Protein–RNA interactions for Protein: Q91VU1

Yipf1, Protein YIPF1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Yipf1Q91VU1 Gm25239-201ENSMUST00000174915 86 ntBASIC45.86■■■■■ 4.93
Yipf1Q91VU1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42.44■■■■■ 4.38
Yipf1Q91VU1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC41.8■■■■■ 4.28
Yipf1Q91VU1 Gm15042-201ENSMUST00000120212 883 ntBASIC40■■■■□ 3.99
Yipf1Q91VU1 Gm24109-201ENSMUST00000175489 103 ntBASIC39.79■■■■□ 3.96
Yipf1Q91VU1 Gm15045-201ENSMUST00000117359 883 ntBASIC39.13■■■■□ 3.85
Yipf1Q91VU1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC38.96■■■■□ 3.83
Yipf1Q91VU1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
Yipf1Q91VU1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC38.71■■■■□ 3.79
Yipf1Q91VU1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC38.44■■■■□ 3.74
Yipf1Q91VU1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC38.32■■■■□ 3.73
Yipf1Q91VU1 Gm23366-201ENSMUST00000175022 89 ntBASIC38.26■■■■□ 3.72
Yipf1Q91VU1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
Yipf1Q91VU1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37.69■■■■□ 3.62
Yipf1Q91VU1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
Yipf1Q91VU1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37.11■■■■□ 3.53
Yipf1Q91VU1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
Yipf1Q91VU1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36.91■■■■□ 3.5
Yipf1Q91VU1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36.87■■■■□ 3.49
Yipf1Q91VU1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36.82■■■■□ 3.49
Yipf1Q91VU1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC36.82■■■■□ 3.49
Yipf1Q91VU1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36.71■■■■□ 3.47
Yipf1Q91VU1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
Yipf1Q91VU1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.57■■■■□ 3.44
Yipf1Q91VU1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
Yipf1Q91VU1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
Yipf1Q91VU1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC36.34■■■■□ 3.41
Yipf1Q91VU1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC36.32■■■■□ 3.41
Yipf1Q91VU1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
Yipf1Q91VU1 Gm25238-201ENSMUST00000174914 89 ntBASIC36.22■■■■□ 3.39
Yipf1Q91VU1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36.17■■■■□ 3.38
Yipf1Q91VU1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
Yipf1Q91VU1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
Yipf1Q91VU1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC36.09■■■■□ 3.37
Yipf1Q91VU1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35.99■■■■□ 3.35
Yipf1Q91VU1 Psd-208ENSMUST00000224556 2034 ntBASIC35.78■■■■□ 3.32
Yipf1Q91VU1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC35.73■■■■□ 3.31
Yipf1Q91VU1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC35.5■■■■□ 3.27
Yipf1Q91VU1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC35.37■■■■□ 3.25
Yipf1Q91VU1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35.28■■■■□ 3.24
Yipf1Q91VU1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
Yipf1Q91VU1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
Yipf1Q91VU1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC35.05■■■■□ 3.2
Yipf1Q91VU1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35.05■■■■□ 3.2
Yipf1Q91VU1 Gm27325-201ENSMUST00000175467 74 ntBASIC35.04■■■■□ 3.2
Yipf1Q91VU1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35.04■■■■□ 3.2
Yipf1Q91VU1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Yipf1Q91VU1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Yipf1Q91VU1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC34.83■■■■□ 3.17
Yipf1Q91VU1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Yipf1Q91VU1 Gm25262-201ENSMUST00000174934 133 ntBASIC34.7■■■■□ 3.15
Yipf1Q91VU1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC34.7■■■■□ 3.14
Yipf1Q91VU1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC34.52■■■■□ 3.12
Yipf1Q91VU1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Yipf1Q91VU1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC34.5■■■■□ 3.11
Yipf1Q91VU1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC34.48■■■■□ 3.11
Yipf1Q91VU1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Yipf1Q91VU1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Yipf1Q91VU1 Rab21-202ENSMUST00000218831 843 ntBASIC34.45■■■■□ 3.11
Yipf1Q91VU1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34.35■■■■□ 3.09
Yipf1Q91VU1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Yipf1Q91VU1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
Yipf1Q91VU1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Yipf1Q91VU1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34.15■■■■□ 3.06
Yipf1Q91VU1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC34.12■■■■□ 3.05
Yipf1Q91VU1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
Yipf1Q91VU1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34.07■■■■□ 3.05
Yipf1Q91VU1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34.04■■■■□ 3.04
Yipf1Q91VU1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC34.04■■■■□ 3.04
Yipf1Q91VU1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC34.03■■■■□ 3.04
Yipf1Q91VU1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC34.01■■■■□ 3.03
Yipf1Q91VU1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33.99■■■■□ 3.03
Yipf1Q91VU1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
Yipf1Q91VU1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
Yipf1Q91VU1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC33.87■■■■□ 3.01
Yipf1Q91VU1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
Yipf1Q91VU1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC33.86■■■■□ 3.01
Yipf1Q91VU1 Gm26115-201ENSMUST00000175605 87 ntBASIC33.85■■■■□ 3.01
Yipf1Q91VU1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC33.81■■■■□ 3
Yipf1Q91VU1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
Yipf1Q91VU1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
Yipf1Q91VU1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Yipf1Q91VU1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Yipf1Q91VU1 Gm8109-201ENSMUST00000194076 746 ntBASIC33.69■■■□□ 2.98
Yipf1Q91VU1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
Yipf1Q91VU1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC33.68■■■□□ 2.98
Yipf1Q91VU1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33.63■■■□□ 2.97
Yipf1Q91VU1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Yipf1Q91VU1 Gm10524-201ENSMUST00000181931 1893 ntBASIC33.61■■■□□ 2.97
Yipf1Q91VU1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC33.6■■■□□ 2.97
Yipf1Q91VU1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC33.56■■■□□ 2.96
Yipf1Q91VU1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33.56■■■□□ 2.96
Yipf1Q91VU1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33.5■■■□□ 2.95
Yipf1Q91VU1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Yipf1Q91VU1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33.46■■■□□ 2.95
Yipf1Q91VU1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC33.38■■■□□ 2.93
Yipf1Q91VU1 Gm42596-201ENSMUST00000196305 1958 ntBASIC33.38■■■□□ 2.93
Yipf1Q91VU1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC33.36■■■□□ 2.93
Yipf1Q91VU1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC33.34■■■□□ 2.93
Yipf1Q91VU1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms