RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 GTF2H5Q6ZYL4 71 aa11.8□□□□□ -0.52
COL6A2-201ENST00000300527 TMEM178AQ8NBL3 297 aa11.8□□□□□ -0.52
COL6A2-201ENST00000300527 ZNF714Q96N38 554 aa11.8□□□□□ -0.52
COL6A2-201ENST00000300527 PSMB11A5LHX3 300 aa11.8□□□□□ -0.52
COL6A2-201ENST00000300527 IGLC1P0CG04 106 aa11.8□□□□□ -0.52
COL6A2-201ENST00000300527 DLX1P56177 255 aa11.8□□□□□ -0.52
COL6A2-201ENST00000300527 TNFAIP6P98066 277 aaPredicted RBP11.8□□□□□ -0.52
COL6A2-201ENST00000300527 FAM71F2Q6NXP2 309 aa11.8□□□□□ -0.52
COL6A2-201ENST00000300527 JMJD8Q96S16 334 aa11.8□□□□□ -0.52
COL6A2-201ENST00000300527 RABAC1Q9UI14 185 aa11.8□□□□□ -0.52
COL6A2-201ENST00000300527 FNDC10F2Z333 226 aa11.79□□□□□ -0.52
COL6A2-201ENST00000300527 CFHR2P36980 270 aa11.79□□□□□ -0.52
COL6A2-201ENST00000300527 SUB1P53999 127 aaKnown RBP eCLIP11.79□□□□□ -0.52
COL6A2-201ENST00000300527 LOXL1Q08397 574 aaPredicted RBP11.79□□□□□ -0.52
COL6A2-201ENST00000300527 SMIM12Q96EX1 92 aa11.79□□□□□ -0.52
COL6A2-201ENST00000300527 FER1L6-AS2Q96M78 137 aa11.79□□□□□ -0.52
COL6A2-201ENST00000300527 CACNG7P62955 275 aa11.79□□□□□ -0.52
COL6A2-201ENST00000300527 CACNG8Q8WXS5 425 aa11.79□□□□□ -0.52
COL6A2-201ENST00000300527 NDUFA4L2Q9NRX3 87 aa11.79□□□□□ -0.52
COL6A2-201ENST00000300527 GNG7O60262 68 aa11.79□□□□□ -0.52
COL6A2-201ENST00000300527 TCRAP04437 139 aa11.79□□□□□ -0.52
COL6A2-201ENST00000300527 IFI27P40305 119 aaPredicted RBP11.79□□□□□ -0.52
COL6A2-201ENST00000300527 CSN1S1P47710 185 aa11.79□□□□□ -0.52
COL6A2-201ENST00000300527 S100A7AQ86SG5 101 aa11.79□□□□□ -0.52
COL6A2-201ENST00000300527 OR1N2Q8NGR9 330 aa11.79□□□□□ -0.52
COL6A2-201ENST00000300527 RAB9BQ9NP90 201 aa11.79□□□□□ -0.52
COL6A2-201ENST00000300527 RNF7Q9UBF6 113 aa11.79□□□□□ -0.52
COL6A2-201ENST00000300527 KIR3DS1Q14943 382 aa11.78□□□□□ -0.52
COL6A2-201ENST00000300527 C2orf91Q6ZV80 131 aa11.78□□□□□ -0.52
COL6A2-201ENST00000300527 C5orf17Q8NAS9 161 aa11.78□□□□□ -0.52
COL6A2-201ENST00000300527 OR10AG1Q8NH19 301 aa11.78□□□□□ -0.52
COL6A2-201ENST00000300527 C18orf15Q96N68 181 aa11.78□□□□□ -0.52
COL6A2-201ENST00000300527 C7orf69Q9H7B7 122 aa11.78□□□□□ -0.52
COL6A2-201ENST00000300527 EP300Q09472 2414 aaPredicted RBP11.78□□□□□ -0.52
COL6A2-201ENST00000300527 IGKV1D-37A0A075B6S9 117 aa11.78□□□□□ -0.52
COL6A2-201ENST00000300527 COX8AP10176 69 aa11.78□□□□□ -0.52
COL6A2-201ENST00000300527 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.78□□□□□ -0.52
COL6A2-201ENST00000300527 PROCRQ9UNN8 238 aa11.78□□□□□ -0.52
COL6A2-201ENST00000300527 C22orf46C9J442 243 aa11.77□□□□□ -0.52
COL6A2-201ENST00000300527 K7EMI3 77 aa11.77□□□□□ -0.52
COL6A2-201ENST00000300527 RBP4P02753 201 aa11.77□□□□□ -0.52
COL6A2-201ENST00000300527 RPUSD1Q9UJJ7 312 aaKnown RBP11.77□□□□□ -0.53
COL6A2-201ENST00000300527 TMEM265A0A087WTH1 108 aa11.77□□□□□ -0.53
COL6A2-201ENST00000300527 A0A0G2JLM5 398 aa11.77□□□□□ -0.53
COL6A2-201ENST00000300527 CRXO43186 299 aaPredicted RBP11.77□□□□□ -0.53
COL6A2-201ENST00000300527 ZNF207O43670 478 aaKnown RBP11.77□□□□□ -0.53
COL6A2-201ENST00000300527 TMEM11P17152 192 aa11.77□□□□□ -0.53
COL6A2-201ENST00000300527 SRSF6Q13247 344 aaKnown RBP11.77□□□□□ -0.53
COL6A2-201ENST00000300527 OR2K2Q8NGT1 345 aa11.77□□□□□ -0.53
COL6A2-201ENST00000300527 S4R3C0 116 aa11.77□□□□□ -0.53
COL6A2-201ENST00000300527 WNK2Q9Y3S1 2297 aa11.77□□□□□ -0.53
COL6A2-201ENST00000300527 A0A1B0GUT8 65 aa11.76□□□□□ -0.53
COL6A2-201ENST00000300527 A6NDN8 102 aa11.76□□□□□ -0.53
COL6A2-201ENST00000300527 CGB3P0DN86 165 aa11.76□□□□□ -0.53
COL6A2-201ENST00000300527 CGB7P0DN87 165 aa11.76□□□□□ -0.53
COL6A2-201ENST00000300527 NEU4Q8WWR8 484 aaPredicted RBP11.76□□□□□ -0.53
COL6A2-201ENST00000300527 RITA1Q96K30 269 aa11.76□□□□□ -0.53
COL6A2-201ENST00000300527 ARRDC1-AS1Q9H2J1 176 aa11.76□□□□□ -0.53
COL6A2-201ENST00000300527 MS4A6AQ9H2W1 248 aa11.76□□□□□ -0.53
COL6A2-201ENST00000300527 SPCS1Q9Y6A9 102 aa11.76□□□□□ -0.53
COL6A2-201ENST00000300527 GCSHP23434 173 aa11.76□□□□□ -0.53
COL6A2-201ENST00000300527 PLP1P60201 277 aa11.76□□□□□ -0.53
COL6A2-201ENST00000300527 SLC25A48Q6ZT89 311 aaKnown RBP11.76□□□□□ -0.53
COL6A2-201ENST00000300527 SVIPQ8NHG7 77 aa11.76□□□□□ -0.53
COL6A2-201ENST00000300527 GUCD1Q96NT3 240 aa11.76□□□□□ -0.53
COL6A2-201ENST00000300527 CFAP47Q6ZTR5 3102 aa11.76□□□□□ -0.53
COL6A2-201ENST00000300527 SMKR1H3BMG3 65 aa11.76□□□□□ -0.53
COL6A2-201ENST00000300527 POU2AF1Q16633 256 aa11.76□□□□□ -0.53
COL6A2-201ENST00000300527 MBNL2Q5VZF2 373 aaKnown RBP11.76□□□□□ -0.53
COL6A2-201ENST00000300527 GAFA1Q96PS6 74 aa11.76□□□□□ -0.53
COL6A2-201ENST00000300527 ZNF747Q9BV97 191 aa11.76□□□□□ -0.53
COL6A2-201ENST00000300527 A0A1W2PPI3 338 aa11.75□□□□□ -0.53
COL6A2-201ENST00000300527 TTTY13Q9BZ97 58 aa11.75□□□□□ -0.53
COL6A2-201ENST00000300527 A1L4Q6 167 aa11.75□□□□□ -0.53
COL6A2-201ENST00000300527 PCP2Q8IVA1 136 aa11.75□□□□□ -0.53
COL6A2-201ENST00000300527 FAM222BQ8WU58 562 aa11.75□□□□□ -0.53
COL6A2-201ENST00000300527 FMC1Q96HJ9 113 aa11.75□□□□□ -0.53
COL6A2-201ENST00000300527 C17orf77Q96MU5 243 aa11.75□□□□□ -0.53
COL6A2-201ENST00000300527 SMG1Q96Q15 3661 aaKnown RBP11.75□□□□□ -0.53
COL6A2-201ENST00000300527 LINC01545Q5VT33 79 aa11.74□□□□□ -0.53
COL6A2-201ENST00000300527 CLEC2AQ6UVW9 174 aa11.74□□□□□ -0.53
COL6A2-201ENST00000300527 OSR1Q8TAX0 266 aaPredicted RBP11.74□□□□□ -0.53
COL6A2-201ENST00000300527 D6R8Y8 96 aa11.74□□□□□ -0.53
COL6A2-201ENST00000300527 PAX2Q02962 417 aa11.74□□□□□ -0.53
COL6A2-201ENST00000300527 MEF2CQ06413 473 aaPredicted RBP11.74□□□□□ -0.53
COL6A2-201ENST00000300527 RIGQ13278 110 aa11.74□□□□□ -0.53
COL6A2-201ENST00000300527 C1orf185Q5T7R7 199 aa11.74□□□□□ -0.53
COL6A2-201ENST00000300527 Q86TA4 180 aa11.74□□□□□ -0.53
COL6A2-201ENST00000300527 STXBP6Q8NFX7 210 aa11.74□□□□□ -0.53
COL6A2-201ENST00000300527 OR4A5Q8NH83 315 aa11.74□□□□□ -0.53
COL6A2-201ENST00000300527 MLST8Q9BVC4 326 aa11.74□□□□□ -0.53
COL6A2-201ENST00000300527 TMEM213A2RRL7 107 aa11.74□□□□□ -0.53
COL6A2-201ENST00000300527 SP9P0CG40 484 aa11.74□□□□□ -0.53
COL6A2-201ENST00000300527 TNFRSF1AP19438 455 aa11.74□□□□□ -0.53
COL6A2-201ENST00000300527 NKX2-8O15522 239 aa11.73□□□□□ -0.53
COL6A2-201ENST00000300527 NDFIP1Q9BT67 221 aa11.73□□□□□ -0.53
COL6A2-201ENST00000300527 C9orf118A6NHY6 69 aa11.73□□□□□ -0.53
COL6A2-201ENST00000300527 M0R3E3 92 aa11.73□□□□□ -0.53
COL6A2-201ENST00000300527 LTAP01374 205 aa11.73□□□□□ -0.53
COL6A2-201ENST00000300527 SEC11AP67812 179 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms