RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 STAG1Q8WVM7 1258 aa27.75■■■□□ 2.03
HOXA4-204ENST00000610970 POLR3EQ9NVU0 708 aa27.75■■■□□ 2.03
HOXA4-204ENST00000610970 NARFQ9UHQ1 456 aa27.75■■■□□ 2.03
HOXA4-204ENST00000610970 TRPC5Q9UL62 973 aaPredicted RBP27.75■■■□□ 2.03
HOXA4-204ENST00000610970 NID2Q14112 1375 aa27.75■■■□□ 2.03
HOXA4-204ENST00000610970 SNAP23O00161 211 aa27.75■■■□□ 2.03
HOXA4-204ENST00000610970 OFD1O75665 1012 aa27.75■■■□□ 2.03
HOXA4-204ENST00000610970 GUCY1B3Q02153 619 aa27.75■■■□□ 2.03
HOXA4-204ENST00000610970 KCNG4Q8TDN1 519 aa27.75■■■□□ 2.03
HOXA4-204ENST00000610970 RNF41Q9H4P4 317 aaPredicted RBP27.75■■■□□ 2.03
HOXA4-204ENST00000610970 ZBTB43O43298 467 aa27.74■■■□□ 2.03
HOXA4-204ENST00000610970 CAVIN4Q5BKX8 364 aa27.74■■■□□ 2.03
HOXA4-204ENST00000610970 MFSD6Q6ZSS7 791 aa27.74■■■□□ 2.03
HOXA4-204ENST00000610970 LY9Q9HBG7 655 aa27.74■■■□□ 2.03
HOXA4-204ENST00000610970 SLC4A4Q9Y6R1 1079 aa27.74■■■□□ 2.03
HOXA4-204ENST00000610970 NEDD4P46934 1319 aa27.74■■■□□ 2.03
HOXA4-204ENST00000610970 SEMA3EO15041 775 aa27.73■■■□□ 2.03
HOXA4-204ENST00000610970 RBM6P78332 1123 aaKnown RBP27.73■■■□□ 2.03
HOXA4-204ENST00000610970 CEBPZQ03701 1054 aaKnown RBP27.73■■■□□ 2.03
HOXA4-204ENST00000610970 FAM160A1Q05DH4 1040 aa27.73■■■□□ 2.03
HOXA4-204ENST00000610970 TMEM67Q5HYA8 995 aa27.73■■■□□ 2.03
HOXA4-204ENST00000610970 ADALQ6DHV7 355 aa27.73■■■□□ 2.03
HOXA4-204ENST00000610970 CASZ1Q86V15 1759 aa27.73■■■□□ 2.03
HOXA4-204ENST00000610970 RCAN1P53805 252 aa27.72■■■□□ 2.03
HOXA4-204ENST00000610970 CKAP2LQ8IYA6 745 aa27.72■■■□□ 2.03
HOXA4-204ENST00000610970 TMTC2Q8N394 836 aa27.72■■■□□ 2.03
HOXA4-204ENST00000610970 DENND2AQ9ULE3 1009 aa27.72■■■□□ 2.03
HOXA4-204ENST00000610970 STK36Q9NRP7 1315 aa27.72■■■□□ 2.03
HOXA4-204ENST00000610970 THSD7AQ9UPZ6 1657 aa27.72■■■□□ 2.03
HOXA4-204ENST00000610970 ZBTB22O15209 634 aa27.72■■■□□ 2.03
HOXA4-204ENST00000610970 GTF2E1P29083 439 aaPredicted RBP27.72■■■□□ 2.03
HOXA4-204ENST00000610970 ME1P48163 572 aa27.72■■■□□ 2.03
HOXA4-204ENST00000610970 TDO2P48775 406 aa27.72■■■□□ 2.03
HOXA4-204ENST00000610970 SART3Q15020 963 aaKnown RBP27.72■■■□□ 2.03
HOXA4-204ENST00000610970 TMED8Q6PL24 325 aaPredicted RBP27.72■■■□□ 2.03
HOXA4-204ENST00000610970 SYNE3Q6ZMZ3 975 aa27.72■■■□□ 2.03
HOXA4-204ENST00000610970 NFXL1Q6ZNB6 911 aa27.72■■■□□ 2.03
HOXA4-204ENST00000610970 PDS5AQ29RF7 1337 aaKnown RBP27.72■■■□□ 2.03
HOXA4-204ENST00000610970 COL24A1Q17RW2 1714 aa27.71■■■□□ 2.03
HOXA4-204ENST00000610970 MYSM1Q5VVJ2 828 aa27.71■■■□□ 2.03
HOXA4-204ENST00000610970 LCORLQ8N3X6 602 aa27.71■■■□□ 2.03
HOXA4-204ENST00000610970 LINC00301Q8NCQ3 95 aa27.71■■■□□ 2.03
HOXA4-204ENST00000610970 ENGASEQ8NFI3 743 aa27.71■■■□□ 2.03
HOXA4-204ENST00000610970 ZSWIM5Q9P217 1185 aa27.71■■■□□ 2.03
HOXA4-204ENST00000610970 MINPP1Q9UNW1 487 aa27.71■■■□□ 2.03
HOXA4-204ENST00000610970 NHSQ6T4R5 1651 aa27.71■■■□□ 2.03
HOXA4-204ENST00000610970 KINO60870 393 aaKnown RBP27.7■■■□□ 2.03
HOXA4-204ENST00000610970 CYP7A1P22680 504 aa27.7■■■□□ 2.03
HOXA4-204ENST00000610970 ANO6Q4KMQ2 910 aa27.7■■■□□ 2.03
HOXA4-204ENST00000610970 CCDC69A6NI79 296 aa27.7■■■□□ 2.02
HOXA4-204ENST00000610970 IFIT3O14879 490 aaKnown RBP27.7■■■□□ 2.02
HOXA4-204ENST00000610970 KIF23Q02241 960 aaPredicted RBP27.7■■■□□ 2.02
HOXA4-204ENST00000610970 MRPS27Q92552 414 aaKnown RBP27.7■■■□□ 2.02
HOXA4-204ENST00000610970 WASF1Q92558 559 aa27.7■■■□□ 2.02
HOXA4-204ENST00000610970 ALG1Q9BT22 464 aa27.7■■■□□ 2.02
HOXA4-204ENST00000610970 BCL2L12Q9HB09 334 aa27.7■■■□□ 2.02
HOXA4-204ENST00000610970 ANAPC4Q9UJX5 808 aa27.7■■■□□ 2.02
HOXA4-204ENST00000610970 SLC12A7Q9Y666 1083 aa27.7■■■□□ 2.02
HOXA4-204ENST00000610970 GOLGA8AA7E2F4 631 aa27.69■■■□□ 2.02
HOXA4-204ENST00000610970 GOLGA6L6A8MZA4 724 aa27.69■■■□□ 2.02
HOXA4-204ENST00000610970 CTDSPL2Q05D32 466 aa27.69■■■□□ 2.02
HOXA4-204ENST00000610970 SNW1Q13573 536 aaKnown RBP27.69■■■□□ 2.02
HOXA4-204ENST00000610970 STK38Q15208 465 aa27.69■■■□□ 2.02
HOXA4-204ENST00000610970 TBC1D9BQ66K14 1250 aa27.69■■■□□ 2.02
HOXA4-204ENST00000610970 TDRD7Q8NHU6 1098 aaKnown RBP27.69■■■□□ 2.02
HOXA4-204ENST00000610970 NAP1L5Q96NT1 182 aaPredicted RBP27.69■■■□□ 2.02
HOXA4-204ENST00000610970 NLRP3Q96P20 1036 aa27.69■■■□□ 2.02
HOXA4-204ENST00000610970 SETDB2Q96T68 719 aa27.69■■■□□ 2.02
HOXA4-204ENST00000610970 CBX8Q9HC52 389 aa27.69■■■□□ 2.02
HOXA4-204ENST00000610970 PCDHA7Q9UN72 937 aa27.69■■■□□ 2.02
HOXA4-204ENST00000610970 BTAF1O14981 1849 aa27.68■■■□□ 2.02
HOXA4-204ENST00000610970 IARSP41252 1262 aaKnown RBP27.68■■■□□ 2.02
HOXA4-204ENST00000610970 TERF1P54274 439 aa27.68■■■□□ 2.02
HOXA4-204ENST00000610970 FSIP1Q8NA03 581 aa27.68■■■□□ 2.02
HOXA4-204ENST00000610970 FTOQ9C0B1 505 aaKnown RBP eCLIP27.68■■■□□ 2.02
HOXA4-204ENST00000610970 ANKRD2Q9GZV1 360 aa27.68■■■□□ 2.02
HOXA4-204ENST00000610970 MAGEB6P1A0A0J9YX57 407 aa27.67■■■□□ 2.02
HOXA4-204ENST00000610970 SF3A1Q15459 793 aaKnown RBP27.67■■■□□ 2.02
HOXA4-204ENST00000610970 NTRK3Q16288 839 aa27.67■■■□□ 2.02
HOXA4-204ENST00000610970 GOLPH3LQ9H4A5 285 aa27.67■■■□□ 2.02
HOXA4-204ENST00000610970 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.67■■■□□ 2.02
HOXA4-204ENST00000610970 ERICH2A1L162 156 aa27.67■■■□□ 2.02
HOXA4-204ENST00000610970 IGSF3O75054 1194 aa27.67■■■□□ 2.02
HOXA4-204ENST00000610970 ZPR1O75312 459 aa27.67■■■□□ 2.02
HOXA4-204ENST00000610970 KIAA2012Q0VF49 1180 aa27.67■■■□□ 2.02
HOXA4-204ENST00000610970 C3orf67Q6ZVT6 689 aa27.67■■■□□ 2.02
HOXA4-204ENST00000610970 COL4A1P02462 1669 aa27.66■■■□□ 2.02
HOXA4-204ENST00000610970 SPTLC2O15270 562 aa27.66■■■□□ 2.02
HOXA4-204ENST00000610970 PRKAB2O43741 272 aa27.66■■■□□ 2.02
HOXA4-204ENST00000610970 ONECUT3O60422 494 aaPredicted RBP27.66■■■□□ 2.02
HOXA4-204ENST00000610970 PPFIA3O75145 1194 aa27.66■■■□□ 2.02
HOXA4-204ENST00000610970 RPS8P62241 208 aaKnown RBP27.66■■■□□ 2.02
HOXA4-204ENST00000610970 TRIM29Q14134 588 aa27.66■■■□□ 2.02
HOXA4-204ENST00000610970 STX1AQ16623 288 aa27.66■■■□□ 2.02
HOXA4-204ENST00000610970 OTUD7BQ6GQQ9 843 aa27.66■■■□□ 2.02
HOXA4-204ENST00000610970 FBXO33Q7Z6M2 555 aa27.66■■■□□ 2.02
HOXA4-204ENST00000610970 VPS37DQ86XT2 251 aa27.66■■■□□ 2.02
HOXA4-204ENST00000610970 RAI14Q9P0K7 980 aa27.66■■■□□ 2.02
HOXA4-204ENST00000610970 PCP11498 1178 aaKnown RBP27.65■■■□□ 2.02
HOXA4-204ENST00000610970 CDC27P30260 824 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms