RNA–Protein interactions for RNA: ENST00000497122.5

SOX2-OT-216, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 578 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-216ENST00000497122 TCEAL2Q9H3H9 227 aaPredicted RBP2.85□□□□□ -1.95
SOX2-OT-216ENST00000497122 NHP2Q9NX24 153 aaKnown RBP2.85□□□□□ -1.95
SOX2-OT-216ENST00000497122 SPANXCQ9NY87 97 aa2.85□□□□□ -1.95
SOX2-OT-216ENST00000497122 RASL12Q9NYN1 266 aa2.85□□□□□ -1.95
SOX2-OT-216ENST00000497122 HS3ST2Q9Y278 367 aa2.85□□□□□ -1.95
SOX2-OT-216ENST00000497122 EML6Q6ZMW3 1958 aa2.85□□□□□ -1.95
SOX2-OT-216ENST00000497122 RIC1Q4ADV7 1423 aa2.85□□□□□ -1.95
SOX2-OT-216ENST00000497122 UBR2Q8IWV8 1755 aa2.84□□□□□ -1.95
SOX2-OT-216ENST00000497122 SDK2Q58EX2 2172 aa2.84□□□□□ -1.95
SOX2-OT-216ENST00000497122 TRAV36DV7A0A075B6V5 113 aa2.84□□□□□ -1.95
SOX2-OT-216ENST00000497122 CLPSP04118 112 aa2.84□□□□□ -1.95
SOX2-OT-216ENST00000497122 P0C880 135 aa2.84□□□□□ -1.95
SOX2-OT-216ENST00000497122 ZNF705BP0CI00 300 aaPredicted RBP2.84□□□□□ -1.95
SOX2-OT-216ENST00000497122 AKR1C3P42330 323 aa2.84□□□□□ -1.95
SOX2-OT-216ENST00000497122 PSPHP78330 225 aa2.84□□□□□ -1.95
SOX2-OT-216ENST00000497122 CCDC58Q4VC31 144 aa2.84□□□□□ -1.95
SOX2-OT-216ENST00000497122 TMEM155Q4W5P6 130 aa2.84□□□□□ -1.95
SOX2-OT-216ENST00000497122 C4orf22Q6V702 233 aa2.84□□□□□ -1.95
SOX2-OT-216ENST00000497122 C3orf56Q8N813 242 aa2.84□□□□□ -1.95
SOX2-OT-216ENST00000497122 LXNQ9BS40 222 aa2.84□□□□□ -1.95
SOX2-OT-216ENST00000497122 OR2H1Q9GZK4 316 aa2.84□□□□□ -1.95
SOX2-OT-216ENST00000497122 ZSWIM8A7E2V4 1837 aa2.84□□□□□ -1.96
SOX2-OT-216ENST00000497122 BCL9O00512 1426 aa2.84□□□□□ -1.96
SOX2-OT-216ENST00000497122 SCAF11Q99590 1463 aaKnown RBP2.84□□□□□ -1.96
SOX2-OT-216ENST00000497122 IGKV3D-11A0A0A0MRZ8 115 aa2.83□□□□□ -1.96
SOX2-OT-216ENST00000497122 A0A0G2JQZ4 141 aa2.83□□□□□ -1.96
SOX2-OT-216ENST00000497122 TMEM189A5PLL7 270 aa2.83□□□□□ -1.96
SOX2-OT-216ENST00000497122 HIST1H2BKO60814 126 aa2.83□□□□□ -1.96
SOX2-OT-216ENST00000497122 HIST1H2BJP06899 126 aa2.83□□□□□ -1.96
SOX2-OT-216ENST00000497122 CTSDP07339 412 aaPredicted RBP2.83□□□□□ -1.96
SOX2-OT-216ENST00000497122 SS18Q15532 418 aa2.83□□□□□ -1.96
SOX2-OT-216ENST00000497122 RNASE10Q5GAN6 216 aaKnown RBP2.83□□□□□ -1.96
SOX2-OT-216ENST00000497122 Q6ZTI0 123 aa2.83□□□□□ -1.96
SOX2-OT-216ENST00000497122 LINC00305Q7Z4B0 112 aa2.83□□□□□ -1.96
SOX2-OT-216ENST00000497122 DEFB128Q7Z7B8 93 aa2.83□□□□□ -1.96
SOX2-OT-216ENST00000497122 OR8I2Q8N0Y5 310 aa2.83□□□□□ -1.96
SOX2-OT-216ENST00000497122 TEX29Q8N6K0 151 aa2.83□□□□□ -1.96
SOX2-OT-216ENST00000497122 TCEAL4Q96EI5 215 aa2.83□□□□□ -1.96
SOX2-OT-216ENST00000497122 TIMM21Q9BVV7 248 aa2.83□□□□□ -1.96
SOX2-OT-216ENST00000497122 NUP210Q8TEM1 1887 aaPredicted RBP2.83□□□□□ -1.96
SOX2-OT-216ENST00000497122 COL1A2P08123 1366 aa2.83□□□□□ -1.96
SOX2-OT-216ENST00000497122 CD109Q6YHK3 1445 aa2.83□□□□□ -1.96
SOX2-OT-216ENST00000497122 CAMSAP2Q08AD1 1489 aa2.83□□□□□ -1.96
SOX2-OT-216ENST00000497122 RIMBP3CA6NJZ7 1639 aa2.82□□□□□ -1.96
SOX2-OT-216ENST00000497122 RIMBP3BA6NNM3 1639 aa2.82□□□□□ -1.96
SOX2-OT-216ENST00000497122 RIMBP3Q9UFD9 1639 aa2.82□□□□□ -1.96
SOX2-OT-216ENST00000497122 MYH10P35580 1976 aa2.82□□□□□ -1.96
SOX2-OT-216ENST00000497122 TRAV1-1A0A0B4J248 108 aa2.82□□□□□ -1.96
SOX2-OT-216ENST00000497122 M0QZK8 103 aa2.82□□□□□ -1.96
SOX2-OT-216ENST00000497122 RER1O15258 196 aa2.82□□□□□ -1.96
SOX2-OT-216ENST00000497122 MT-ND6P03923 174 aa2.82□□□□□ -1.96
SOX2-OT-216ENST00000497122 SDC4P31431 198 aa2.82□□□□□ -1.96
SOX2-OT-216ENST00000497122 RPL35P42766 123 aaKnown RBP2.82□□□□□ -1.96
SOX2-OT-216ENST00000497122 OR5D16Q8NGK9 328 aa2.82□□□□□ -1.96
SOX2-OT-216ENST00000497122 ZNF418Q8TF45 676 aaPredicted RBP2.82□□□□□ -1.96
SOX2-OT-216ENST00000497122 TAS2R4Q9NYW5 299 aa2.82□□□□□ -1.96
SOX2-OT-216ENST00000497122 PRO2289Q9P1D8 64 aa2.82□□□□□ -1.96
SOX2-OT-216ENST00000497122 CEP164Q9UPV0 1460 aa2.82□□□□□ -1.96
SOX2-OT-216ENST00000497122 SLIT2O94813 1529 aa2.82□□□□□ -1.96
SOX2-OT-216ENST00000497122 N4BP2Q86UW6 1770 aaPredicted RBP2.82□□□□□ -1.96
SOX2-OT-216ENST00000497122 MYO5AQ9Y4I1 1855 aaKnown RBP2.82□□□□□ -1.96
SOX2-OT-216ENST00000497122 BORCS7-ASMTA0A0B4J1R7 106 aa2.81□□□□□ -1.96
SOX2-OT-216ENST00000497122 IFNA4P05014 189 aa2.81□□□□□ -1.96
SOX2-OT-216ENST00000497122 DBIP07108 87 aaKnown RBP2.81□□□□□ -1.96
SOX2-OT-216ENST00000497122 FUSP35637 526 aaKnown RBP eCLIP2.81□□□□□ -1.96
SOX2-OT-216ENST00000497122 ESRGQ1W209 222 aa2.81□□□□□ -1.96
SOX2-OT-216ENST00000497122 SMIM21Q3B7S5 101 aa2.81□□□□□ -1.96
SOX2-OT-216ENST00000497122 VMA21Q3ZAQ7 101 aa2.81□□□□□ -1.96
SOX2-OT-216ENST00000497122 LYPD1Q8N2G4 141 aa2.81□□□□□ -1.96
SOX2-OT-216ENST00000497122 AP1S3Q96PC3 154 aa2.81□□□□□ -1.96
SOX2-OT-216ENST00000497122 TSC22D3Q99576 134 aa2.81□□□□□ -1.96
SOX2-OT-216ENST00000497122 SLC50A1Q9BRV3 221 aa2.81□□□□□ -1.96
SOX2-OT-216ENST00000497122 CST9LQ9H4G1 147 aa2.81□□□□□ -1.96
SOX2-OT-216ENST00000497122 HSPB8Q9UJY1 196 aa2.81□□□□□ -1.96
SOX2-OT-216ENST00000497122 ZCCHC11Q5TAX3 1644 aaKnown RBP2.8□□□□□ -1.96
SOX2-OT-216ENST00000497122 KDM5BQ9UGL1 1544 aa2.8□□□□□ -1.96
SOX2-OT-216ENST00000497122 TRGV4A0A0C4DH28 118 aa2.8□□□□□ -1.96
SOX2-OT-216ENST00000497122 A0A1B0GX51 115 aa2.8□□□□□ -1.96
SOX2-OT-216ENST00000497122 IBA57-AS1B1ANH7 110 aa2.8□□□□□ -1.96
SOX2-OT-216ENST00000497122 TNFSF15O95150 251 aa2.8□□□□□ -1.96
SOX2-OT-216ENST00000497122 TAF9Q16594 264 aa2.8□□□□□ -1.96
SOX2-OT-216ENST00000497122 SPANXN5Q5MJ07 72 aa2.8□□□□□ -1.96
SOX2-OT-216ENST00000497122 HCP5Q6MZN7 132 aa2.8□□□□□ -1.96
SOX2-OT-216ENST00000497122 C7orf65Q6ZTY9 151 aa2.8□□□□□ -1.96
SOX2-OT-216ENST00000497122 MPDZO75970 2070 aa2.8□□□□□ -1.96
SOX2-OT-216ENST00000497122 TRAV5A0A0B4J249 113 aa2.79□□□□□ -1.96
SOX2-OT-216ENST00000497122 IGHV1-58A0A0C4DH39 117 aa2.79□□□□□ -1.96
SOX2-OT-216ENST00000497122 ZNF705FA8MVS1 300 aaPredicted RBP2.79□□□□□ -1.96
SOX2-OT-216ENST00000497122 A8MWV9 139 aa2.79□□□□□ -1.96
SOX2-OT-216ENST00000497122 C9JAW5 83 aa2.79□□□□□ -1.96
SOX2-OT-216ENST00000497122 IGKV4-1P06312 121 aa2.79□□□□□ -1.96
SOX2-OT-216ENST00000497122 COX4I1P13073 169 aa2.79□□□□□ -1.96
SOX2-OT-216ENST00000497122 ZNF181Q2M3W8 571 aa2.79□□□□□ -1.96
SOX2-OT-216ENST00000497122 LINC00301Q8NCQ3 95 aa2.79□□□□□ -1.96
SOX2-OT-216ENST00000497122 OR2T35Q8NGX2 323 aa2.79□□□□□ -1.96
SOX2-OT-216ENST00000497122 CHCHD1Q96BP2 118 aaKnown RBP2.79□□□□□ -1.96
SOX2-OT-216ENST00000497122 PFDN5Q99471 154 aa2.79□□□□□ -1.96
SOX2-OT-216ENST00000497122 HIGD1AQ9Y241 93 aa2.79□□□□□ -1.96
SOX2-OT-216ENST00000497122 ARHGEF28Q8N1W1 1705 aaKnown RBP2.79□□□□□ -1.96
SOX2-OT-216ENST00000497122 XIRP1Q702N8 1843 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms