RNA–Protein interactions for RNA: ENST00000272433.6

SFXN5-201, Transcript of sideroflexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN5, Length 4,140 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-201ENST00000272433 TPM3P06753 285 aa12.83□□□□□ -0.36
SFXN5-201ENST00000272433 RABL6Q3YEC7 729 aaPredicted RBP12.83□□□□□ -0.36
SFXN5-201ENST00000272433 TRIM28Q13263 835 aaKnown RBP12.83□□□□□ -0.36
SFXN5-201ENST00000272433 TSR1Q2NL82 804 aaKnown RBP12.83□□□□□ -0.36
SFXN5-201ENST00000272433 CEP57L1Q8IYX8 460 aa12.83□□□□□ -0.36
SFXN5-201ENST00000272433 LARGE2Q8N3Y3 721 aa12.83□□□□□ -0.36
SFXN5-201ENST00000272433 CNNM3Q8NE01 707 aa12.83□□□□□ -0.36
SFXN5-201ENST00000272433 PDE4CQ08493 712 aa12.83□□□□□ -0.36
SFXN5-201ENST00000272433 NFIXQ14938 502 aa12.83□□□□□ -0.36
SFXN5-201ENST00000272433 TXNRD1Q16881 649 aa12.83□□□□□ -0.36
SFXN5-201ENST00000272433 FAM43AQ8N2R8 423 aa12.83□□□□□ -0.36
SFXN5-201ENST00000272433 LCORLQ8N3X6 602 aa12.83□□□□□ -0.36
SFXN5-201ENST00000272433 PODXL2Q9NZ53 605 aa12.83□□□□□ -0.36
SFXN5-201ENST00000272433 MINPP1Q9UNW1 487 aa12.83□□□□□ -0.36
SFXN5-201ENST00000272433 OVOS2A0A0G2JMS6 1433 aa12.83□□□□□ -0.36
SFXN5-201ENST00000272433 CCAR2Q8N163 923 aaKnown RBP12.82□□□□□ -0.36
SFXN5-201ENST00000272433 JDP2Q8WYK2 163 aa12.82□□□□□ -0.36
SFXN5-201ENST00000272433 CABP5Q9NP86 173 aa12.82□□□□□ -0.36
SFXN5-201ENST00000272433 GJA3Q9Y6H8 435 aa12.82□□□□□ -0.36
SFXN5-201ENST00000272433 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.82□□□□□ -0.36
SFXN5-201ENST00000272433 XRCC6P12956 609 aaKnown RBP eCLIP12.82□□□□□ -0.36
SFXN5-201ENST00000272433 POLD1P28340 1107 aa12.82□□□□□ -0.36
SFXN5-201ENST00000272433 ADD2P35612 726 aa12.82□□□□□ -0.36
SFXN5-201ENST00000272433 TFAP4Q01664 338 aa12.82□□□□□ -0.36
SFXN5-201ENST00000272433 PPARAQ07869 468 aa12.82□□□□□ -0.36
SFXN5-201ENST00000272433 NECTIN1Q15223 517 aa12.82□□□□□ -0.36
SFXN5-201ENST00000272433 DBNDD1Q9H9R9 158 aa12.82□□□□□ -0.36
SFXN5-201ENST00000272433 KCNJ14Q9UNX9 436 aa12.82□□□□□ -0.36
SFXN5-201ENST00000272433 TPM1P09493 284 aa12.82□□□□□ -0.36
SFXN5-201ENST00000272433 CCDC173Q0VFZ6 552 aa12.82□□□□□ -0.36
SFXN5-201ENST00000272433 CAMTA2O94983 1202 aa12.81□□□□□ -0.36
SFXN5-201ENST00000272433 PRDX5P30044 214 aa12.81□□□□□ -0.36
SFXN5-201ENST00000272433 A0A1B0GVL5 298 aa12.81□□□□□ -0.36
SFXN5-201ENST00000272433 PPIP5K2O43314 1243 aa12.81□□□□□ -0.36
SFXN5-201ENST00000272433 UBE3CQ15386 1083 aa12.81□□□□□ -0.36
SFXN5-201ENST00000272433 UIMC1Q96RL1 719 aa12.81□□□□□ -0.36
SFXN5-201ENST00000272433 RIPOR2Q9Y4F9 1068 aa12.81□□□□□ -0.36
SFXN5-201ENST00000272433 NCOA3Q9Y6Q9 1424 aa12.81□□□□□ -0.36
SFXN5-201ENST00000272433 PLCG2P16885 1265 aa12.81□□□□□ -0.36
SFXN5-201ENST00000272433 ZNF165P49910 485 aa12.81□□□□□ -0.36
SFXN5-201ENST00000272433 GPCPD1Q9NPB8 672 aa12.81□□□□□ -0.36
SFXN5-201ENST00000272433 CEP131Q9UPN4 1083 aa12.81□□□□□ -0.36
SFXN5-201ENST00000272433 ATF5Q9Y2D1 282 aaPredicted RBP12.81□□□□□ -0.36
SFXN5-201ENST00000272433 COL5A2P05997 1499 aaPredicted RBP12.8□□□□□ -0.36
SFXN5-201ENST00000272433 TTLL12Q14166 644 aaPredicted RBP12.8□□□□□ -0.36
SFXN5-201ENST00000272433 SPECC1Q5M775 1068 aa12.8□□□□□ -0.36
SFXN5-201ENST00000272433 GTF3C6Q969F1 213 aa12.8□□□□□ -0.36
SFXN5-201ENST00000272433 TMEM87BQ96K49 555 aa12.8□□□□□ -0.36
SFXN5-201ENST00000272433 SLC4A9Q96Q91 983 aa12.8□□□□□ -0.36
SFXN5-201ENST00000272433 SPTLC2O15270 562 aa12.8□□□□□ -0.36
SFXN5-201ENST00000272433 BRD1O95696 1058 aa12.8□□□□□ -0.36
SFXN5-201ENST00000272433 ALDH1B1P30837 517 aa12.8□□□□□ -0.36
SFXN5-201ENST00000272433 AFMP43652 599 aa12.8□□□□□ -0.36
SFXN5-201ENST00000272433 RFX5P48382 616 aaPredicted RBP12.8□□□□□ -0.36
SFXN5-201ENST00000272433 ZYXQ15942 572 aaKnown RBP12.8□□□□□ -0.36
SFXN5-201ENST00000272433 INTS5Q6P9B9 1019 aaKnown RBP12.8□□□□□ -0.36
SFXN5-201ENST00000272433 ERCC4Q92889 916 aaPredicted RBP12.8□□□□□ -0.36
SFXN5-201ENST00000272433 KIF2CQ99661 725 aa12.8□□□□□ -0.36
SFXN5-201ENST00000272433 CCDC39Q9UFE4 941 aa12.8□□□□□ -0.36
SFXN5-201ENST00000272433 A0A0U1RQG5 324 aaPredicted RBP12.8□□□□□ -0.36
SFXN5-201ENST00000272433 TPM2P07951 284 aa12.8□□□□□ -0.36
SFXN5-201ENST00000272433 EN1Q05925 392 aaPredicted RBP12.8□□□□□ -0.36
SFXN5-201ENST00000272433 ZNF34Q8IZ26 560 aa12.8□□□□□ -0.36
SFXN5-201ENST00000272433 DDX19AQ9NUU7 478 aaKnown RBP12.8□□□□□ -0.36
SFXN5-201ENST00000272433 BSDC1Q9NW68 430 aaPredicted RBP12.8□□□□□ -0.36
SFXN5-201ENST00000272433 NRXN3Q9Y4C0 1643 aa12.8□□□□□ -0.36
SFXN5-201ENST00000272433 MYO1BO43795 1136 aa12.79□□□□□ -0.36
SFXN5-201ENST00000272433 PDE6BP35913 854 aa12.79□□□□□ -0.36
SFXN5-201ENST00000272433 NAPAP54920 295 aa12.79□□□□□ -0.36
SFXN5-201ENST00000272433 SCRN1Q12765 414 aa12.79□□□□□ -0.36
SFXN5-201ENST00000272433 UBN2Q6ZU65 1347 aa12.79□□□□□ -0.36
SFXN5-201ENST00000272433 RBM6P78332 1123 aaKnown RBP12.79□□□□□ -0.36
SFXN5-201ENST00000272433 WDR78Q5VTH9 848 aa12.79□□□□□ -0.36
SFXN5-201ENST00000272433 BCS1LQ9Y276 419 aa12.79□□□□□ -0.36
SFXN5-201ENST00000272433 SYKP43405 635 aa12.79□□□□□ -0.36
SFXN5-201ENST00000272433 USP40Q9NVE5 1235 aa12.79□□□□□ -0.36
SFXN5-201ENST00000272433 TAF6LQ9Y6J9 622 aa12.79□□□□□ -0.36
SFXN5-201ENST00000272433 XDHP47989 1333 aa12.79□□□□□ -0.36
SFXN5-201ENST00000272433 RGPD8O14715 1765 aaPredicted RBP12.78□□□□□ -0.36
SFXN5-201ENST00000272433 BARGINQ6ZT62 677 aa12.78□□□□□ -0.36
SFXN5-201ENST00000272433 TTC6Q86TZ1 520 aa12.78□□□□□ -0.36
SFXN5-201ENST00000272433 PLIN2Q99541 437 aa12.78□□□□□ -0.36
SFXN5-201ENST00000272433 HDAC9Q9UKV0 1011 aa12.78□□□□□ -0.36
SFXN5-201ENST00000272433 PDIA3P30101 505 aaKnown RBP12.78□□□□□ -0.36
SFXN5-201ENST00000272433 LMBRD1Q9NUN5 540 aa12.78□□□□□ -0.36
SFXN5-201ENST00000272433 R3HCC1Q9Y3T6 440 aaKnown RBP12.78□□□□□ -0.36
SFXN5-201ENST00000272433 ECM2O94769 699 aaPredicted RBP12.78□□□□□ -0.36
SFXN5-201ENST00000272433 ATP2B4P23634 1241 aa12.78□□□□□ -0.36
SFXN5-201ENST00000272433 BTDP43251 543 aa12.78□□□□□ -0.36
SFXN5-201ENST00000272433 CFAP100Q494V2 611 aa12.78□□□□□ -0.36
SFXN5-201ENST00000272433 VPS54Q9P1Q0 977 aa12.78□□□□□ -0.36
SFXN5-201ENST00000272433 MTMR6Q9Y217 621 aa12.78□□□□□ -0.36
SFXN5-201ENST00000272433 SHPRHQ149N8 1683 aa12.78□□□□□ -0.36
SFXN5-201ENST00000272433 MCM7P33993 719 aa12.77□□□□□ -0.36
SFXN5-201ENST00000272433 UBA7P41226 1012 aa12.77□□□□□ -0.36
SFXN5-201ENST00000272433 DIS3L2Q8IYB7 885 aaKnown RBP12.77□□□□□ -0.36
SFXN5-201ENST00000272433 DNAJC25Q9H1X3 360 aa12.77□□□□□ -0.36
SFXN5-201ENST00000272433 GJB4Q9NTQ9 266 aa12.77□□□□□ -0.36
SFXN5-201ENST00000272433 TNKSO95271 1327 aa12.77□□□□□ -0.36
SFXN5-201ENST00000272433 CDHR2Q9BYE9 1310 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms