□□□ -1.43
SHP1YBL058W AEP2P22136 580 aa6.14□□□□□ -1.43
SHP1YBL058W PDR3P33200 976 aa6.14□□□□□ -1.43
SHP1YBL058W MRPL40P36534 297 aa6.14□□□□□ -1.43
SHP1YBL058W CBR1P38626 284 aaKnown RBP6.14□□□□□ -1.43
SHP1YBL058W OCA5P38738 679 aa6.14□□□□□ -1.43
SHP1YBL058W DYS1P38791 387 aa6.14□□□□□ -1.43
SHP1YBL058W EXO1P39875 702 aa6.14□□□□□ -1.43
SHP1YBL058W PAC1P39946 494 aaKnown RBP6.14□□□□□ -1.43
SHP1YBL058W SLX8P40072 274 aa6.14□□□□□ -1.43
SHP1YBL058W IML2P47031 731 aa6.14□□□□□ -1.43
SHP1YBL058W TRM112P53738 135 aaPredicted RBP6.14□□□□□ -1.43
SHP1YBL058W YAT1P80235 687 aa6.14□□□□□ -1.43
SHP1YBL058W PEX13P80667 386 aa6.14□□□□□ -1.43
SHP1YBL058W RPN4Q03465 531 aa6.14□□□□□ -1.43
SHP1YBL058W YMR206WQ03695 313 aa6.14□□□□□ -1.43
SHP1YBL058W TAF9Q05027 157 aa6.14□□□□□ -1.43
SHP1YBL058W YSH1Q06224 779 aaPredicted RBP6.14□□□□□ -1.43
SHP1YBL058W SIL1Q08199 421 aa6.14□□□□□ -1.43
SHP1YBL058W NDD1Q08887 554 aa6.14□□□□□ -1.43
SHP1YBL058W ARP7Q12406 477 aa6.14□□□□□ -1.43
SHP1YBL058W JIP3O13555 125 aa6.13□□□□□ -1.43
SHP1YBL058W SEC2P17065 759 aa6.13□□□□□ -1.43
SHP1YBL058W MET22P32179 357 aa6.13□□□□□ -1.43
SHP1YBL058W PYC2P32327 1180 aaKnown RBP6.13□□□□□ -1.43
SHP1YBL058W TYE7P33122 291 aaPredicted RBP6.13□□□□□ -1.43
SHP1YBL058W STU2P46675 888 aa6.13□□□□□ -1.43
SHP1YBL058W MRX6P48564 524 aa6.13□□□□□ -1.43
SHP1YBL058W EBS1Q03466 884 aaKnown RBP6.13□□□□□ -1.43
SHP1YBL058W RSB1Q08417 382 aa6.13□□□□□ -1.43
SHP1YBL058W YOL098CQ12496 1037 aa6.13□□□□□ -1.43
SHP1YBL058W PPR1P07272 904 aaPredicted RBP6.12□□□□□ -1.43
SHP1YBL058W YER152CP10356 443 aa6.12□□□□□ -1.43
SHP1YBL058W PCT1P13259 424 aa6.12□□□□□ -1.43
SHP1YBL058W APL1P27351 700 aa6.12□□□□□ -1.43
SHP1YBL058W GUT2P32191 649 aa6.12□□□□□ -1.43
SHP1YBL058W ELM1P32801 640 aa6.12□□□□□ -1.43
SHP1YBL058W EFM2P38347 419 aa6.12□□□□□ -1.43
SHP1YBL058W CCT5P40413 562 aaKnown RBP6.12□□□□□ -1.43
SHP1YBL058W YIR014WP40570 242 aa6.12□□□□□ -1.43
SHP1YBL058W RTT101P47050 842 aa6.12□□□□□ -1.43
SHP1YBL058W COP1P53622 1201 aaKnown RBP6.12□□□□□ -1.43
SHP1YBL058W AGE1Q04412 482 aa6.12□□□□□ -1.43
SHP1YBL058W AIM32Q04689 311 aa6.12□□□□□ -1.43
SHP1YBL058W SPO75Q07798 868 aa6.12□□□□□ -1.43
SHP1YBL058W EMP46Q12396 444 aa6.12□□□□□ -1.43
SHP1YBL058W TRS33Q99394 268 aa6.12□□□□□ -1.43
SHP1YBL058W PAB1P04147 577 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
SHP1YBL058W PYC1P11154 1178 aaKnown RBP6.11□□□□□ -1.43
SHP1YBL058W SEC63P14906 663 aa6.11□□□□□ -1.43
SHP1YBL058W MRC1P25588 1096 aa6.11□□□□□ -1.43
SHP1YBL058W GYP6P32806 458 aa6.11□□□□□ -1.43
SHP1YBL058W MRP4P32902 394 aa6.11□□□□□ -1.43
SHP1YBL058W TGL4P36165 910 aa6.11□□□□□ -1.43
SHP1YBL058W URA8P38627 578 aaPredicted RBP6.11□□□□□ -1.43
SHP1YBL058W LEU5P38702 357 aa6.11□□□□□ -1.43
SHP1YBL058W QNS1P38795 714 aaKnown RBP6.11□□□□□ -1.43
SHP1YBL058W SAK1P38990 1142 aa6.11□□□□□ -1.43
SHP1YBL058W BDH2P39713 417 aa6.11□□□□□ -1.43
SHP1YBL058W YER158CP40095 573 aa6.11□□□□□ -1.43
SHP1YBL058W ATG3P40344 310 aa6.11□□□□□ -1.43
SHP1YBL058W SDS3P40505 327 aa6.11□□□□□ -1.43
SHP1YBL058W HYR1P40581 163 aaKnown RBP6.11□□□□□ -1.43
SHP1YBL058W YPS6P40583 537 aa6.11□□□□□ -1.43
SHP1YBL058W CIR1P42940 261 aa6.11□□□□□ -1.43
SHP1YBL058W YJR079WP47126 109 aa6.11□□□□□ -1.43
SHP1YBL058W PRP24P49960 444 aaKnown RBP6.11□□□□□ -1.43
SHP1YBL058W MNN10P50108 393 aaKnown RBP6.11□□□□□ -1.43
SHP1YBL058W HOP2P53187 214 aa6.11□□□□□ -1.43
SHP1YBL058W HST1P53685 503 aa6.11□□□□□ -1.43
SHP1YBL058W AQR1P53943 586 aa6.11□□□□□ -1.43
SHP1YBL058W YMR187CQ03236 431 aa6.11□□□□□ -1.43
SHP1YBL058W LCB5Q06147 687 aaKnown RBP6.11□□□□□ -1.43
SHP1YBL058W YCS4Q06156 1176 aa6.11□□□□□ -1.43
SHP1YBL058W YLR012CQ07927 99 aa6.11□□□□□ -1.43
SHP1YBL058W HMI1Q12039 706 aa6.11□□□□□ -1.43
SHP1YBL058W PUF2Q12221 1075 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
SHP1YBL058W YPR015CQ12531 247 aa6.11□□□□□ -1.43
SHP1YBL058W RPS3P05750 240 aaKnown RBP6.1□□□□□ -1.43
SHP1YBL058W CDC37P06101 506 aaKnown RBP6.1□□□□□ -1.43
SHP1YBL058W ADE3P07245 946 aaKnown RBP6.1□□□□□ -1.43
SHP1YBL058W CYC8P14922 966 aa6.1□□□□□ -1.43
SHP1YBL058W PUF4P25339 888 aaKnown RBP RIP-Chip data6.1□□□□□ -1.43not detected
SHP1YBL058W HSL7P38274 827 aa6.1□□□□□ -1.43
SHP1YBL058W PFS1P38872 237 aa6.1□□□□□ -1.43
SHP1YBL058W TIF34P40217 347 aaKnown RBP6.1□□□□□ -1.43
SHP1YBL058W SER33P40510 469 aa6.1□□□□□ -1.43
SHP1YBL058W PHO86P46956 311 aa6.1□□□□□ -1.43
SHP1YBL058W AIM23P47015 356 aa6.1□□□□□ -1.43
SHP1YBL058W YPR097WQ06839 1073 aa6.1□□□□□ -1.43
SHP1YBL058W NOB1Q08444 459 aaKnown RBP6.1□□□□□ -1.43
SHP1YBL058W RTK1Q12100 620 aaPredicted RBP6.1□□□□□ -1.43
SHP1YBL058W PER33Q12144 273 aa6.1□□□□□ -1.43
SHP1YBL058W CSF1Q12150 2958 aa6.1□□□□□ -1.43
SHP1YBL058W CDC33P07260 213 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 80.3 ms