RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Nlrp9aQ66X03 949 aa20.77■□□□□ 0.91
Trim54-201ENSMUST00000013771 Fam102bQ8BQS4 339 aa20.77■□□□□ 0.91
Trim54-201ENSMUST00000013771 Rfc4Q99J62 364 aa20.77■□□□□ 0.91
Trim54-201ENSMUST00000013771 MvpQ9EQK5 861 aa20.77■□□□□ 0.91
Trim54-201ENSMUST00000013771 XdhQ00519 1335 aa20.76■□□□□ 0.91
Trim54-201ENSMUST00000013771 Cdcp1Q5U462 833 aa20.76■□□□□ 0.91
Trim54-201ENSMUST00000013771 Gba2Q69ZF3 918 aa20.76■□□□□ 0.91
Trim54-201ENSMUST00000013771 RabggtaQ9JHK4 567 aa20.76■□□□□ 0.91
Trim54-201ENSMUST00000013771 Cd2apQ9JLQ0 637 aa20.76■□□□□ 0.91
Trim54-201ENSMUST00000013771 Ccdc88aQ5SNZ0 1873 aa20.75■□□□□ 0.91
Trim54-201ENSMUST00000013771 Gm42715A0A087WP63 3095 aaKnown RBP20.75■□□□□ 0.91
Trim54-201ENSMUST00000013771 Gm43951A0A0N4SUT6 962 aa20.75■□□□□ 0.91
Trim54-201ENSMUST00000013771 Triml2E9PW10 424 aa20.75■□□□□ 0.91
Trim54-201ENSMUST00000013771 Pagr1bF6V0H0 108 aa20.75■□□□□ 0.91
Trim54-201ENSMUST00000013771 Fam155aQ8CCS2 467 aa20.75■□□□□ 0.91
Trim54-201ENSMUST00000013771 Gpr37l1Q99JG2 481 aa20.75■□□□□ 0.91
Trim54-201ENSMUST00000013771 Pagr1aQ99L02 253 aa20.75■□□□□ 0.91
Trim54-201ENSMUST00000013771 Rgs12Q8CGE9 1381 aa20.74■□□□□ 0.91
Trim54-201ENSMUST00000013771 Tbc1d8bA3KGB4 1114 aa20.74■□□□□ 0.91
Trim54-201ENSMUST00000013771 Oog1E9Q5G7 496 aa20.74■□□□□ 0.91
Trim54-201ENSMUST00000013771 Slc27a3O88561 667 aa20.74■□□□□ 0.91
Trim54-201ENSMUST00000013771 Gjb1P28230 283 aa20.74■□□□□ 0.91
Trim54-201ENSMUST00000013771 Ces5aQ6AW46 575 aa20.74■□□□□ 0.91
Trim54-201ENSMUST00000013771 Srgap3Q812A2 1099 aa20.74■□□□□ 0.91
Trim54-201ENSMUST00000013771 Usp33Q8R5K2 909 aa20.74■□□□□ 0.91
Trim54-201ENSMUST00000013771 Taf5lQ91WQ5 589 aa20.74■□□□□ 0.91
Trim54-201ENSMUST00000013771 Col20a1Q923P0 1320 aa20.73■□□□□ 0.91
Trim54-201ENSMUST00000013771 Slc4a1P04919 929 aa20.73■□□□□ 0.91
Trim54-201ENSMUST00000013771 Atp8b2P98199 1209 aa20.73■□□□□ 0.91
Trim54-201ENSMUST00000013771 Abtb2Q7TQI7 1024 aa20.73■□□□□ 0.91
Trim54-201ENSMUST00000013771 Ube3cQ80U95 1083 aa20.73■□□□□ 0.91
Trim54-201ENSMUST00000013771 Aldh1l2Q8K009 923 aa20.73■□□□□ 0.91
Trim54-201ENSMUST00000013771 Ppp1r42Q8R1Z4 357 aa20.73■□□□□ 0.91
Trim54-201ENSMUST00000013771 Atxn7Q8R4I1 867 aa20.73■□□□□ 0.91
Trim54-201ENSMUST00000013771 Mbd3Q9Z2D8 285 aaKnown RBP20.73■□□□□ 0.91
Trim54-201ENSMUST00000013771 Gm15262A0A140LIQ5 728 aa20.72■□□□□ 0.91
Trim54-201ENSMUST00000013771 Dhx16G3X8X0 1044 aaKnown RBP20.72■□□□□ 0.91
Trim54-201ENSMUST00000013771 ArxO35085 564 aa20.72■□□□□ 0.91
Trim54-201ENSMUST00000013771 Cyp2b10P12791 500 aa20.72■□□□□ 0.91
Trim54-201ENSMUST00000013771 Znf692Q3U381 531 aa20.72■□□□□ 0.91
Trim54-201ENSMUST00000013771 Tbc1d9Q3UYK3 1264 aa20.72■□□□□ 0.91
Trim54-201ENSMUST00000013771 Wdr43Q6ZQL4 677 aaKnown RBP20.72■□□□□ 0.91
Trim54-201ENSMUST00000013771 Cfap69Q8BH53 942 aa20.72■□□□□ 0.91
Trim54-201ENSMUST00000013771 Amer2Q8CCJ4 672 aa20.72■□□□□ 0.91
Trim54-201ENSMUST00000013771 Yipf1Q91VU1 306 aa20.72■□□□□ 0.91
Trim54-201ENSMUST00000013771 Riok1Q922Q2 567 aa20.72■□□□□ 0.91
Trim54-201ENSMUST00000013771 Mei1Q9D4I2 1268 aa20.72■□□□□ 0.91
Trim54-201ENSMUST00000013771 Sept14Q9DA97 430 aa20.72■□□□□ 0.91
Trim54-201ENSMUST00000013771 Atrnl1Q6A051 1378 aa20.72■□□□□ 0.91
Trim54-201ENSMUST00000013771 Rfpl4bJ3QPR6 266 aa20.71■□□□□ 0.91
Trim54-201ENSMUST00000013771 Ccnd3P30282 292 aa20.71■□□□□ 0.91
Trim54-201ENSMUST00000013771 Fads2p1Q0VAX3 487 aa20.71■□□□□ 0.91
Trim54-201ENSMUST00000013771 Wdr70Q3TWF6 657 aa20.71■□□□□ 0.91
Trim54-201ENSMUST00000013771 Asap2Q7SIG6 958 aa20.71■□□□□ 0.91
Trim54-201ENSMUST00000013771 4930504O13RikQ8C5Z9 145 aa20.71■□□□□ 0.91
Trim54-201ENSMUST00000013771 Dclk1Q9JLM8 756 aa20.71■□□□□ 0.91
Trim54-201ENSMUST00000013771 Syt5Q9R0N5 386 aa20.71■□□□□ 0.91
Trim54-201ENSMUST00000013771 Myh3P13541 1940 aa20.71■□□□□ 0.91
Trim54-201ENSMUST00000013771 Tbc1d9bQ5SVR0 1263 aa20.7■□□□□ 0.9
Trim54-201ENSMUST00000013771 Sart3Q9JLI8 962 aaKnown RBP20.7■□□□□ 0.9
Trim54-201ENSMUST00000013771 Gm13128L7MU96 475 aa20.7■□□□□ 0.9
Trim54-201ENSMUST00000013771 Prl3d1P18121 224 aa20.7■□□□□ 0.9
Trim54-201ENSMUST00000013771 B230104I21RikQ3USW4 141 aa20.7■□□□□ 0.9
Trim54-201ENSMUST00000013771 Zc3h4Q6ZPZ3 1304 aaKnown RBP20.69■□□□□ 0.9
Trim54-201ENSMUST00000013771 Map10Q8BJS7 891 aa20.69■□□□□ 0.9
Trim54-201ENSMUST00000013771 PaoxQ8C0L6 504 aa20.69■□□□□ 0.9
Trim54-201ENSMUST00000013771 CsadQ9DBE0 493 aa20.69■□□□□ 0.9
Trim54-201ENSMUST00000013771 Epb41l3Q9WV92 929 aa20.69■□□□□ 0.9
Trim54-201ENSMUST00000013771 Mroh6V9GX81 722 aa20.69■□□□□ 0.9
Trim54-201ENSMUST00000013771 Eps15P42567 897 aa20.68■□□□□ 0.9
Trim54-201ENSMUST00000013771 Eif5P59325 429 aaKnown RBP20.68■□□□□ 0.9
Trim54-201ENSMUST00000013771 Stxbp2Q64324 593 aa20.68■□□□□ 0.9
Trim54-201ENSMUST00000013771 Phf20l1Q8CCJ9 1013 aa20.68■□□□□ 0.9
Trim54-201ENSMUST00000013771 Mctp2Q5RJH2 878 aa20.67■□□□□ 0.9
Trim54-201ENSMUST00000013771 Champ1Q8K327 802 aaKnown RBP20.67■□□□□ 0.9
Trim54-201ENSMUST00000013771 Xrcc4Q924T3 326 aa20.67■□□□□ 0.9
Trim54-201ENSMUST00000013771 Palm3A2TJV2 734 aa20.66■□□□□ 0.9
Trim54-201ENSMUST00000013771 NeflP08551 543 aa20.66■□□□□ 0.9
Trim54-201ENSMUST00000013771 Arl14Q3SXC5 192 aa20.66■□□□□ 0.9
Trim54-201ENSMUST00000013771 Lrch3Q8BVU0 778 aa20.66■□□□□ 0.9
Trim54-201ENSMUST00000013771 GrapQ9CX99 217 aa20.66■□□□□ 0.9
Trim54-201ENSMUST00000013771 Rbm6S4R1W5 1118 aaKnown RBP20.66■□□□□ 0.9
Trim54-201ENSMUST00000013771 Abcc4E9Q236 1325 aa20.65■□□□□ 0.9
Trim54-201ENSMUST00000013771 Plxnb2B2RXS4 1842 aa20.65■□□□□ 0.9
Trim54-201ENSMUST00000013771 Myh6Q02566 1938 aaKnown RBP20.65■□□□□ 0.9
Trim54-201ENSMUST00000013771 1700003F12RikA2AKE5 210 aa20.65■□□□□ 0.9
Trim54-201ENSMUST00000013771 Gm44503E9PYU5 387 aa20.65■□□□□ 0.9
Trim54-201ENSMUST00000013771 Zbtb7aO88939 569 aaKnown RBP20.65■□□□□ 0.9
Trim54-201ENSMUST00000013771 Tnni2P13412 182 aa20.65■□□□□ 0.9
Trim54-201ENSMUST00000013771 Pdlim7Q3TJD7 457 aa20.65■□□□□ 0.9
Trim54-201ENSMUST00000013771 Senp6Q6P7W0 1132 aa20.65■□□□□ 0.9
Trim54-201ENSMUST00000013771 Slc9c1Q6UJY2 1175 aa20.65■□□□□ 0.9
Trim54-201ENSMUST00000013771 Fam160b2Q80YR2 744 aa20.65■□□□□ 0.9
Trim54-201ENSMUST00000013771 Rnf208Q8K0W3 265 aa20.65■□□□□ 0.9
Trim54-201ENSMUST00000013771 Dnaaf4Q8R368 420 aa20.65■□□□□ 0.9
Trim54-201ENSMUST00000013771 Snapc2Q91XA5 359 aa20.65■□□□□ 0.9
Trim54-201ENSMUST00000013771 Zbed3Q9D0L1 228 aa20.65■□□□□ 0.9
Trim54-201ENSMUST00000013771 Zgrf1Q0VGT4 1863 aa20.65■□□□□ 0.9
Trim54-201ENSMUST00000013771 Gm38655A0A286YDK6 273 aa20.64■□□□□ 0.89
Trim54-201ENSMUST00000013771 Gm8882E9Q7E4 283 aa20.64■□□□□ 0.89
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms