RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 LCORLQ8N3X6 602 aa18.25■□□□□ 0.51
BRD9-208ENST00000489816 JAG2Q9Y219 1238 aa18.25■□□□□ 0.51
BRD9-208ENST00000489816 LAMB4A4D0S4 1761 aa18.24■□□□□ 0.51
BRD9-208ENST00000489816 CHAF1AQ13111 956 aaPredicted RBP18.24■□□□□ 0.51
BRD9-208ENST00000489816 CEP57L1Q8IYX8 460 aa18.24■□□□□ 0.51
BRD9-208ENST00000489816 ZNF710Q8N1W2 664 aa18.24■□□□□ 0.51
BRD9-208ENST00000489816 PFKFB1P16118 471 aa18.24■□□□□ 0.51
BRD9-208ENST00000489816 LPIN2Q92539 896 aa18.24■□□□□ 0.51
BRD9-208ENST00000489816 NUP188Q5SRE5 1749 aa18.24■□□□□ 0.51
BRD9-208ENST00000489816 KCNQ2O43526 872 aa18.24■□□□□ 0.51
BRD9-208ENST00000489816 RANBP6O60518 1105 aaKnown RBP18.24■□□□□ 0.51
BRD9-208ENST00000489816 SLC3A2P08195 630 aaKnown RBP18.24■□□□□ 0.51
BRD9-208ENST00000489816 TNNT1P13805 278 aa18.24■□□□□ 0.51
BRD9-208ENST00000489816 IARSP41252 1262 aaKnown RBP18.24■□□□□ 0.51
BRD9-208ENST00000489816 MROH7-TTC4A0A0A0MT08 1334 aa18.24■□□□□ 0.51
BRD9-208ENST00000489816 SH2B2O14492 632 aaPredicted RBP18.23■□□□□ 0.51
BRD9-208ENST00000489816 CRKLP46109 303 aaKnown RBP18.23■□□□□ 0.51
BRD9-208ENST00000489816 EVCP57679 992 aa18.23■□□□□ 0.51
BRD9-208ENST00000489816 KIAA1468Q9P260 1216 aa18.23■□□□□ 0.51
BRD9-208ENST00000489816 SLC4A4Q9Y6R1 1079 aa18.23■□□□□ 0.51
BRD9-208ENST00000489816 BAZ2BQ9UIF8 2168 aaKnown RBP18.23■□□□□ 0.51
BRD9-208ENST00000489816 CYP2D7A0A087X1C5 515 aa18.23■□□□□ 0.51
BRD9-208ENST00000489816 CTAGE5O15320 804 aa18.23■□□□□ 0.51
BRD9-208ENST00000489816 GYG1P46976 350 aa18.23■□□□□ 0.51
BRD9-208ENST00000489816 TTF1Q15361 905 aaPredicted RBP18.23■□□□□ 0.51
BRD9-208ENST00000489816 BCL2L12Q9HB09 334 aa18.23■□□□□ 0.51
BRD9-208ENST00000489816 PRDM10Q9NQV6 1147 aa18.23■□□□□ 0.51
BRD9-208ENST00000489816 SLC12A7Q9Y666 1083 aa18.23■□□□□ 0.51
BRD9-208ENST00000489816 PRDM1O75626 825 aa18.22■□□□□ 0.51
BRD9-208ENST00000489816 SKILP12757 684 aa18.22■□□□□ 0.51
BRD9-208ENST00000489816 IGDCC4Q8TDY8 1250 aa18.22■□□□□ 0.51
BRD9-208ENST00000489816 FBXO3Q9UK99 471 aa18.22■□□□□ 0.51
BRD9-208ENST00000489816 NWD2Q9ULI1 1742 aa18.22■□□□□ 0.51
BRD9-208ENST00000489816 BTBD18B2RXH4 712 aa18.22■□□□□ 0.51
BRD9-208ENST00000489816 MAP3K12Q12852 859 aa18.22■□□□□ 0.51
BRD9-208ENST00000489816 IFNKQ9P0W0 207 aa18.22■□□□□ 0.51
BRD9-208ENST00000489816 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.22■□□□□ 0.51
BRD9-208ENST00000489816 V9GYY5 206 aaPredicted RBP18.22■□□□□ 0.51
BRD9-208ENST00000489816 TCRBV5S4A2TA0A5A2 114 aa18.22■□□□□ 0.51
BRD9-208ENST00000489816 CCDC69A6NI79 296 aa18.22■□□□□ 0.51
BRD9-208ENST00000489816 SLC5A1P13866 664 aa18.22■□□□□ 0.51
BRD9-208ENST00000489816 PNOCQ13519 176 aa18.22■□□□□ 0.51
BRD9-208ENST00000489816 UBE3CQ15386 1083 aa18.22■□□□□ 0.51
BRD9-208ENST00000489816 LRRC8AQ8IWT6 810 aa18.22■□□□□ 0.51
BRD9-208ENST00000489816 PDILTQ8N807 584 aa18.22■□□□□ 0.51
BRD9-208ENST00000489816 KCNG4Q8TDN1 519 aa18.22■□□□□ 0.51
BRD9-208ENST00000489816 PRIMPOLQ96LW4 560 aa18.22■□□□□ 0.51
BRD9-208ENST00000489816 CDHR2Q9BYE9 1310 aa18.21■□□□□ 0.51
BRD9-208ENST00000489816 ATP1A3P13637 1013 aa18.21■□□□□ 0.51
BRD9-208ENST00000489816 GLIPR1L2Q4G1C9 344 aa18.21■□□□□ 0.51
BRD9-208ENST00000489816 PARP4Q9UKK3 1724 aaKnown RBP18.21■□□□□ 0.51
BRD9-208ENST00000489816 NPHP1O15259 732 aa18.21■□□□□ 0.51
BRD9-208ENST00000489816 FOXN1O15353 648 aa18.21■□□□□ 0.51
BRD9-208ENST00000489816 ITPK1Q13572 414 aa18.21■□□□□ 0.51
BRD9-208ENST00000489816 AXDND1Q5T1B0 1012 aaPredicted RBP18.21■□□□□ 0.51
BRD9-208ENST00000489816 LY9Q9HBG7 655 aa18.21■□□□□ 0.51
BRD9-208ENST00000489816 TOGARAM1Q9Y4F4 1720 aa18.21■□□□□ 0.51
BRD9-208ENST00000489816 GSG1L2A8MUP6 293 aa18.2■□□□□ 0.5
BRD9-208ENST00000489816 TPM3P06753 285 aa18.2■□□□□ 0.5
BRD9-208ENST00000489816 GRIN1Q05586 938 aa18.2■□□□□ 0.5
BRD9-208ENST00000489816 GOLGA8FQ08AF8 430 aa18.2■□□□□ 0.5
BRD9-208ENST00000489816 GOLGA8DPQ0D2H9 430 aa18.2■□□□□ 0.5
BRD9-208ENST00000489816 ADGRA1Q86SQ6 560 aa18.2■□□□□ 0.5
BRD9-208ENST00000489816 ZNF34Q8IZ26 560 aa18.2■□□□□ 0.5
BRD9-208ENST00000489816 FAM217BQ9NTX9 383 aaPredicted RBP18.2■□□□□ 0.5
BRD9-208ENST00000489816 ZMYM6O95789 1325 aa18.2■□□□□ 0.5
BRD9-208ENST00000489816 EVX2Q03828 476 aa18.2■□□□□ 0.5
BRD9-208ENST00000489816 TRIM29Q14134 588 aa18.2■□□□□ 0.5
BRD9-208ENST00000489816 MFSD6Q6ZSS7 791 aa18.2■□□□□ 0.5
BRD9-208ENST00000489816 UTP14AQ9BVJ6 771 aaKnown RBP18.2■□□□□ 0.5
BRD9-208ENST00000489816 XPO4Q9C0E2 1151 aaKnown RBP18.2■□□□□ 0.5
BRD9-208ENST00000489816 POLR3EQ9NVU0 708 aa18.2■□□□□ 0.5
BRD9-208ENST00000489816 RAI14Q9P0K7 980 aa18.2■□□□□ 0.5
BRD9-208ENST00000489816 BCL9O00512 1426 aa18.2■□□□□ 0.5
BRD9-208ENST00000489816 SPDYE4A6NLX3 237 aa18.2■□□□□ 0.5
BRD9-208ENST00000489816 IL6STP40189 918 aaPredicted RBP18.2■□□□□ 0.5
BRD9-208ENST00000489816 SYKP43405 635 aa18.2■□□□□ 0.5
BRD9-208ENST00000489816 NR5A1Q13285 461 aa18.2■□□□□ 0.5
BRD9-208ENST00000489816 INTS5Q6P9B9 1019 aaKnown RBP18.2■□□□□ 0.5
BRD9-208ENST00000489816 CPLX2Q6PUV4 134 aaKnown RBP18.2■□□□□ 0.5
BRD9-208ENST00000489816 PATL2C9JE40 543 aaKnown RBP18.19■□□□□ 0.5
BRD9-208ENST00000489816 DDB1Q16531 1140 aa18.19■□□□□ 0.5
BRD9-208ENST00000489816 SHC4Q6S5L8 630 aa18.19■□□□□ 0.5
BRD9-208ENST00000489816 C3orf67Q6ZVT6 689 aa18.19■□□□□ 0.5
BRD9-208ENST00000489816 TMC6Q7Z403 805 aa18.19■□□□□ 0.5
BRD9-208ENST00000489816 UBR2Q8IWV8 1755 aa18.19■□□□□ 0.5
BRD9-208ENST00000489816 XIRP1Q702N8 1843 aaKnown RBP18.19■□□□□ 0.5
BRD9-208ENST00000489816 CYP7A1P22680 504 aa18.19■□□□□ 0.5
BRD9-208ENST00000489816 UQCRFS1P1P0C7P4 283 aa18.18■□□□□ 0.5
BRD9-208ENST00000489816 CHRNDQ07001 517 aa18.18■□□□□ 0.5
BRD9-208ENST00000489816 LOC102724428A0A0B4J2F2 783 aa18.18■□□□□ 0.5
BRD9-208ENST00000489816 FGFR2P21802 821 aa18.18■□□□□ 0.5
BRD9-208ENST00000489816 ARID4AP29374 1257 aaPredicted RBP18.18■□□□□ 0.5
BRD9-208ENST00000489816 IGHMBP2P38935 993 aaKnown RBP18.18■□□□□ 0.5
BRD9-208ENST00000489816 EIF5P55010 431 aaKnown RBP18.18■□□□□ 0.5
BRD9-208ENST00000489816 SIK1P57059 783 aa18.18■□□□□ 0.5
BRD9-208ENST00000489816 BRAPQ7Z569 592 aa18.18■□□□□ 0.5
BRD9-208ENST00000489816 CCDC87Q9NVE4 849 aa18.18■□□□□ 0.5
BRD9-208ENST00000489816 YEATS4O95619 227 aa18.18■□□□□ 0.5
BRD9-208ENST00000489816 GTF2E1P29083 439 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 189.2 ms