RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 ELOBQ15370 118 aa10.57□□□□□ -0.72
PTPRN2-202ENST00000389416 MBD3L1Q8WWY6 194 aa10.57□□□□□ -0.72
PTPRN2-202ENST00000389416 G0S2P27469 103 aa10.57□□□□□ -0.72
PTPRN2-202ENST00000389416 HTTP42858 3142 aa10.57□□□□□ -0.72
PTPRN2-202ENST00000389416 FOXA3P55318 350 aaPredicted RBP10.57□□□□□ -0.72
PTPRN2-202ENST00000389416 ATRAIDQ6UW56 229 aa10.57□□□□□ -0.72
PTPRN2-202ENST00000389416 C22orf34Q6ZV56 151 aa10.57□□□□□ -0.72
PTPRN2-202ENST00000389416 SLC25A39Q9BZJ4 359 aaPredicted RBP10.57□□□□□ -0.72
PTPRN2-202ENST00000389416 LINC00311Q8N616 119 aa10.57□□□□□ -0.72
PTPRN2-202ENST00000389416 SLC50A1Q9BRV3 221 aa10.57□□□□□ -0.72
PTPRN2-202ENST00000389416 CXorf65A6NEN9 183 aa10.57□□□□□ -0.72
PTPRN2-202ENST00000389416 IGHV4-39P01824 125 aa10.57□□□□□ -0.72
PTPRN2-202ENST00000389416 BTF3P20290 206 aaKnown RBP10.57□□□□□ -0.72
PTPRN2-202ENST00000389416 SRIP30626 198 aa10.57□□□□□ -0.72
PTPRN2-202ENST00000389416 LYPD6Q86Y78 171 aa10.57□□□□□ -0.72
PTPRN2-202ENST00000389416 TRGV9Q99603 122 aa10.57□□□□□ -0.72
PTPRN2-202ENST00000389416 ATG101Q9BSB4 218 aa10.57□□□□□ -0.72
PTPRN2-202ENST00000389416 RNASE7Q9H1E1 156 aaKnown RBP10.57□□□□□ -0.72
PTPRN2-202ENST00000389416 SDF2L1Q9HCN8 221 aa10.57□□□□□ -0.72
PTPRN2-202ENST00000389416 TMEM14BQ9NUH8 114 aa10.57□□□□□ -0.72
PTPRN2-202ENST00000389416 IGHV4-30-2A0A087WSY4 118 aa10.56□□□□□ -0.72
PTPRN2-202ENST00000389416 TAS2R60P59551 318 aa10.56□□□□□ -0.72
PTPRN2-202ENST00000389416 Q6ZSR3 168 aa10.56□□□□□ -0.72
PTPRN2-202ENST00000389416 EXOC3-AS1Q8N2X6 119 aa10.56□□□□□ -0.72
PTPRN2-202ENST00000389416 PRO1933Q9H354 126 aa10.56□□□□□ -0.72
PTPRN2-202ENST00000389416 RNASE4P34096 147 aaKnown RBP10.56□□□□□ -0.72
PTPRN2-202ENST00000389416 RPL23P62829 140 aaKnown RBP10.56□□□□□ -0.72
PTPRN2-202ENST00000389416 PTTG1IPP53801 180 aa10.56□□□□□ -0.72
PTPRN2-202ENST00000389416 SRSF4Q08170 494 aaKnown RBP10.56□□□□□ -0.72
PTPRN2-202ENST00000389416 LCNL1Q6ZST4 164 aa10.56□□□□□ -0.72
PTPRN2-202ENST00000389416 CBY3A6NI87 242 aa10.55□□□□□ -0.72
PTPRN2-202ENST00000389416 SRRM4A7MD48 611 aaKnown RBP10.55□□□□□ -0.72
PTPRN2-202ENST00000389416 C19orf35Q6ZS72 473 aa10.55□□□□□ -0.72
PTPRN2-202ENST00000389416 TCF24Q7RTU0 167 aa10.55□□□□□ -0.72
PTPRN2-202ENST00000389416 KLHL30-AS1Q8NEE0 82 aa10.55□□□□□ -0.72
PTPRN2-202ENST00000389416 TMEM191AQ9H0A3 160 aa10.55□□□□□ -0.72
PTPRN2-202ENST00000389416 CARHSP1Q9Y2V2 147 aaKnown RBP10.55□□□□□ -0.72
PTPRN2-202ENST00000389416 ZNF56Q15929 161 aa10.55□□□□□ -0.72
PTPRN2-202ENST00000389416 SPSB3Q6PJ21 355 aa10.55□□□□□ -0.72
PTPRN2-202ENST00000389416 MYOZ3Q8TDC0 251 aa10.55□□□□□ -0.72
PTPRN2-202ENST00000389416 FMC1Q96HJ9 113 aa10.55□□□□□ -0.72
PTPRN2-202ENST00000389416 MAP1LC3CQ9BXW4 147 aa10.55□□□□□ -0.72
PTPRN2-202ENST00000389416 TNCP24821 2201 aa10.55□□□□□ -0.72
PTPRN2-202ENST00000389416 FBXL19-AS1Q494R0 122 aa10.55□□□□□ -0.72
PTPRN2-202ENST00000389416 ZNF462Q96JM2 2506 aa10.55□□□□□ -0.72
PTPRN2-202ENST00000389416 PRRC2CQ9Y520 2896 aaKnown RBP10.55□□□□□ -0.72
PTPRN2-202ENST00000389416 TRGC1P0CF51 173 aa10.55□□□□□ -0.72
PTPRN2-202ENST00000389416 EMP1P54849 157 aa10.55□□□□□ -0.72
PTPRN2-202ENST00000389416 SIGLEC15Q6ZMC9 328 aa10.55□□□□□ -0.72
PTPRN2-202ENST00000389416 DUX3Q96PT4 197 aa10.55□□□□□ -0.72
PTPRN2-202ENST00000389416 CHD7Q9P2D1 2997 aa10.55□□□□□ -0.72
PTPRN2-202ENST00000389416 PSG8Q9UQ74 426 aa10.55□□□□□ -0.72
PTPRN2-202ENST00000389416 DYSFO75923 2080 aa10.55□□□□□ -0.72
PTPRN2-202ENST00000389416 ZNF688P0C7X2 276 aa10.54□□□□□ -0.72
PTPRN2-202ENST00000389416 PSMG4Q5JS54 123 aa10.54□□□□□ -0.72
PTPRN2-202ENST00000389416 AGMATQ9BSE5 352 aa10.54□□□□□ -0.72
PTPRN2-202ENST00000389416 NDUFA4L2Q9NRX3 87 aa10.54□□□□□ -0.72
PTPRN2-202ENST00000389416 ABCA12Q86UK0 2595 aa10.54□□□□□ -0.72
PTPRN2-202ENST00000389416 OVOL3O00110 214 aa10.54□□□□□ -0.72
PTPRN2-202ENST00000389416 KLF2Q9Y5W3 355 aaPredicted RBP10.54□□□□□ -0.72
PTPRN2-202ENST00000389416 DSCAMO60469 2012 aa10.54□□□□□ -0.72
PTPRN2-202ENST00000389416 NDUFB8O95169 186 aa10.54□□□□□ -0.72
PTPRN2-202ENST00000389416 C21orf62-AS1Q17RA5 79 aa10.54□□□□□ -0.72
PTPRN2-202ENST00000389416 FBLN7Q53RD9 439 aa10.54□□□□□ -0.72
PTPRN2-202ENST00000389416 CIARTQ8N365 385 aaPredicted RBP10.54□□□□□ -0.72
PTPRN2-202ENST00000389416 OCC1Q8TAD7 63 aa10.54□□□□□ -0.72
PTPRN2-202ENST00000389416 LINC01587Q99440 93 aa10.54□□□□□ -0.72
PTPRN2-202ENST00000389416 KLK15Q9H2R5 256 aa10.54□□□□□ -0.72
PTPRN2-202ENST00000389416 TNRC6AQ8NDV7 1962 aaKnown RBP10.54□□□□□ -0.72
PTPRN2-202ENST00000389416 TRBV7-1A0A0A6YYK4 115 aa10.54□□□□□ -0.72
PTPRN2-202ENST00000389416 FAM181BA6NEQ2 426 aa10.54□□□□□ -0.72
PTPRN2-202ENST00000389416 PAX9P55771 341 aa10.54□□□□□ -0.72
PTPRN2-202ENST00000389416 FAM209BQ5JX69 171 aa10.54□□□□□ -0.72
PTPRN2-202ENST00000389416 MKI67P46013 3256 aaKnown RBP10.53□□□□□ -0.72
PTPRN2-202ENST00000389416 SAP30O75446 220 aa10.53□□□□□ -0.72
PTPRN2-202ENST00000389416 ASIPP42127 132 aa10.53□□□□□ -0.72
PTPRN2-202ENST00000389416 HNRNPA3P51991 378 aaKnown RBP10.53□□□□□ -0.72
PTPRN2-202ENST00000389416 HBBP68871 147 aa10.53□□□□□ -0.72
PTPRN2-202ENST00000389416 WT1-ASQ06250 92 aa10.53□□□□□ -0.72
PTPRN2-202ENST00000389416 GUSBP1Q15486 140 aa10.53□□□□□ -0.72
PTPRN2-202ENST00000389416 IGFL4Q6B9Z1 124 aa10.53□□□□□ -0.72
PTPRN2-202ENST00000389416 USMG5Q96IX5 58 aa10.53□□□□□ -0.72
PTPRN2-202ENST00000389416 FABP5P3A8MUU1 101 aa10.53□□□□□ -0.72
PTPRN2-202ENST00000389416 TCTAP57738 103 aa10.53□□□□□ -0.72
PTPRN2-202ENST00000389416 VN1R17PQ8TDU5 208 aa10.53□□□□□ -0.72
PTPRN2-202ENST00000389416 RPP21Q9H633 154 aaKnown RBP10.53□□□□□ -0.72
PTPRN2-202ENST00000389416 IL36BQ9NZH7 164 aa10.53□□□□□ -0.72
PTPRN2-202ENST00000389416 TRBV20OR9-2A0A075B6H5 130 aa10.52□□□□□ -0.72
PTPRN2-202ENST00000389416 A0A1B0GUT8 65 aa10.52□□□□□ -0.72
PTPRN2-202ENST00000389416 PPIFP30405 207 aaKnown RBP10.52□□□□□ -0.72
PTPRN2-202ENST00000389416 TMEM183BQ1AE95 376 aa10.52□□□□□ -0.72
PTPRN2-202ENST00000389416 STHQ8IWL8 128 aa10.52□□□□□ -0.72
PTPRN2-202ENST00000389416 EIF4E3Q8N5X7 224 aaKnown RBP10.52□□□□□ -0.72
PTPRN2-202ENST00000389416 HSPB9Q9BQS6 159 aa10.52□□□□□ -0.72
PTPRN2-202ENST00000389416 DEFB113Q30KQ7 82 aa10.52□□□□□ -0.73
PTPRN2-202ENST00000389416 IMMP2LQ96T52 175 aa10.52□□□□□ -0.73
PTPRN2-202ENST00000389416 HSPB8Q9UJY1 196 aa10.52□□□□□ -0.73
PTPRN2-202ENST00000389416 LYL1P12980 280 aa10.52□□□□□ -0.73
PTPRN2-202ENST00000389416 SYNJ2BPP57105 145 aa10.52□□□□□ -0.73
PTPRN2-202ENST00000389416 IGKV2-40A0A087WW87 121 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms