RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 WRBO00258 174 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 TGOLN2O43493 480 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 GNG7O60262 68 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 GGCTO75223 188 aaKnown RBP3.88□□□□□ -1.79
SVIP-202ENST00000525670 UPK1BO75841 260 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 GAGE7O76087 117 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 CDS2O95674 445 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 IFNA10P01566 189 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 CLEC3BP05452 202 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 GAGE12FP0CL80 117 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 GAGE12GP0CL81 117 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 GAGE12IP0CL82 117 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 HIST1H1BP16401 226 aaKnown RBP3.88□□□□□ -1.79
SVIP-202ENST00000525670 ZP3P21754 424 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 NPY1RP25929 384 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 TFPI2P48307 235 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 S100A10P60903 97 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 ERHP84090 104 aaKnown RBP3.88□□□□□ -1.79
SVIP-202ENST00000525670 RUNX1Q01196 453 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 GAGE1Q13065 139 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 GAGE4Q13068 117 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 SMCO1Q147U7 214 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 GUCA2BQ16661 112 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 TIGITQ495A1 244 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 PDLIM3Q53GG5 364 aaPredicted RBP3.88□□□□□ -1.79
SVIP-202ENST00000525670 TMEM128Q5BJH2 165 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 NMSQ5H8A3 153 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 LYG2Q86SG7 212 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 WFDC9Q8NEX5 89 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 SLC24A4Q8NFF2 622 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 OR9G4Q8NGQ1 327 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 DTD1Q8TEA8 209 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 S100ZQ8WXG8 99 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 GALNT14Q96FL9 552 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 TMEM68Q96MH6 324 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 SLC25A21Q9BQT8 299 aaPredicted RBP3.88□□□□□ -1.79
SVIP-202ENST00000525670 CCDC32Q9BV29 185 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 FNDC4Q9H6D8 234 aaPredicted RBP3.88□□□□□ -1.79
SVIP-202ENST00000525670 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.88□□□□□ -1.79
SVIP-202ENST00000525670 FKBP11Q9NYL4 201 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 GSKIPQ9P0R6 139 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 SHPKQ9UHJ6 478 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 ZNF256Q9Y2P7 627 aaPredicted RBP3.88□□□□□ -1.79
SVIP-202ENST00000525670 TMEM56-RWDD3S4R434 201 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 COL7A1Q02388 2944 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 SORL1Q92673 2214 aa3.88□□□□□ -1.79
SVIP-202ENST00000525670 TMEM213A2RRL7 107 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 SMCO3A2RU48 225 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 C2orf70A6NJV1 201 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 I3L2K1 104 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 CYB5BO43169 146 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 CCNKO75909 580 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 SIX6O95475 246 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 TCRBP04435 133 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 CSN3P07498 182 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 GP9P14770 177 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 SLC6A1P30531 599 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 RND2P52198 227 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 SPCS3P61009 180 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 RRAS2P62070 204 aaPredicted RBP3.87□□□□□ -1.79
SVIP-202ENST00000525670 POLR2GP62487 172 aaKnown RBP eCLIP3.87□□□□□ -1.79
SVIP-202ENST00000525670 SRPXP78539 464 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 TNFRSF9Q07011 255 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 KLF5Q13887 457 aaPredicted RBP3.87□□□□□ -1.79
SVIP-202ENST00000525670 KPRPQ5T749 579 aaPredicted RBP3.87□□□□□ -1.79
SVIP-202ENST00000525670 ADAMTSL5Q6ZMM2 481 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 SLC16A13Q7RTY0 426 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 NRARPQ7Z6K4 114 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 ZNF429Q86V71 674 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 OR1P1Q8NH06 330 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 COQ8AQ8NI60 647 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 TMEM170AQ8WVE7 144 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 RNF183Q96D59 192 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 OR10C1Q96KK4 312 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 CXorf58Q96LI9 332 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 UHRF2Q96PU4 802 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 C7orf50Q9BRJ6 194 aaKnown RBP3.87□□□□□ -1.79
SVIP-202ENST00000525670 MCRIP2Q9BUT9 160 aaKnown RBP3.87□□□□□ -1.79
SVIP-202ENST00000525670 BATF3Q9NR55 127 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 FAM212BQ9NTI7 297 aaPredicted RBP3.87□□□□□ -1.79
SVIP-202ENST00000525670 THYN1Q9P016 225 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 MLXQ9UH92 298 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 UBQLN2Q9UHD9 624 aa3.87□□□□□ -1.79
SVIP-202ENST00000525670 RCL1Q9Y2P8 373 aaKnown RBP3.87□□□□□ -1.79
SVIP-202ENST00000525670 LSM5Q9Y4Y9 91 aaKnown RBP3.87□□□□□ -1.79
SVIP-202ENST00000525670 DNAH7Q8WXX0 4024 aa3.86□□□□□ -1.79
SVIP-202ENST00000525670 TENM3Q9P273 2699 aa3.86□□□□□ -1.79
SVIP-202ENST00000525670 TRBV7-1A0A0A6YYK4 115 aa3.86□□□□□ -1.79
SVIP-202ENST00000525670 C5orf51A6NDU8 294 aa3.86□□□□□ -1.79
SVIP-202ENST00000525670 GOSR2O14653 212 aa3.86□□□□□ -1.79
SVIP-202ENST00000525670 NUPL2O15504 423 aaKnown RBP3.86□□□□□ -1.79
SVIP-202ENST00000525670 B3GALNT1O75752 331 aa3.86□□□□□ -1.79
SVIP-202ENST00000525670 DUS4LO95620 317 aaKnown RBP3.86□□□□□ -1.79
SVIP-202ENST00000525670 IFNA4P05014 189 aa3.86□□□□□ -1.79
SVIP-202ENST00000525670 PRB4P10163 310 aaPredicted RBP3.86□□□□□ -1.79
SVIP-202ENST00000525670 FOLR2P14207 255 aa3.86□□□□□ -1.79
SVIP-202ENST00000525670 MFAP4P55083 255 aa3.86□□□□□ -1.79
SVIP-202ENST00000525670 CD81P60033 236 aa3.86□□□□□ -1.79
SVIP-202ENST00000525670 ASAH1Q13510 395 aa3.86□□□□□ -1.79
SVIP-202ENST00000525670 OR2F1Q13607 317 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms