RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Tubgcp2Q921G8 905 aa18.82■□□□□ 0.6
Trim8-201ENSMUST00000026008 Tnni2P13412 182 aa18.82■□□□□ 0.6
Trim8-201ENSMUST00000026008 Prl3d1P18121 224 aa18.82■□□□□ 0.6
Trim8-201ENSMUST00000026008 Alx1Q8C8B0 326 aa18.82■□□□□ 0.6
Trim8-201ENSMUST00000026008 Ube3bQ9ES34 1070 aa18.82■□□□□ 0.6
Trim8-201ENSMUST00000026008 Mrc1Q61830 1456 aa18.82■□□□□ 0.6
Trim8-201ENSMUST00000026008 Pde8bE9Q4S1 865 aa18.81■□□□□ 0.6
Trim8-201ENSMUST00000026008 GmnnO88513 206 aa18.81■□□□□ 0.6
Trim8-201ENSMUST00000026008 Znf532Q6NXK2 1036 aa18.81■□□□□ 0.6
Trim8-201ENSMUST00000026008 Vps16Q920Q4 839 aa18.81■□□□□ 0.6
Trim8-201ENSMUST00000026008 Riok1Q922Q2 567 aa18.81■□□□□ 0.6
Trim8-201ENSMUST00000026008 Ugt1a6bK9J7B2 531 aa18.81■□□□□ 0.6
Trim8-201ENSMUST00000026008 Sept1P42209 366 aa18.81■□□□□ 0.6
Trim8-201ENSMUST00000026008 Ccdc102aQ3TMW1 549 aa18.81■□□□□ 0.6
Trim8-201ENSMUST00000026008 Ugt1a6Q64435 531 aa18.81■□□□□ 0.6
Trim8-201ENSMUST00000026008 Ugt1a7cQ6ZQM8 531 aa18.81■□□□□ 0.6
Trim8-201ENSMUST00000026008 Vps37dQ810I0 261 aa18.81■□□□□ 0.6
Trim8-201ENSMUST00000026008 Cadps2Q8BYR5 1297 aa18.81■□□□□ 0.6
Trim8-201ENSMUST00000026008 PnnO35691 725 aaKnown RBP18.81■□□□□ 0.6
Trim8-201ENSMUST00000026008 Ift122Q6NWV3 1182 aa18.81■□□□□ 0.6
Trim8-201ENSMUST00000026008 Klhl30Q8C3F7 581 aa18.81■□□□□ 0.6
Trim8-201ENSMUST00000026008 Rbm33Q9CXK9 1231 aaKnown RBP18.81■□□□□ 0.6
Trim8-201ENSMUST00000026008 Zfp142G5E869 1843 aa18.8■□□□□ 0.6
Trim8-201ENSMUST00000026008 Sycp2lA0A0M3U1B0 842 aa18.8■□□□□ 0.6
Trim8-201ENSMUST00000026008 Naaladl2A0A0N4SUJ3 795 aa18.8■□□□□ 0.6
Trim8-201ENSMUST00000026008 Irx2P81066 474 aa18.8■□□□□ 0.6
Trim8-201ENSMUST00000026008 Krt39Q6IFX4 482 aa18.8■□□□□ 0.6
Trim8-201ENSMUST00000026008 Rbm43Q99J64 343 aa18.8■□□□□ 0.6
Trim8-201ENSMUST00000026008 Kcnq5Q9JK45 933 aa18.8■□□□□ 0.6
Trim8-201ENSMUST00000026008 Gm5624F6ZZG8 207 aa18.8■□□□□ 0.6
Trim8-201ENSMUST00000026008 Abl1P00520 1123 aa18.8■□□□□ 0.6
Trim8-201ENSMUST00000026008 Zbtb1Q91VL9 713 aa18.8■□□□□ 0.6
Trim8-201ENSMUST00000026008 Filip1Q9CS72 1211 aa18.8■□□□□ 0.6
Trim8-201ENSMUST00000026008 Creld2Q9CYA0 350 aa18.8■□□□□ 0.6
Trim8-201ENSMUST00000026008 Polr2dQ9D7M8 142 aaKnown RBP18.8■□□□□ 0.6
Trim8-201ENSMUST00000026008 Pik3ap1Q9EQ32 811 aa18.8■□□□□ 0.6
Trim8-201ENSMUST00000026008 Efcc1Q9JJF6 558 aa18.8■□□□□ 0.6
Trim8-201ENSMUST00000026008 Abca3Q8R420 1704 aa18.8■□□□□ 0.6
Trim8-201ENSMUST00000026008 Trim34bJ3QNR8 485 aa18.79■□□□□ 0.6
Trim8-201ENSMUST00000026008 Glis3Q6XP49 780 aa18.79■□□□□ 0.6
Trim8-201ENSMUST00000026008 Clic6Q8BHB9 596 aa18.79■□□□□ 0.6
Trim8-201ENSMUST00000026008 Myo1bP46735 1107 aa18.79■□□□□ 0.6
Trim8-201ENSMUST00000026008 Plcb3P51432 1234 aaKnown RBP18.79■□□□□ 0.6
Trim8-201ENSMUST00000026008 Cep63Q3UPP8 700 aa18.79■□□□□ 0.6
Trim8-201ENSMUST00000026008 Ankrd40Q5SUE8 363 aa18.79■□□□□ 0.6
Trim8-201ENSMUST00000026008 Slfnl1Q8BHW9 410 aa18.79■□□□□ 0.6
Trim8-201ENSMUST00000026008 Serpinb6bO08804 377 aa18.79■□□□□ 0.6
Trim8-201ENSMUST00000026008 Vgll3P85442 326 aa18.79■□□□□ 0.6
Trim8-201ENSMUST00000026008 Uri1Q3TLD5 531 aa18.79■□□□□ 0.6
Trim8-201ENSMUST00000026008 Pex1Q5BL07 1284 aa18.79■□□□□ 0.6
Trim8-201ENSMUST00000026008 Tcp11l1Q8BTG3 509 aa18.79■□□□□ 0.6
Trim8-201ENSMUST00000026008 Mylk2Q8VCR8 613 aa18.79■□□□□ 0.6
Trim8-201ENSMUST00000026008 Mtmr6Q8VE11 617 aa18.79■□□□□ 0.6
Trim8-201ENSMUST00000026008 Etnk1Q9D4V0 363 aa18.79■□□□□ 0.6
Trim8-201ENSMUST00000026008 Gabpb2P81069 414 aa18.78■□□□□ 0.6
Trim8-201ENSMUST00000026008 IqcgQ80W32 419 aa18.78■□□□□ 0.6
Trim8-201ENSMUST00000026008 Vps33aQ9D2N9 598 aa18.78■□□□□ 0.6
Trim8-201ENSMUST00000026008 Tulp1Q9Z273 543 aa18.78■□□□□ 0.6
Trim8-201ENSMUST00000026008 Wnk3Q80XP9 1757 aa18.78■□□□□ 0.6
Trim8-201ENSMUST00000026008 Krt24A1L317 512 aa18.78■□□□□ 0.6
Trim8-201ENSMUST00000026008 Atp8b5A3FIN4 1183 aa18.78■□□□□ 0.6
Trim8-201ENSMUST00000026008 Zbtb7aO88939 569 aaKnown RBP18.78■□□□□ 0.6
Trim8-201ENSMUST00000026008 Eif5P59325 429 aaKnown RBP18.78■□□□□ 0.6
Trim8-201ENSMUST00000026008 Ccdc174Q3U155 467 aa18.78■□□□□ 0.6
Trim8-201ENSMUST00000026008 Arhgef16Q3U5C8 713 aa18.78■□□□□ 0.6
Trim8-201ENSMUST00000026008 Abcf1Q6P542 837 aaKnown RBP18.78■□□□□ 0.6
Trim8-201ENSMUST00000026008 Dcaf5Q80T85 946 aa18.78■□□□□ 0.6
Trim8-201ENSMUST00000026008 Trim11Q99PQ2 467 aa18.78■□□□□ 0.6
Trim8-201ENSMUST00000026008 Tfcp2Q9ERA0 502 aa18.78■□□□□ 0.6
Trim8-201ENSMUST00000026008 Med23Q80YQ2 1367 aa18.78■□□□□ 0.6
Trim8-201ENSMUST00000026008 Dpf2Q61103 391 aaKnown RBP18.78■□□□□ 0.6
Trim8-201ENSMUST00000026008 Usp49Q6P9L4 685 aa18.78■□□□□ 0.6
Trim8-201ENSMUST00000026008 Spag5Q7TME2 1165 aa18.78■□□□□ 0.6
Trim8-201ENSMUST00000026008 Luc7l2Q7TNC4 392 aaKnown RBP18.78■□□□□ 0.6
Trim8-201ENSMUST00000026008 Etf1Q8BWY3 437 aaKnown RBP18.78■□□□□ 0.6
Trim8-201ENSMUST00000026008 Ccdc150Q8CDI7 1110 aa18.78■□□□□ 0.6
Trim8-201ENSMUST00000026008 Tmx1Q8VBT0 278 aa18.78■□□□□ 0.6
Trim8-201ENSMUST00000026008 Mroh6V9GX81 722 aa18.78■□□□□ 0.6
Trim8-201ENSMUST00000026008 Tiam2Q6ZPF3 1715 aa18.77■□□□□ 0.6
Trim8-201ENSMUST00000026008 Pard3Q99NH2 1333 aa18.77■□□□□ 0.6
Trim8-201ENSMUST00000026008 Crb1Q8VHS2 1405 aa18.77■□□□□ 0.6
Trim8-201ENSMUST00000026008 Col3a1P08121 1464 aa18.77■□□□□ 0.6
Trim8-201ENSMUST00000026008 Bag1Q60739 355 aa18.77■□□□□ 0.6
Trim8-201ENSMUST00000026008 Pold4Q9CWP8 107 aa18.77■□□□□ 0.6
Trim8-201ENSMUST00000026008 Dctpp1Q9QY93 170 aa18.77■□□□□ 0.6
Trim8-201ENSMUST00000026008 Slc4a4O88343 1079 aa18.77■□□□□ 0.59
Trim8-201ENSMUST00000026008 NefhP19246 1090 aa18.77■□□□□ 0.59
Trim8-201ENSMUST00000026008 Pnpla2Q8BJ56 486 aa18.77■□□□□ 0.59
Trim8-201ENSMUST00000026008 Ccdc39Q9D5Y1 937 aa18.77■□□□□ 0.59
Trim8-201ENSMUST00000026008 Baiap2l1Q9DBJ3 514 aa18.77■□□□□ 0.59
Trim8-201ENSMUST00000026008 Actn3O88990 900 aaKnown RBP18.76■□□□□ 0.59
Trim8-201ENSMUST00000026008 Sh3bp1P55194 680 aa18.76■□□□□ 0.59
Trim8-201ENSMUST00000026008 Drc7Q6V3W6 876 aa18.76■□□□□ 0.59
Trim8-201ENSMUST00000026008 Sirt2Q8VDQ8 389 aa18.76■□□□□ 0.59
Trim8-201ENSMUST00000026008 Hdac6Q9Z2V5 1149 aa18.76■□□□□ 0.59
Trim8-201ENSMUST00000026008 Casz1Q9CWL2 1761 aa18.76■□□□□ 0.59
Trim8-201ENSMUST00000026008 Col22a1E9Q7P1 1613 aa18.76■□□□□ 0.59
Trim8-201ENSMUST00000026008 Mcm6P97311 821 aa18.76■□□□□ 0.59
Trim8-201ENSMUST00000026008 Rtn1Q8K0T0 780 aa18.76■□□□□ 0.59
Trim8-201ENSMUST00000026008 NenfQ9CQ45 171 aa18.76■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms