RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 LYZL4Q96KX0 146 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 C1orf147Q96MC9 270 aaPredicted RBP3.58□□□□□ -1.84
RTTN-206ENST00000581161 OR2H1Q9GZK4 316 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 FBLN5Q9UBX5 448 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 KLK5Q9Y337 293 aaPredicted RBP3.58□□□□□ -1.84
RTTN-206ENST00000581161 SERP1Q9Y6X1 66 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 E9PLN8 166 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 TIMM23O14925 209 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 MPLP40238 635 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 TIRAPP58753 221 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 MPV17LQ2QL34 196 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 HEPN1Q6WQI6 88 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 FAM168AQ92567 244 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 DERL1Q9BUN8 251 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 ERG28Q9UKR5 140 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 IQCF6A8MYZ5 107 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 TRDCB7Z8K6 153 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 M0R381 172 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 HIST1H2BKO60814 126 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 IGLV3-19P01714 112 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 HIST1H2BJP06899 126 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 HIST1H2BOP23527 126 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 HIST1H2BBP33778 126 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 HIST1H2BDP58876 126 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 HIST1H2BCP62807 126 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 HIST2H2BEQ16778 126 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.58□□□□□ -1.84
RTTN-206ENST00000581161 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.58□□□□□ -1.84
RTTN-206ENST00000581161 IBA57Q5T440 356 aaKnown RBP3.58□□□□□ -1.84
RTTN-206ENST00000581161 CLDND2Q8NHS1 167 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 SSMEM1Q8WWF3 244 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 HIST1H2BHQ93079 126 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 HIST1H2BNQ99877 126 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 HIST1H2BMQ99879 126 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 A0A1W2PR80 420 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 SRP19P09132 144 aaKnown RBP3.58□□□□□ -1.84
RTTN-206ENST00000581161 C1QTNF9P0C862 333 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 APOC4P55056 127 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 TNFRSF9Q07011 255 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 CYB5R2Q6BCY4 276 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 SLC25A47Q6Q0C1 308 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 Q96M66 194 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 EFNA2O43921 213 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 CA11O75493 328 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 REG1AP05451 166 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 RPL31P62899 125 aaKnown RBP3.58□□□□□ -1.84
RTTN-206ENST00000581161 PRR4Q16378 134 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 SRSF7Q16629 238 aaKnown RBP eCLIP3.58□□□□□ -1.84
RTTN-206ENST00000581161 C9orf153Q5TBE3 101 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 INO80CQ6PI98 192 aaPredicted RBP3.58□□□□□ -1.84
RTTN-206ENST00000581161 SRSF12Q8WXF0 261 aaKnown RBP3.58□□□□□ -1.84
RTTN-206ENST00000581161 ZNF503Q96F45 646 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 SIGLEC8Q9NYZ4 499 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 FUT9Q9Y231 359 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 RNF115Q9Y4L5 304 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 LAMA5O15230 3695 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 F2Z2F3 143 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 PRB4P10163 310 aaPredicted RBP3.57□□□□□ -1.84
RTTN-206ENST00000581161 HSPE1P61604 102 aaKnown RBP3.57□□□□□ -1.84
RTTN-206ENST00000581161 LCN2P80188 198 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 IL15RAQ13261 267 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 ARHGEF17Q96PE2 2063 aaPredicted RBP3.57□□□□□ -1.84
RTTN-206ENST00000581161 PPIAL4CA0A0B4J2A2 164 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 H0Y980 276 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 NDUFA3O95167 84 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 VENTXO95231 258 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 SNRPCP09234 159 aaKnown RBP3.57□□□□□ -1.84
RTTN-206ENST00000581161 PPIAL4GP0DN37 164 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 HOXA6P31267 233 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 UBE2AP49459 152 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 CRIP3Q6Q6R5 217 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 COLCA1Q6ZS62 124 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 C14orf144Q96I85 54 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 C18orf12Q96KH6 178 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 CCL28Q9NRJ3 127 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 HEATR5AQ86XA9 2040 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 PSPNO60542 156 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 PPYP01298 95 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 DAD1P61803 113 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 ICAM4Q14773 271 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 UNQ6494/PRO21346Q6UXR6 183 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 C5orf24Q7Z6I8 188 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 MTCH2Q9Y6C9 303 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 TRBV9A0A0B4J1U6 114 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 CD7P09564 240 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 FUSP35637 526 aaKnown RBP eCLIP3.57□□□□□ -1.84
RTTN-206ENST00000581161 CCL7P80098 99 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 MRPL14Q6P1L8 145 aaKnown RBP3.57□□□□□ -1.84
RTTN-206ENST00000581161 HIST3H2BBQ8N257 126 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 OR11H6Q8NGC7 330 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 CHCHD1Q96BP2 118 aaKnown RBP3.57□□□□□ -1.84
RTTN-206ENST00000581161 ALKBH3Q96Q83 286 aaPredicted RBP3.57□□□□□ -1.84
RTTN-206ENST00000581161 LIME1Q9H400 295 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 ITPR1Q14643 2758 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 TRAV24A0A0B4J272 114 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 CTXND1A0A1B0GTU2 59 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 SRFP11831 508 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 PCOLCEQ15113 449 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 SPEM1Q8N4L4 309 aa3.57□□□□□ -1.84
RTTN-206ENST00000581161 NEU4Q8WWR8 484 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms