RNA–Protein interactions for RNA: YBL024W

NCL1, Transcript of S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase, yeast

Gene NCL1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCL1	YBL024W	GTR1	Q00582	310 aa		2.63	□□□□□ -1.99
NCL1	YBL024W	ACS1	Q01574	713 aa		2.63	□□□□□ -1.99
NCL1	YBL024W	TIM50	Q02776	476 aa		2.63	□□□□□ -1.99
NCL1	YBL024W	EIS1	Q05050	843 aa	Known RBP	2.63	□□□□□ -1.99
NCL1	YBL024W	YFT2	Q06676	274 aa		2.63	□□□□□ -1.99
NCL1	YBL024W	YCG1	Q06680	1035 aa		2.63	□□□□□ -1.99
NCL1	YBL024W	SSP2	Q08646	371 aa		2.63	□□□□□ -1.99
NCL1	YBL024W	HOS1	Q12214	470 aa		2.63	□□□□□ -1.99
NCL1	YBL024W	GFA1	P14742	717 aa	Known RBP	2.62	□□□□□ -1.99
NCL1	YBL024W	MCM3	P24279	971 aa	Known RBP	2.62	□□□□□ -1.99
NCL1	YBL024W	FEN2	P25621	512 aa	Known RBP	2.62	□□□□□ -1.99
NCL1	YBL024W	SSH4	P32343	579 aa		2.62	□□□□□ -1.99
NCL1	YBL024W	CBR1	P38626	284 aa	Known RBP	2.62	□□□□□ -1.99
NCL1	YBL024W	REV7	P38927	245 aa		2.62	□□□□□ -1.99
NCL1	YBL024W	CCT3	P39077	534 aa	Known RBP	2.62	□□□□□ -1.99
NCL1	YBL024W	RFX1	P48743	811 aa		2.62	□□□□□ -1.99
NCL1	YBL024W	CPR6	P53691	371 aa	Known RBP	2.62	□□□□□ -1.99
NCL1	YBL024W	ARC35	P53731	342 aa	Known RBP	2.62	□□□□□ -1.99
NCL1	YBL024W	SSL2	Q00578	843 aa		2.62	□□□□□ -1.99
NCL1	YBL024W	TRI1	Q05024	226 aa		2.62	□□□□□ -1.99
NCL1	YBL024W	BLS1	Q06071	122 aa		2.62	□□□□□ -1.99
NCL1	YBL024W	NCP1	P16603	691 aa	Known RBP	2.62	□□□□□ -1.99
NCL1	YBL024W	SEC15	P22224	910 aa		2.62	□□□□□ -1.99
NCL1	YBL024W	MVD1	P32377	396 aa	Known RBP	2.62	□□□□□ -1.99
NCL1	YBL024W	TAF5	P38129	798 aa		2.62	□□□□□ -1.99
NCL1	YBL024W	YLF2	P38746	405 aa		2.62	□□□□□ -1.99
NCL1	YBL024W	BCD1	P38772	366 aa		2.62	□□□□□ -1.99
NCL1	YBL024W	FMP52	P40008	231 aa		2.62	□□□□□ -1.99
NCL1	YBL024W	PUG1	P40100	303 aa		2.62	□□□□□ -1.99
NCL1	YBL024W	UBC11	P52492	156 aa		2.62	□□□□□ -1.99
NCL1	YBL024W	MDR1	P53258	950 aa		2.62	□□□□□ -1.99
NCL1	YBL024W	TMA64	Q04600	565 aa	Known RBP	2.62	□□□□□ -1.99
NCL1	YBL024W	PHO5	P00635	467 aa		2.61	□□□□□ -1.99
NCL1	YBL024W	POL3	P15436	1097 aa		2.61	□□□□□ -1.99
NCL1	YBL024W	SIR1	P21691	654 aa		2.61	□□□□□ -1.99
NCL1	YBL024W	RPA135	P22138	1203 aa	Known RBP	2.61	□□□□□ -1.99
NCL1	YBL024W	KIN3	P22209	435 aa		2.61	□□□□□ -1.99
NCL1	YBL024W	SWI4	P25302	1093 aa	Known RBP	2.61	□□□□□ -1.99
NCL1	YBL024W	MSS1	P32559	526 aa	Predicted RBP	2.61	□□□□□ -1.99
NCL1	YBL024W	FRD1	P32614	470 aa	Known RBP	2.61	□□□□□ -1.99
NCL1	YBL024W	YBR138C	P38277	524 aa		2.61	□□□□□ -1.99
NCL1	YBL024W	SFB3	P38810	929 aa		2.61	□□□□□ -1.99
NCL1	YBL024W	GSM1	P42950	618 aa		2.61	□□□□□ -1.99
NCL1	YBL024W	IML2	P47031	731 aa		2.61	□□□□□ -1.99
NCL1	YBL024W	BNA1	P47096	177 aa		2.61	□□□□□ -1.99
NCL1	YBL024W	TEL2	P53038	688 aa		2.61	□□□□□ -1.99
NCL1	YBL024W	YAP1802	P53309	568 aa		2.61	□□□□□ -1.99
NCL1	YBL024W	AAD4	Q07747	329 aa		2.61	□□□□□ -1.99
NCL1	YBL024W	MRH1	Q12117	320 aa	Predicted RBP	2.61	□□□□□ -1.99
NCL1	YBL024W	PSY4	P38193	441 aa		2.61	□□□□□ -1.99
NCL1	YBL024W	TMN3	P40071	706 aa		2.61	□□□□□ -1.99
NCL1	YBL024W	PIG2	P40187	538 aa		2.61	□□□□□ -1.99
NCL1	YBL024W	PAN2	P53010	1115 aa	Predicted RBP	2.61	□□□□□ -1.99
NCL1	YBL024W	FDC1	Q03034	503 aa		2.61	□□□□□ -1.99
NCL1	YBL024W	IWR1	Q07532	353 aa	Predicted RBP	2.61	□□□□□ -1.99
NCL1	YBL024W	AIM41	Q12032	185 aa		2.61	□□□□□ -1.99
NCL1	YBL024W	CHS5	Q12114	671 aa	Known RBP	2.61	□□□□□ -1.99
NCL1	YBL024W	ZRT2	Q12436	422 aa		2.61	□□□□□ -1.99
NCL1	YBL024W	ADE3	P07245	946 aa	Known RBP	2.6	□□□□□ -1.99
NCL1	YBL024W	DMC1	P25453	334 aa		2.6	□□□□□ -1.99
NCL1	YBL024W	YCL049C	P25577	312 aa		2.6	□□□□□ -1.99
NCL1	YBL024W	MCM10	P32354	571 aa		2.6	□□□□□ -1.99
NCL1	YBL024W	YPT53	P36019	220 aa		2.6	□□□□□ -1.99
NCL1	YBL024W	STB5	P38699	743 aa		2.6	□□□□□ -1.99
NCL1	YBL024W	ATF1	P40353	525 aa		2.6	□□□□□ -1.99
NCL1	YBL024W	POL31	P46957	487 aa		2.6	□□□□□ -1.99
NCL1	YBL024W	MPS3	P47069	682 aa		2.6	□□□□□ -1.99
NCL1	YBL024W	MRPL13	Q02204	264 aa		2.6	□□□□□ -1.99
NCL1	YBL024W	TFC6	Q06339	672 aa		2.6	□□□□□ -1.99
NCL1	YBL024W	ARR3	Q06598	404 aa		2.6	□□□□□ -1.99
NCL1	YBL024W	MLH3	Q12083	715 aa		2.6	□□□□□ -1.99
NCL1	YBL024W	SSM4	P40318	1319 aa		2.6	□□□□□ -1.99
NCL1	YBL024W	SIR3	P06701	978 aa		2.59	□□□□□ -1.99
NCL1	YBL024W	NUC1	P08466	329 aa		2.59	□□□□□ -1.99
NCL1	YBL024W	MTF2	P10849	440 aa		2.59	□□□□□ -1.99
NCL1	YBL024W	PCK1	P10963	549 aa		2.59	□□□□□ -1.99
NCL1	YBL024W	PRP28	P23394	588 aa		2.59	□□□□□ -1.99
NCL1	YBL024W	CLB4	P24871	460 aa		2.59	□□□□□ -1.99
NCL1	YBL024W	PHO11	P35842	467 aa		2.59	□□□□□ -1.99
NCL1	YBL024W	IFA38	P38286	347 aa		2.59	□□□□□ -1.99
NCL1	YBL024W	PHO12	P38693	467 aa		2.59	□□□□□ -1.99
NCL1	YBL024W	ERP2	P39704	215 aa		2.59	□□□□□ -1.99
NCL1	YBL024W	LRO1	P40345	661 aa		2.59	□□□□□ -1.99
NCL1	YBL024W	SMK1	P41808	388 aa		2.59	□□□□□ -1.99
NCL1	YBL024W	RRT6	P53117	311 aa	Predicted RBP	2.59	□□□□□ -1.99
NCL1	YBL024W	YGR054W	P53235	642 aa	Known RBP	2.59	□□□□□ -1.99
NCL1	YBL024W	YML122C	Q03207	126 aa		2.59	□□□□□ -1.99
NCL1	YBL024W	CRD1	Q07560	283 aa		2.59	□□□□□ -1.99
NCL1	YBL024W	YOL087C	Q99247	1116 aa		2.59	□□□□□ -1.99
NCL1	YBL024W	TUF1	P02992	437 aa	Known RBP	2.59	□□□□□ -2
NCL1	YBL024W	MIS1	P09440	975 aa	Known RBP	2.59	□□□□□ -2
NCL1	YBL024W	VPS33	P20795	691 aa		2.59	□□□□□ -2
NCL1	YBL024W	UBC1	P21734	215 aa	Known RBP	2.59	□□□□□ -2
NCL1	YBL024W	RIT1	P23796	513 aa		2.59	□□□□□ -2
NCL1	YBL024W	SET3	P36124	751 aa		2.59	□□□□□ -2
NCL1	YBL024W	TDP1	P38319	544 aa		2.59	□□□□□ -2
NCL1	YBL024W	PPE1	P38796	400 aa		2.59	□□□□□ -2
NCL1	YBL024W	KHA1	P40309	873 aa		2.59	□□□□□ -2
NCL1	YBL024W	FHN1	P53279	174 aa		2.59	□□□□□ -2
NCL1	YBL024W	MEP3	P53390	489 aa		2.59	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms