Protein–RNA interactions for Protein: J3QPR6

Rfpl4b, MCG1377, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfpl4bJ3QPR6 Gm25239-201ENSMUST00000174915 86 ntBASIC45.55■■■■■ 4.88
Rfpl4bJ3QPR6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42.29■■■■■ 4.36
Rfpl4bJ3QPR6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC41.67■■■■■ 4.26
Rfpl4bJ3QPR6 Gm24109-201ENSMUST00000175489 103 ntBASIC39.63■■■■□ 3.93
Rfpl4bJ3QPR6 Gm15042-201ENSMUST00000120212 883 ntBASIC39.45■■■■□ 3.91
Rfpl4bJ3QPR6 Gm15045-201ENSMUST00000117359 883 ntBASIC38.49■■■■□ 3.75
Rfpl4bJ3QPR6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC38.48■■■■□ 3.75
Rfpl4bJ3QPR6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC38.44■■■■□ 3.74
Rfpl4bJ3QPR6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC38.41■■■■□ 3.74
Rfpl4bJ3QPR6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
Rfpl4bJ3QPR6 Gm23366-201ENSMUST00000175022 89 ntBASIC38.01■■■■□ 3.68
Rfpl4bJ3QPR6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
Rfpl4bJ3QPR6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37.11■■■■□ 3.53
Rfpl4bJ3QPR6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
Rfpl4bJ3QPR6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
Rfpl4bJ3QPR6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.77■■■■□ 3.48
Rfpl4bJ3QPR6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36.76■■■■□ 3.48
Rfpl4bJ3QPR6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36.76■■■■□ 3.48
Rfpl4bJ3QPR6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
Rfpl4bJ3QPR6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36.52■■■■□ 3.44
Rfpl4bJ3QPR6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
Rfpl4bJ3QPR6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
Rfpl4bJ3QPR6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
Rfpl4bJ3QPR6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36.11■■■■□ 3.37
Rfpl4bJ3QPR6 Gm25238-201ENSMUST00000174914 89 ntBASIC36.06■■■■□ 3.36
Rfpl4bJ3QPR6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35.92■■■■□ 3.34
Rfpl4bJ3QPR6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
Rfpl4bJ3QPR6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.61■■■■□ 3.29
Rfpl4bJ3QPR6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
Rfpl4bJ3QPR6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
Rfpl4bJ3QPR6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC35.36■■■■□ 3.25
Rfpl4bJ3QPR6 Psd-208ENSMUST00000224556 2034 ntBASIC35.3■■■■□ 3.24
Rfpl4bJ3QPR6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35.29■■■■□ 3.24
Rfpl4bJ3QPR6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35.23■■■■□ 3.23
Rfpl4bJ3QPR6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
Rfpl4bJ3QPR6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35.03■■■■□ 3.2
Rfpl4bJ3QPR6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.99■■■■□ 3.19
Rfpl4bJ3QPR6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34.95■■■■□ 3.19
Rfpl4bJ3QPR6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC34.89■■■■□ 3.18
Rfpl4bJ3QPR6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.82■■■■□ 3.17
Rfpl4bJ3QPR6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
Rfpl4bJ3QPR6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
Rfpl4bJ3QPR6 Gm25262-201ENSMUST00000174934 133 ntBASIC34.76■■■■□ 3.16
Rfpl4bJ3QPR6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC34.58■■■■□ 3.13
Rfpl4bJ3QPR6 Gm27325-201ENSMUST00000175467 74 ntBASIC34.5■■■■□ 3.11
Rfpl4bJ3QPR6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.39■■■■□ 3.1
Rfpl4bJ3QPR6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
Rfpl4bJ3QPR6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34.25■■■■□ 3.07
Rfpl4bJ3QPR6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34.19■■■■□ 3.06
Rfpl4bJ3QPR6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
Rfpl4bJ3QPR6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34.14■■■■□ 3.06
Rfpl4bJ3QPR6 Rab21-202ENSMUST00000218831 843 ntBASIC34.13■■■■□ 3.05
Rfpl4bJ3QPR6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
Rfpl4bJ3QPR6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34.08■■■■□ 3.05
Rfpl4bJ3QPR6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34.04■■■■□ 3.04
Rfpl4bJ3QPR6 Gm26115-201ENSMUST00000175605 87 ntBASIC34.04■■■■□ 3.04
Rfpl4bJ3QPR6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
Rfpl4bJ3QPR6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.02
Rfpl4bJ3QPR6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC33.91■■■■□ 3.02
Rfpl4bJ3QPR6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33.87■■■■□ 3.01
Rfpl4bJ3QPR6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
Rfpl4bJ3QPR6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33.82■■■■□ 3
Rfpl4bJ3QPR6 Gm8109-201ENSMUST00000194076 746 ntBASIC33.79■■■■□ 3
Rfpl4bJ3QPR6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
Rfpl4bJ3QPR6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.76■■■■□ 3
Rfpl4bJ3QPR6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC33.74■■■□□ 2.99
Rfpl4bJ3QPR6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.73■■■□□ 2.99
Rfpl4bJ3QPR6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33.66■■■□□ 2.98
Rfpl4bJ3QPR6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33.65■■■□□ 2.98
Rfpl4bJ3QPR6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.55■■■□□ 2.96
Rfpl4bJ3QPR6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Rfpl4bJ3QPR6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33.41■■■□□ 2.94
Rfpl4bJ3QPR6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Rfpl4bJ3QPR6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Rfpl4bJ3QPR6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC33.38■■■□□ 2.93
Rfpl4bJ3QPR6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.35■■■□□ 2.93
Rfpl4bJ3QPR6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33.35■■■□□ 2.93
Rfpl4bJ3QPR6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Rfpl4bJ3QPR6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Rfpl4bJ3QPR6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Rfpl4bJ3QPR6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33.19■■■□□ 2.9
Rfpl4bJ3QPR6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33.19■■■□□ 2.9
Rfpl4bJ3QPR6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Rfpl4bJ3QPR6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
Rfpl4bJ3QPR6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC33.16■■■□□ 2.9
Rfpl4bJ3QPR6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
Rfpl4bJ3QPR6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Rfpl4bJ3QPR6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Rfpl4bJ3QPR6 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.97■■■□□ 2.87
Rfpl4bJ3QPR6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.91■■■□□ 2.86
Rfpl4bJ3QPR6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32.89■■■□□ 2.86
Rfpl4bJ3QPR6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.86■■■□□ 2.85
Rfpl4bJ3QPR6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.85■■■□□ 2.85
Rfpl4bJ3QPR6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Rfpl4bJ3QPR6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
Rfpl4bJ3QPR6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.77■■■□□ 2.84
Rfpl4bJ3QPR6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
Rfpl4bJ3QPR6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.75■■■□□ 2.83
Rfpl4bJ3QPR6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.72■■■□□ 2.83
Rfpl4bJ3QPR6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms