RNA–Protein interactions for RNA: ENST00000407583.7

GPN1-202, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best) BASIC

Gene GPN1, Length 1,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-202ENST00000407583 THEGQ9P2T0 379 aa10.89□□□□□ -0.67
GPN1-202ENST00000407583 RBM25P49756 843 aaKnown RBP10.88□□□□□ -0.67
GPN1-202ENST00000407583 SKAP1Q86WV1 359 aa10.88□□□□□ -0.67
GPN1-202ENST00000407583 FBXW7Q969H0 707 aa10.88□□□□□ -0.67
GPN1-202ENST00000407583 RTN4Q9NQC3 1192 aaKnown RBP10.88□□□□□ -0.67
GPN1-202ENST00000407583 GGA1Q9UJY5 639 aa10.88□□□□□ -0.67
GPN1-202ENST00000407583 PPP2R3BQ9Y5P8 575 aa10.88□□□□□ -0.67
GPN1-202ENST00000407583 DNAH12Q6ZR08 3092 aa10.87□□□□□ -0.67
GPN1-202ENST00000407583 DDX60LQ5H9U9 1706 aaKnown RBP10.87□□□□□ -0.67
GPN1-202ENST00000407583 PFASO15067 1338 aa10.87□□□□□ -0.67
GPN1-202ENST00000407583 SH3TC1Q8TE82 1336 aa10.87□□□□□ -0.67
GPN1-202ENST00000407583 CLCN1P35523 988 aa10.87□□□□□ -0.67
GPN1-202ENST00000407583 SUPT20HL1Q3ZLR7 823 aa10.87□□□□□ -0.67
GPN1-202ENST00000407583 TMEM31Q5JXX7 168 aa10.87□□□□□ -0.67
GPN1-202ENST00000407583 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.87□□□□□ -0.67
GPN1-202ENST00000407583 NLRP10Q86W26 655 aa10.87□□□□□ -0.67
GPN1-202ENST00000407583 ZCCHC17Q9NP64 241 aaKnown RBP10.87□□□□□ -0.67
GPN1-202ENST00000407583 ANKIB1Q9P2G1 1089 aa10.87□□□□□ -0.67
GPN1-202ENST00000407583 TRMT112Q9UI30 125 aaKnown RBP10.87□□□□□ -0.67
GPN1-202ENST00000407583 ZNF804BA4D1E1 1349 aa10.86□□□□□ -0.67
GPN1-202ENST00000407583 MRPS5P82675 430 aaKnown RBP10.86□□□□□ -0.67
GPN1-202ENST00000407583 VGLL4Q14135 290 aa10.86□□□□□ -0.67
GPN1-202ENST00000407583 ATF7IPQ6VMQ6 1270 aa10.86□□□□□ -0.67
GPN1-202ENST00000407583 PPM1EQ8WY54 764 aa10.86□□□□□ -0.67
GPN1-202ENST00000407583 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.86□□□□□ -0.67
GPN1-202ENST00000407583 PCDHB15Q9Y5E8 787 aa10.86□□□□□ -0.67
GPN1-202ENST00000407583 MYO3BQ8WXR4 1341 aa10.85□□□□□ -0.67
GPN1-202ENST00000407583 U2SURPO15042 1029 aaKnown RBP10.85□□□□□ -0.67
GPN1-202ENST00000407583 DIAPH1O60610 1272 aaKnown RBP10.85□□□□□ -0.67
GPN1-202ENST00000407583 GRIN2CQ14957 1233 aa10.85□□□□□ -0.67
GPN1-202ENST00000407583 KIAA0825Q8IV33 1275 aa10.85□□□□□ -0.67
GPN1-202ENST00000407583 ARHGAP45Q92619 1136 aa10.85□□□□□ -0.67
GPN1-202ENST00000407583 C11orf16Q9NQ32 467 aa10.85□□□□□ -0.67
GPN1-202ENST00000407583 PCDHAC2Q9Y5I4 1007 aa10.85□□□□□ -0.67
GPN1-202ENST00000407583 DLG5Q8TDM6 1919 aa10.85□□□□□ -0.67
GPN1-202ENST00000407583 CLRN2A0PK11 232 aa10.84□□□□□ -0.67
GPN1-202ENST00000407583 FAM86C2PA6NEL3 165 aa10.84□□□□□ -0.67
GPN1-202ENST00000407583 GOLGA6L22H0YM25 854 aa10.84□□□□□ -0.67
GPN1-202ENST00000407583 CETPP11597 493 aa10.84□□□□□ -0.67
GPN1-202ENST00000407583 FLT3LGP49771 235 aa10.84□□□□□ -0.67
GPN1-202ENST00000407583 FCGRTP55899 365 aa10.84□□□□□ -0.67
GPN1-202ENST00000407583 SMAD3P84022 425 aaKnown RBP10.84□□□□□ -0.67
GPN1-202ENST00000407583 SHHQ15465 462 aa10.84□□□□□ -0.67
GPN1-202ENST00000407583 BMP2KLQ5H9B9 411 aa10.84□□□□□ -0.67
GPN1-202ENST00000407583 MCM10Q7L590 875 aa10.84□□□□□ -0.67
GPN1-202ENST00000407583 SLKQ9H2G2 1235 aaPredicted RBP10.84□□□□□ -0.67
GPN1-202ENST00000407583 WDFY4Q6ZS81 3184 aa10.84□□□□□ -0.67
GPN1-202ENST00000407583 USP34Q70CQ2 3546 aa10.84□□□□□ -0.67
GPN1-202ENST00000407583 AOX1Q06278 1338 aa10.83□□□□□ -0.68
GPN1-202ENST00000407583 SEC24BO95487 1268 aa10.83□□□□□ -0.68
GPN1-202ENST00000407583 RPS8P62241 208 aaKnown RBP10.83□□□□□ -0.68
GPN1-202ENST00000407583 SF3B3Q15393 1217 aaKnown RBP10.83□□□□□ -0.68
GPN1-202ENST00000407583 LRRC26Q2I0M4 334 aa10.83□□□□□ -0.68
GPN1-202ENST00000407583 C9orf50Q5SZB4 431 aa10.83□□□□□ -0.68
GPN1-202ENST00000407583 PXYLP1Q8TE99 480 aa10.83□□□□□ -0.68
GPN1-202ENST00000407583 LBHD1Q9BQE6 289 aaPredicted RBP10.83□□□□□ -0.68
GPN1-202ENST00000407583 SMC4Q9NTJ3 1288 aa10.83□□□□□ -0.68
GPN1-202ENST00000407583 TRAK2O60296 914 aa10.82□□□□□ -0.68
GPN1-202ENST00000407583 STRIP1Q5VSL9 837 aa10.82□□□□□ -0.68
GPN1-202ENST00000407583 POTEEQ6S8J3 1075 aa10.82□□□□□ -0.68
GPN1-202ENST00000407583 CLEC17AQ6ZS10 378 aa10.82□□□□□ -0.68
GPN1-202ENST00000407583 CDAN1Q8IWY9 1227 aa10.82□□□□□ -0.68
GPN1-202ENST00000407583 THUMPD2Q9BTF0 503 aaKnown RBP10.82□□□□□ -0.68
GPN1-202ENST00000407583 VEZTQ9HBM0 779 aa10.82□□□□□ -0.68
GPN1-202ENST00000407583 MIS18AQ9NYP9 233 aa10.82□□□□□ -0.68
GPN1-202ENST00000407583 CFAP54Q96N23 3096 aa10.82□□□□□ -0.68
GPN1-202ENST00000407583 SPDYE5A6NIY4 337 aa10.81□□□□□ -0.68
GPN1-202ENST00000407583 IRF6O14896 467 aa10.81□□□□□ -0.68
GPN1-202ENST00000407583 U2AF1L5P0DN76 240 aaPredicted RBP10.81□□□□□ -0.68
GPN1-202ENST00000407583 RLBP1P12271 317 aa10.81□□□□□ -0.68
GPN1-202ENST00000407583 DDIT3P35638 169 aa10.81□□□□□ -0.68
GPN1-202ENST00000407583 U2AF1Q01081 240 aaKnown RBP eCLIP10.81□□□□□ -0.68
GPN1-202ENST00000407583 NUCB1Q02818 461 aa10.81□□□□□ -0.68
GPN1-202ENST00000407583 RASA3Q14644 834 aa10.81□□□□□ -0.68
GPN1-202ENST00000407583 DLGAP5Q15398 846 aa10.81□□□□□ -0.68
GPN1-202ENST00000407583 LRP10Q7Z4F1 713 aa10.81□□□□□ -0.68
GPN1-202ENST00000407583 ZBTB38Q8NAP3 1195 aaPredicted RBP10.81□□□□□ -0.68
GPN1-202ENST00000407583 TAOK2Q9UL54 1235 aa10.81□□□□□ -0.68
GPN1-202ENST00000407583 BCRP11274 1271 aa10.8□□□□□ -0.68
GPN1-202ENST00000407583 MMP14P50281 582 aa10.8□□□□□ -0.68
GPN1-202ENST00000407583 MAP3K9P80192 1104 aa10.8□□□□□ -0.68
GPN1-202ENST00000407583 NHLH1Q02575 133 aa10.8□□□□□ -0.68
GPN1-202ENST00000407583 SNAPC2Q13487 334 aa10.8□□□□□ -0.68
GPN1-202ENST00000407583 IRF5Q13568 498 aa10.8□□□□□ -0.68
GPN1-202ENST00000407583 DCTN1Q14203 1278 aa10.8□□□□□ -0.68
GPN1-202ENST00000407583 MTMR14Q8NCE2 650 aa10.8□□□□□ -0.68
GPN1-202ENST00000407583 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.8□□□□□ -0.68
GPN1-202ENST00000407583 ANP32BQ92688 251 aaKnown RBP10.8□□□□□ -0.68
GPN1-202ENST00000407583 PHACTR3Q96KR7 559 aa10.8□□□□□ -0.68
GPN1-202ENST00000407583 SEC31BQ9NQW1 1179 aa10.8□□□□□ -0.68
GPN1-202ENST00000407583 ZBTB40Q9NUA8 1239 aa10.8□□□□□ -0.68
GPN1-202ENST00000407583 CSADQ9Y600 493 aa10.8□□□□□ -0.68
GPN1-202ENST00000407583 REV3LO60673 3130 aa10.8□□□□□ -0.68
GPN1-202ENST00000407583 ZFHX4Q86UP3 3567 aa10.79□□□□□ -0.68
GPN1-202ENST00000407583 PDHXO00330 501 aa10.79□□□□□ -0.68
GPN1-202ENST00000407583 RRP9O43818 475 aaKnown RBP10.79□□□□□ -0.68
GPN1-202ENST00000407583 GPR37L1O60883 481 aa10.79□□□□□ -0.68
GPN1-202ENST00000407583 COL6A1P12109 1028 aa10.79□□□□□ -0.68
GPN1-202ENST00000407583 XRCC6P12956 609 aaKnown RBP eCLIP10.79□□□□□ -0.68
GPN1-202ENST00000407583 TRIM27P14373 513 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms