RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 NTSR2O95665 410 aa11.87□□□□□ -0.51
TPM3-209ENST00000368527 CMA1P23946 247 aa11.87□□□□□ -0.51
TPM3-209ENST00000368527 ZNF75DP51815 510 aa11.87□□□□□ -0.51
TPM3-209ENST00000368527 HAND2P61296 217 aa11.87□□□□□ -0.51
TPM3-209ENST00000368527 RBM6P78332 1123 aaKnown RBP11.87□□□□□ -0.51
TPM3-209ENST00000368527 KIF23Q02241 960 aaPredicted RBP11.87□□□□□ -0.51
TPM3-209ENST00000368527 UBE4AQ14139 1066 aa11.87□□□□□ -0.51
TPM3-209ENST00000368527 SAFBQ15424 915 aaKnown RBP eCLIP11.87□□□□□ -0.51
TPM3-209ENST00000368527 CAMK4Q16566 473 aa11.87□□□□□ -0.51
TPM3-209ENST00000368527 AKNAD1Q5T1N1 836 aa11.87□□□□□ -0.51
TPM3-209ENST00000368527 SUSD4Q5VX71 490 aa11.87□□□□□ -0.51
TPM3-209ENST00000368527 APOA5Q6Q788 366 aa11.87□□□□□ -0.51
TPM3-209ENST00000368527 MFSD6Q6ZSS7 791 aa11.87□□□□□ -0.51
TPM3-209ENST00000368527 CKAP2LQ8IYA6 745 aa11.87□□□□□ -0.51
TPM3-209ENST00000368527 TRIM22Q8IYM9 498 aa11.87□□□□□ -0.51
TPM3-209ENST00000368527 IFNL3Q8IZI9 196 aa11.87□□□□□ -0.51
TPM3-209ENST00000368527 STAG1Q8WVM7 1258 aa11.87□□□□□ -0.51
TPM3-209ENST00000368527 HOOK1Q9UJC3 728 aaKnown RBP11.87□□□□□ -0.51
TPM3-209ENST00000368527 MORC2Q9Y6X9 1032 aaPredicted RBP11.87□□□□□ -0.51
TPM3-209ENST00000368527 DCAF8L1A6NGE4 600 aa11.86□□□□□ -0.51
TPM3-209ENST00000368527 IARSP41252 1262 aaKnown RBP11.86□□□□□ -0.51
TPM3-209ENST00000368527 PLCB2Q00722 1185 aa11.86□□□□□ -0.51
TPM3-209ENST00000368527 SNW1Q13573 536 aaKnown RBP11.86□□□□□ -0.51
TPM3-209ENST00000368527 GNL2Q13823 731 aaKnown RBP11.86□□□□□ -0.51
TPM3-209ENST00000368527 SF3B3Q15393 1217 aaKnown RBP11.86□□□□□ -0.51
TPM3-209ENST00000368527 TMEM67Q5HYA8 995 aa11.86□□□□□ -0.51
TPM3-209ENST00000368527 ANO1Q5XXA6 986 aa11.86□□□□□ -0.51
TPM3-209ENST00000368527 NFXL1Q6ZNB6 911 aa11.86□□□□□ -0.51
TPM3-209ENST00000368527 FMR1NBQ8N0W7 255 aaPredicted RBP11.86□□□□□ -0.51
TPM3-209ENST00000368527 SDF4Q9BRK5 362 aa11.86□□□□□ -0.51
TPM3-209ENST00000368527 ALG1Q9BT22 464 aa11.86□□□□□ -0.51
TPM3-209ENST00000368527 TRIM5Q9C035 493 aa11.86□□□□□ -0.51
TPM3-209ENST00000368527 NYXQ9GZU5 481 aa11.86□□□□□ -0.51
TPM3-209ENST00000368527 ANAPC4Q9UJX5 808 aa11.86□□□□□ -0.51
TPM3-209ENST00000368527 NIP7Q9Y221 180 aaKnown RBP eCLIP11.86□□□□□ -0.51
TPM3-209ENST00000368527 R3HCC1Q9Y3T6 440 aaKnown RBP11.86□□□□□ -0.51
TPM3-209ENST00000368527 SLC12A7Q9Y666 1083 aa11.86□□□□□ -0.51
TPM3-209ENST00000368527 ZNF804BA4D1E1 1349 aa11.86□□□□□ -0.51
TPM3-209ENST00000368527 CNTNAP4Q9C0A0 1308 aa11.86□□□□□ -0.51
TPM3-209ENST00000368527 FAM237AA0A1B0GTK4 181 aa11.85□□□□□ -0.51
TPM3-209ENST00000368527 GOLGA8AA7E2F4 631 aa11.85□□□□□ -0.51
TPM3-209ENST00000368527 SMTNL1A8MU46 457 aa11.85□□□□□ -0.51
TPM3-209ENST00000368527 IFNAR1P17181 557 aa11.85□□□□□ -0.51
TPM3-209ENST00000368527 U2AF2P26368 475 aaKnown RBP eCLIP11.85□□□□□ -0.518e-15■■□□□ 13.6
TPM3-209ENST00000368527 SSRP1Q08945 709 aaKnown RBP11.85□□□□□ -0.51
TPM3-209ENST00000368527 RASGRF1Q13972 1273 aa11.85□□□□□ -0.51
TPM3-209ENST00000368527 SLC39A14Q15043 492 aa11.85□□□□□ -0.51
TPM3-209ENST00000368527 SLFNL1Q499Z3 407 aa11.85□□□□□ -0.51
TPM3-209ENST00000368527 CAVIN4Q5BKX8 364 aa11.85□□□□□ -0.51
TPM3-209ENST00000368527 SLC10A5Q5PT55 438 aa11.85□□□□□ -0.51
TPM3-209ENST00000368527 DNTTIP2Q5QJE6 756 aaKnown RBP11.85□□□□□ -0.51
TPM3-209ENST00000368527 RC3H1Q5TC82 1133 aaKnown RBP11.85□□□□□ -0.51
TPM3-209ENST00000368527 CHST3Q7LGC8 479 aa11.85□□□□□ -0.51
TPM3-209ENST00000368527 TBC1D10CQ8IV04 446 aa11.85□□□□□ -0.51
TPM3-209ENST00000368527 ANKRD18AQ8IVF6 992 aa11.85□□□□□ -0.51
TPM3-209ENST00000368527 DRC7Q8IY82 874 aa11.85□□□□□ -0.51
TPM3-209ENST00000368527 SYNE4Q8N205 404 aa11.85□□□□□ -0.51
TPM3-209ENST00000368527 MAGEB6Q8N7X4 407 aa11.85□□□□□ -0.51
TPM3-209ENST00000368527 KIAA1524Q8TCG1 905 aa11.85□□□□□ -0.51
TPM3-209ENST00000368527 IGDCC4Q8TDY8 1250 aa11.85□□□□□ -0.51
TPM3-209ENST00000368527 CCDC34Q96HJ3 373 aa11.85□□□□□ -0.51
TPM3-209ENST00000368527 ANO8Q9HCE9 1232 aaPredicted RBP11.85□□□□□ -0.51
TPM3-209ENST00000368527 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.85□□□□□ -0.51
TPM3-209ENST00000368527 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.85□□□□□ -0.51
TPM3-209ENST00000368527 DENND2AQ9ULE3 1009 aa11.85□□□□□ -0.51
TPM3-209ENST00000368527 PCDHA7Q9UN72 937 aa11.85□□□□□ -0.51
TPM3-209ENST00000368527 PHLPP1O60346 1717 aa11.84□□□□□ -0.51
TPM3-209ENST00000368527 IFIT3O14879 490 aaKnown RBP11.84□□□□□ -0.51
TPM3-209ENST00000368527 NRDCO43847 1150 aa11.84□□□□□ -0.51
TPM3-209ENST00000368527 CUTAO60888 179 aa11.84□□□□□ -0.51
TPM3-209ENST00000368527 MBD4O95243 580 aa11.84□□□□□ -0.51
TPM3-209ENST00000368527 FMNL1O95466 1100 aaPredicted RBP11.84□□□□□ -0.51
TPM3-209ENST00000368527 XBP1P17861 261 aa11.84□□□□□ -0.51
TPM3-209ENST00000368527 TDO2P48775 406 aa11.84□□□□□ -0.51
TPM3-209ENST00000368527 GSDMDP57764 484 aa11.84□□□□□ -0.51
TPM3-209ENST00000368527 IQCB1Q15051 598 aa11.84□□□□□ -0.51
TPM3-209ENST00000368527 TPRNQ4KMQ1 711 aa11.84□□□□□ -0.51
TPM3-209ENST00000368527 PI16Q6UXB8 463 aa11.84□□□□□ -0.51
TPM3-209ENST00000368527 LUZP1Q86V48 1076 aa11.84□□□□□ -0.51
TPM3-209ENST00000368527 DNAJC25Q9H1X3 360 aa11.84□□□□□ -0.51
TPM3-209ENST00000368527 LY9Q9HBG7 655 aa11.84□□□□□ -0.51
TPM3-209ENST00000368527 BSDC1Q9NW68 430 aaPredicted RBP11.84□□□□□ -0.51
TPM3-209ENST00000368527 LRP2BPQ9P2M1 347 aa11.84□□□□□ -0.51
TPM3-209ENST00000368527 IMPACTQ9P2X3 320 aa11.84□□□□□ -0.51
TPM3-209ENST00000368527 WWC3Q9ULE0 1092 aa11.84□□□□□ -0.51
TPM3-209ENST00000368527 CEP131Q9UPN4 1083 aa11.84□□□□□ -0.51
TPM3-209ENST00000368527 SLIT2O94813 1529 aa11.84□□□□□ -0.51
TPM3-209ENST00000368527 BCORQ6W2J9 1755 aa11.84□□□□□ -0.51
TPM3-209ENST00000368527 C4AP0C0L4 1744 aa11.83□□□□□ -0.52
TPM3-209ENST00000368527 C4BP0C0L5 1744 aa11.83□□□□□ -0.52
TPM3-209ENST00000368527 GSG1L2A8MUP6 293 aa11.83□□□□□ -0.52
TPM3-209ENST00000368527 SOCS7O14512 581 aa11.83□□□□□ -0.52
TPM3-209ENST00000368527 BMP15O95972 392 aa11.83□□□□□ -0.52
TPM3-209ENST00000368527 SLC3A2P08195 630 aaKnown RBP11.83□□□□□ -0.52
TPM3-209ENST00000368527 CALM1P0DP23 149 aa11.83□□□□□ -0.52
TPM3-209ENST00000368527 CALM2P0DP24 149 aa11.83□□□□□ -0.52
TPM3-209ENST00000368527 CALM3P0DP25 149 aa11.83□□□□□ -0.52
TPM3-209ENST00000368527 HMGB2P26583 209 aaKnown RBP11.83□□□□□ -0.52
TPM3-209ENST00000368527 CEBPZQ03701 1054 aaKnown RBP11.83□□□□□ -0.52
TPM3-209ENST00000368527 WTAPQ15007 396 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms