RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 GAFA1Q96PS6 74 aa14.34□□□□□ -0.11
APP-202ENST00000348990 SCRT2Q9NQ03 307 aa14.34□□□□□ -0.11
APP-202ENST00000348990 CSN1S1P47710 185 aa14.34□□□□□ -0.11
APP-202ENST00000348990 RHOGP84095 191 aa14.34□□□□□ -0.11
APP-202ENST00000348990 C1orf210Q8IVY1 113 aa14.34□□□□□ -0.11
APP-202ENST00000348990 OR4C13Q8NGP0 309 aa14.34□□□□□ -0.11
APP-202ENST00000348990 FAM231BA6NCW3 169 aa14.33□□□□□ -0.11
APP-202ENST00000348990 KLK10O43240 276 aa14.33□□□□□ -0.11
APP-202ENST00000348990 ZNF71Q9NQZ8 489 aaPredicted RBP14.33□□□□□ -0.11
APP-202ENST00000348990 TPSG1Q9NRR2 321 aa14.33□□□□□ -0.11
APP-202ENST00000348990 PRR33A8MZF0 331 aa14.33□□□□□ -0.12
APP-202ENST00000348990 TMEM97Q5BJF2 176 aa14.33□□□□□ -0.12
APP-202ENST00000348990 C1orf162Q8NEQ5 155 aaPredicted RBP14.33□□□□□ -0.12
APP-202ENST00000348990 VSTM2AQ8TAG5 236 aa14.33□□□□□ -0.12
APP-202ENST00000348990 TMEM265A0A087WTH1 108 aa14.33□□□□□ -0.12
APP-202ENST00000348990 TM4SF20Q53R12 229 aa14.33□□□□□ -0.12
APP-202ENST00000348990 FDCSPQ8NFU4 85 aa14.33□□□□□ -0.12
APP-202ENST00000348990 FMC1Q96HJ9 113 aa14.33□□□□□ -0.12
APP-202ENST00000348990 IGKV1D-37A0A075B6S9 117 aa14.32□□□□□ -0.12
APP-202ENST00000348990 IGLV1-44P01699 117 aa14.32□□□□□ -0.12
APP-202ENST00000348990 RBP4P02753 201 aa14.32□□□□□ -0.12
APP-202ENST00000348990 BOD1L1Q8NFC6 3051 aa14.32□□□□□ -0.12
APP-202ENST00000348990 ARMS2P0C7Q2 107 aa14.32□□□□□ -0.12
APP-202ENST00000348990 FOXE3Q13461 319 aa14.32□□□□□ -0.12
APP-202ENST00000348990 VMA21Q3ZAQ7 101 aa14.32□□□□□ -0.12
APP-202ENST00000348990 PPBPP02775 128 aa14.31□□□□□ -0.12
APP-202ENST00000348990 SRSF6Q13247 344 aaKnown RBP14.31□□□□□ -0.12
APP-202ENST00000348990 GUSBP1Q15486 140 aa14.31□□□□□ -0.12
APP-202ENST00000348990 RUSC1-AS1Q66K80 236 aa14.31□□□□□ -0.12
APP-202ENST00000348990 WFDC3Q8IUB2 231 aa14.31□□□□□ -0.12
APP-202ENST00000348990 UBALD2Q8IYN6 164 aa14.31□□□□□ -0.12
APP-202ENST00000348990 SLC25A15Q9Y619 301 aa14.31□□□□□ -0.12
APP-202ENST00000348990 A0A1B0GUT8 65 aa14.31□□□□□ -0.12
APP-202ENST00000348990 Q71RC1 249 aaPredicted RBP14.31□□□□□ -0.12
APP-202ENST00000348990 CRXO43186 299 aaPredicted RBP14.31□□□□□ -0.12
APP-202ENST00000348990 GLRXP35754 106 aa14.31□□□□□ -0.12
APP-202ENST00000348990 CFHR2P36980 270 aa14.31□□□□□ -0.12
APP-202ENST00000348990 NMUP48645 174 aa14.31□□□□□ -0.12
APP-202ENST00000348990 GTF2H5Q6ZYL4 71 aa14.31□□□□□ -0.12
APP-202ENST00000348990 MS4A6AQ9H2W1 248 aa14.31□□□□□ -0.12
APP-202ENST00000348990 C7orf69Q9H7B7 122 aa14.31□□□□□ -0.12
APP-202ENST00000348990 THYN1Q9P016 225 aa14.31□□□□□ -0.12
APP-202ENST00000348990 F11RQ9Y624 299 aaKnown RBP14.31□□□□□ -0.12
APP-202ENST00000348990 A0A1W2PPI3 338 aa14.3□□□□□ -0.12
APP-202ENST00000348990 C22orf46C9J442 243 aa14.3□□□□□ -0.12
APP-202ENST00000348990 NCR2O95944 276 aa14.3□□□□□ -0.12
APP-202ENST00000348990 OR10AG1Q8NH19 301 aa14.3□□□□□ -0.12
APP-202ENST00000348990 SOX21Q9Y651 276 aaPredicted RBP14.3□□□□□ -0.12
APP-202ENST00000348990 CACNA1HO95180 2353 aa14.3□□□□□ -0.12
APP-202ENST00000348990 LHBP01229 141 aa14.3□□□□□ -0.12
APP-202ENST00000348990 RIGQ13278 110 aa14.3□□□□□ -0.12
APP-202ENST00000348990 CCL17Q92583 94 aa14.3□□□□□ -0.12
APP-202ENST00000348990 SPTBN2O15020 2390 aa14.3□□□□□ -0.12
APP-202ENST00000348990 IGHV1-46P01743 117 aa14.3□□□□□ -0.12
APP-202ENST00000348990 WFDC8Q8IUA0 241 aa14.29□□□□□ -0.12
APP-202ENST00000348990 NDFIP1Q9BT67 221 aa14.29□□□□□ -0.12
APP-202ENST00000348990 PLSCR4Q9NRQ2 329 aa14.29□□□□□ -0.12
APP-202ENST00000348990 HIGD1AQ9Y241 93 aa14.29□□□□□ -0.12
APP-202ENST00000348990 DCHS1Q96JQ0 3298 aa14.28□□□□□ -0.12
APP-202ENST00000348990 COX8AP10176 69 aa14.28□□□□□ -0.12
APP-202ENST00000348990 TNFRSF1AP19438 455 aa14.28□□□□□ -0.12
APP-202ENST00000348990 ZNF788Q6ZQV5 615 aa14.28□□□□□ -0.12
APP-202ENST00000348990 MLST8Q9BVC4 326 aa14.28□□□□□ -0.12
APP-202ENST00000348990 CSTL1Q9H114 145 aa14.28□□□□□ -0.12
APP-202ENST00000348990 A6NDN8 102 aa14.28□□□□□ -0.12
APP-202ENST00000348990 IFI27P40305 119 aaPredicted RBP14.28□□□□□ -0.12
APP-202ENST00000348990 FAM71F2Q6NXP2 309 aa14.28□□□□□ -0.12
APP-202ENST00000348990 TMEM167AQ8TBQ9 72 aa14.28□□□□□ -0.12
APP-202ENST00000348990 NEU4Q8WWR8 484 aaPredicted RBP14.28□□□□□ -0.12
APP-202ENST00000348990 RITA1Q96K30 269 aa14.28□□□□□ -0.12
APP-202ENST00000348990 FBLL1A6NHQ2 334 aaKnown RBP14.28□□□□□ -0.12
APP-202ENST00000348990 LTAP01374 205 aa14.28□□□□□ -0.12
APP-202ENST00000348990 RPL24P83731 157 aaKnown RBP14.28□□□□□ -0.12
APP-202ENST00000348990 PLGLAQ15195 96 aa14.28□□□□□ -0.12
APP-202ENST00000348990 FAM222BQ8WU58 562 aa14.28□□□□□ -0.12
APP-202ENST00000348990 PRSS22Q9GZN4 317 aa14.28□□□□□ -0.12
APP-202ENST00000348990 DLX1P56177 255 aa14.27□□□□□ -0.12
APP-202ENST00000348990 CACNA1BQ00975 2339 aa14.27□□□□□ -0.12
APP-202ENST00000348990 TM4SF5O14894 197 aa14.27□□□□□ -0.13
APP-202ENST00000348990 FAM106CPP0CH98 169 aa14.27□□□□□ -0.13
APP-202ENST00000348990 CACNG7P62955 275 aa14.27□□□□□ -0.13
APP-202ENST00000348990 FAM106AQ4KMX7 169 aa14.27□□□□□ -0.13
APP-202ENST00000348990 PRSS57Q6UWY2 283 aa14.27□□□□□ -0.13
APP-202ENST00000348990 RABAC1Q9UI14 185 aa14.27□□□□□ -0.13
APP-202ENST00000348990 KLF12Q9Y4X4 402 aa14.27□□□□□ -0.13
APP-202ENST00000348990 LINC00312Q9Y6C7 94 aa14.27□□□□□ -0.13
APP-202ENST00000348990 SP9P0CG40 484 aa14.26□□□□□ -0.13
APP-202ENST00000348990 RPL27AP46776 148 aaKnown RBP14.26□□□□□ -0.13
APP-202ENST00000348990 Q86TA4 180 aa14.26□□□□□ -0.13
APP-202ENST00000348990 ZNF747Q9BV97 191 aa14.26□□□□□ -0.13
APP-202ENST00000348990 C19orf71A6NCJ1 209 aa14.26□□□□□ -0.13
APP-202ENST00000348990 MYCNOSP40205 109 aa14.26□□□□□ -0.13
APP-202ENST00000348990 ZNF833PQ6ZTB9 187 aa14.26□□□□□ -0.13
APP-202ENST00000348990 FER1L6-AS1Q8NA97 138 aa14.26□□□□□ -0.13
APP-202ENST00000348990 OR5AN1Q8NGI8 311 aa14.26□□□□□ -0.13
APP-202ENST00000348990 SMIM12Q96EX1 92 aa14.26□□□□□ -0.13
APP-202ENST00000348990 GUCD1Q96NT3 240 aa14.26□□□□□ -0.13
APP-202ENST00000348990 CGB1A6NKQ9 187 aa14.26□□□□□ -0.13
APP-202ENST00000348990 IGLC1P0CG04 106 aa14.25□□□□□ -0.13
APP-202ENST00000348990 CT45A10P0DMU9 189 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms