RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 BAALC-AS2P0C853 105 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 COX6A1P12074 109 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 ANK1P16157 1881 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 HIST1H1TP22492 207 aaPredicted RBP-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 SPINT3P49223 89 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 ZNF137PP52743 207 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 FOXA3P55318 350 aaPredicted RBP-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 FXYD4P59646 89 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 ROMO1P60602 79 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 RAB5BP61020 215 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 SNRPD2P62316 118 aaKnown RBP-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 DYNLT1P63172 113 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 ANGPT1Q15389 498 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 ESRGQ1W209 222 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 RIC1Q4ADV7 1423 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 SPANXN3Q5MJ09 141 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 BRMS1LQ5PSV4 323 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 C1orf134Q5TEV5 83 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 C8orf74Q6P047 294 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 RPL22L1Q6P5R6 122 aaKnown RBP-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 SPINK6Q6UWN8 80 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 LRRN1Q6UXK5 716 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 ZNF833PQ6ZTB9 187 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 DEFB128Q7Z7B8 93 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 SYCE1Q8N0S2 351 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 HIST3H2BBQ8N257 126 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 EXOC3-AS1Q8N2X6 119 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 LRRC25Q8N386 305 aaPredicted RBP-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 Q8N402 240 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 OR52L1Q8NGH7 329 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 OR13C4Q8NGS5 318 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 JOSD2Q8TAC2 188 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 MRPL30Q8TCC3 161 aaKnown RBP-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 TSKUQ8WUA8 353 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 RAB8BQ92930 207 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 GPR146Q96CH1 333 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 LINC00052Q96N35 136 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 TSPAN32Q96QS1 320 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 GINS4Q9BRT9 223 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 LIMD2Q9BT23 127 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 DCUN1D5Q9BTE7 237 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 GGACTQ9BVM4 153 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 DCSTAMPQ9H295 470 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 TMEM133Q9H2Q1 129 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 MIXL1Q9H2W2 232 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 OR51I2Q9H344 312 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 BCL2L10Q9HD36 194 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 MRPL27Q9P0M9 148 aaKnown RBP-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 PLCE1Q9P212 2302 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 C3orf18Q9UK00 162 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 HS3ST2Q9Y278 367 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 ERGIC3Q9Y282 383 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 UTP11Q9Y3A2 253 aaKnown RBP-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 UBR2Q8IWV8 1755 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 NEO1Q92859 1461 aa-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 SRRM2Q9UQ35 2752 aaKnown RBP-0.17□□□□□ -2.44
FOXN3-216ENST00000557496 AKAP6Q13023 2319 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 ARHGEF11O15085 1522 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 VWFP04275 2813 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 PRKDCP78527 4128 aaKnown RBP-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 RFX7Q2KHR2 1363 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 ABCC11Q96J66 1382 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 ZFYVE9O95405 1425 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 DOPEY2Q9Y3R5 2298 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 A0A087WUJ7 227 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 TRAV26-2A0A0B4J265 109 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 A0A0D9SG52 128 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 TCRBV4S1A1TA0A5B7 111 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 FUOMA2VDF0 154 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 DPRXA6NFQ7 191 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 OR4C46A6NHA9 309 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 CLDN25C9JDP6 229 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 C5orf67F2Z3F1 127 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 GOLGA6L19H0YKK7 550 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 CHP2O43745 196 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 NEMFO60524 1076 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 CNIH1O95406 144 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 AHSA1O95433 338 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 DHFRP00374 187 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 IGLV3-1P01715 115 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 C1QBP02746 253 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 ISG15P05161 165 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 OR5G3P0C626 314 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 OR4E1P0C645 316 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 SMIM10L2AP0DMW4 78 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 SMIM10L2BP0DMW5 78 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 CAV1Q03135 178 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 OR2F1Q13607 317 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 ACOT6Q3I5F7 207 aaPredicted RBP-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 CDKL4Q5MAI5 379 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 SPANXN5Q5MJ07 72 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 LPCAT3Q6P1A2 487 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 CD200R1LQ6Q8B3 271 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 TMEM14EPQ6UXP3 125 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 DPPA3Q6W0C5 159 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 LINC00575Q6W349 94 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 PLEKHG7Q6ZR37 379 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 SLC51BQ86UW2 128 aa-0.18□□□□□ -2.44
FOXN3-216ENST00000557496 ATOH7Q8N100 152 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms