RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 OPTNQ96CV9 577 aa9.49□□□□□ -0.89
RBM39-218ENST00000449489 CCL15-CCL14A0A0B4J2E2 113 aa9.48□□□□□ -0.89
RBM39-218ENST00000449489 HOXD10P28358 340 aa9.48□□□□□ -0.89
RBM39-218ENST00000449489 RIPK4P57078 832 aa9.48□□□□□ -0.89
RBM39-218ENST00000449489 MAP2K5Q13163 448 aa9.48□□□□□ -0.89
RBM39-218ENST00000449489 MTFR1Q15390 333 aa9.48□□□□□ -0.89
RBM39-218ENST00000449489 CCL15Q16663 113 aa9.48□□□□□ -0.89
RBM39-218ENST00000449489 HDGFL1Q5TGJ6 251 aa9.48□□□□□ -0.89
RBM39-218ENST00000449489 TYW1BQ6NUM6 668 aa9.48□□□□□ -0.89
RBM39-218ENST00000449489 TXNRD3Q86VQ6 643 aa9.48□□□□□ -0.89
RBM39-218ENST00000449489 ZNF428Q96B54 188 aa9.48□□□□□ -0.89
RBM39-218ENST00000449489 LRCH3Q96II8 777 aa9.48□□□□□ -0.89
RBM39-218ENST00000449489 COL25A1Q9BXS0 654 aaPredicted RBP9.48□□□□□ -0.89
RBM39-218ENST00000449489 OTOFQ9HC10 1997 aa9.48□□□□□ -0.89
RBM39-218ENST00000449489 MYH3P11055 1940 aa9.47□□□□□ -0.89
RBM39-218ENST00000449489 GRK4P32298 578 aa9.47□□□□□ -0.89
RBM39-218ENST00000449489 GTF2IP78347 998 aa9.47□□□□□ -0.89
RBM39-218ENST00000449489 TNFAIP1Q13829 316 aa9.47□□□□□ -0.89
RBM39-218ENST00000449489 RASA3Q14644 834 aa9.47□□□□□ -0.89
RBM39-218ENST00000449489 LRIT3Q3SXY7 679 aa9.47□□□□□ -0.89
RBM39-218ENST00000449489 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.47□□□□□ -0.89
RBM39-218ENST00000449489 SPNS2Q8IVW8 549 aa9.47□□□□□ -0.89
RBM39-218ENST00000449489 FAM43AQ8N2R8 423 aa9.47□□□□□ -0.89
RBM39-218ENST00000449489 ANKRD2Q9GZV1 360 aa9.47□□□□□ -0.89
RBM39-218ENST00000449489 SRRDQ9UH36 339 aa9.47□□□□□ -0.89
RBM39-218ENST00000449489 GPR37O15354 613 aa9.46□□□□□ -0.9
RBM39-218ENST00000449489 MYCP01106 439 aaPredicted RBP9.46□□□□□ -0.9
RBM39-218ENST00000449489 CETPP11597 493 aa9.46□□□□□ -0.9
RBM39-218ENST00000449489 TRIM26Q12899 539 aaPredicted RBP9.46□□□□□ -0.9
RBM39-218ENST00000449489 C17orf99Q6UX52 265 aa9.46□□□□□ -0.9
RBM39-218ENST00000449489 C15orf52Q6ZUT6 534 aaKnown RBP9.46□□□□□ -0.9
RBM39-218ENST00000449489 ERICH6Q7L0X2 663 aa9.46□□□□□ -0.9
RBM39-218ENST00000449489 RIC3Q7Z5B4 369 aa9.46□□□□□ -0.9
RBM39-218ENST00000449489 DEFB123Q8N688 67 aa9.46□□□□□ -0.9
RBM39-218ENST00000449489 TTLL11Q8NHH1 800 aa9.46□□□□□ -0.9
RBM39-218ENST00000449489 PRMT6Q96LA8 375 aaPredicted RBP9.46□□□□□ -0.9
RBM39-218ENST00000449489 TRIM47Q96LD4 638 aa9.46□□□□□ -0.9
RBM39-218ENST00000449489 GDF15Q99988 308 aa9.46□□□□□ -0.9
RBM39-218ENST00000449489 ARHGAP39Q9C0H5 1083 aa9.46□□□□□ -0.9
RBM39-218ENST00000449489 ELP3Q9H9T3 547 aa9.46□□□□□ -0.9
RBM39-218ENST00000449489 CWC25Q9NXE8 425 aaPredicted RBP9.46□□□□□ -0.9
RBM39-218ENST00000449489 PIEZO1Q92508 2521 aa9.45□□□□□ -0.9
RBM39-218ENST00000449489 FAM205CA6NFA0 338 aa9.45□□□□□ -0.9
RBM39-218ENST00000449489 SPDYE5A6NIY4 337 aa9.45□□□□□ -0.9
RBM39-218ENST00000449489 FARP2O94887 1054 aaPredicted RBP9.45□□□□□ -0.9
RBM39-218ENST00000449489 SGPL1O95470 568 aa9.45□□□□□ -0.9
RBM39-218ENST00000449489 CCL5P13501 91 aa9.45□□□□□ -0.9
RBM39-218ENST00000449489 CTSWP56202 376 aa9.45□□□□□ -0.9
RBM39-218ENST00000449489 UBXN2AP68543 259 aa9.45□□□□□ -0.9
RBM39-218ENST00000449489 MMRN1Q13201 1228 aa9.45□□□□□ -0.9
RBM39-218ENST00000449489 CFAP100Q494V2 611 aa9.45□□□□□ -0.9
RBM39-218ENST00000449489 ZNF710Q8N1W2 664 aa9.45□□□□□ -0.9
RBM39-218ENST00000449489 CERS5Q8N5B7 392 aa9.45□□□□□ -0.9
RBM39-218ENST00000449489 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.45□□□□□ -0.9
RBM39-218ENST00000449489 U2AF1L4Q8WU68 220 aaKnown RBP9.45□□□□□ -0.9
RBM39-218ENST00000449489 TEPSINQ96N21 525 aa9.45□□□□□ -0.9
RBM39-218ENST00000449489 RNF208Q9H0X6 261 aa9.45□□□□□ -0.9
RBM39-218ENST00000449489 CD209Q9NNX6 404 aa9.45□□□□□ -0.9
RBM39-218ENST00000449489 MTMR10Q9NXD2 777 aa9.45□□□□□ -0.9
RBM39-218ENST00000449489 STAP2Q9UGK3 403 aa9.45□□□□□ -0.9
RBM39-218ENST00000449489 RIPOR2Q9Y4F9 1068 aa9.45□□□□□ -0.9
RBM39-218ENST00000449489 BTBD19C9JJ37 291 aa9.44□□□□□ -0.9
RBM39-218ENST00000449489 MAP3K7O43318 606 aa9.44□□□□□ -0.9
RBM39-218ENST00000449489 IL1R1P14778 569 aa9.44□□□□□ -0.9
RBM39-218ENST00000449489 TMPOP42166 694 aaKnown RBP9.44□□□□□ -0.9
RBM39-218ENST00000449489 PSMC4P43686 418 aa9.44□□□□□ -0.9
RBM39-218ENST00000449489 VGLL4Q14135 290 aa9.44□□□□□ -0.9
RBM39-218ENST00000449489 KRT24Q2M2I5 525 aa9.44□□□□□ -0.9
RBM39-218ENST00000449489 RAET1EQ8TD07 263 aa9.44□□□□□ -0.9
RBM39-218ENST00000449489 CCDC85AQ96PX6 553 aaPredicted RBP9.44□□□□□ -0.9
RBM39-218ENST00000449489 MYD88Q99836 296 aa9.44□□□□□ -0.9
RBM39-218ENST00000449489 CSADQ9Y600 493 aa9.44□□□□□ -0.9
RBM39-218ENST00000449489 ZSWIM8A7E2V4 1837 aa9.44□□□□□ -0.9
RBM39-218ENST00000449489 IRS2Q9Y4H2 1338 aa9.43□□□□□ -0.9
RBM39-218ENST00000449489 CLRN2A0PK11 232 aa9.43□□□□□ -0.9
RBM39-218ENST00000449489 IGHMBP2P38935 993 aaKnown RBP9.43□□□□□ -0.9
RBM39-218ENST00000449489 PTGDRQ13258 359 aa9.43□□□□□ -0.9
RBM39-218ENST00000449489 SNAPC2Q13487 334 aa9.43□□□□□ -0.9
RBM39-218ENST00000449489 ERO1BQ86YB8 467 aa9.43□□□□□ -0.9
RBM39-218ENST00000449489 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.43□□□□□ -0.9
RBM39-218ENST00000449489 HS3ST6Q96QI5 342 aa9.43□□□□□ -0.9
RBM39-218ENST00000449489 METTL22Q9BUU2 404 aaPredicted RBP9.43□□□□□ -0.9
RBM39-218ENST00000449489 CHMP4AQ9BY43 222 aa9.43□□□□□ -0.9
RBM39-218ENST00000449489 GREM2Q9H772 168 aa9.43□□□□□ -0.9
RBM39-218ENST00000449489 VEZTQ9HBM0 779 aa9.43□□□□□ -0.9
RBM39-218ENST00000449489 SERPINA10Q9UK55 444 aa9.43□□□□□ -0.9
RBM39-218ENST00000449489 TRIM66O15016 1216 aa9.42□□□□□ -0.9
RBM39-218ENST00000449489 CTGFP29279 349 aa9.42□□□□□ -0.9
RBM39-218ENST00000449489 PPIL2Q13356 520 aa9.42□□□□□ -0.9
RBM39-218ENST00000449489 PRDM6Q9NQX0 595 aa9.42□□□□□ -0.9
RBM39-218ENST00000449489 PCDHAC2Q9Y5I4 1007 aa9.42□□□□□ -0.9
RBM39-218ENST00000449489 ALPK3Q96L96 1907 aa9.42□□□□□ -0.9
RBM39-218ENST00000449489 SPEF2Q9C093 1822 aa9.42□□□□□ -0.9
RBM39-218ENST00000449489 MYPNQ86TC9 1320 aa9.41□□□□□ -0.9
RBM39-218ENST00000449489 ADGRA2Q96PE1 1338 aa9.41□□□□□ -0.9
RBM39-218ENST00000449489 IRF6O14896 467 aa9.41□□□□□ -0.9
RBM39-218ENST00000449489 FMNL1O95466 1100 aaPredicted RBP9.41□□□□□ -0.9
RBM39-218ENST00000449489 DDX58O95786 925 aaKnown RBP9.41□□□□□ -0.9
RBM39-218ENST00000449489 KLRK1P26718 216 aa9.41□□□□□ -0.9
RBM39-218ENST00000449489 TNNI2P48788 182 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms