RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 MAGT1Q9H0U3 335 aa6.8□□□□□ -1.32
NUP50-206ENST00000422489 U3KQE9 123 aa6.8□□□□□ -1.32
NUP50-206ENST00000422489 V9GYH0 126 aa6.8□□□□□ -1.32
NUP50-206ENST00000422489 PIGBOS1A0A0B4J2F0 54 aa6.79□□□□□ -1.32
NUP50-206ENST00000422489 LINC00854A0A1B0GVQ3 168 aa6.79□□□□□ -1.32
NUP50-206ENST00000422489 WRBO00258 174 aa6.79□□□□□ -1.32
NUP50-206ENST00000422489 SFT2D2O95562 160 aa6.79□□□□□ -1.32
NUP50-206ENST00000422489 ATP5IP56385 69 aaPredicted RBP6.79□□□□□ -1.32
NUP50-206ENST00000422489 RAB11AP62491 216 aa6.79□□□□□ -1.32
NUP50-206ENST00000422489 ZNF90Q03938 601 aa6.79□□□□□ -1.32
NUP50-206ENST00000422489 OR2F1Q13607 317 aa6.79□□□□□ -1.32
NUP50-206ENST00000422489 GAMTQ14353 236 aa6.79□□□□□ -1.32
NUP50-206ENST00000422489 DCANP1Q8TF63 244 aa6.79□□□□□ -1.32
NUP50-206ENST00000422489 LINC00476Q8WZB0 136 aa6.79□□□□□ -1.32
NUP50-206ENST00000422489 TRIM63Q969Q1 353 aa6.79□□□□□ -1.32
NUP50-206ENST00000422489 CLEC5AQ9NY25 188 aa6.79□□□□□ -1.32
NUP50-206ENST00000422489 PFDN2Q9UHV9 154 aa6.79□□□□□ -1.32
NUP50-206ENST00000422489 DUXBA0A1W2PPF3 345 aa6.78□□□□□ -1.32
NUP50-206ENST00000422489 SNRPGP15A8MWD9 76 aa6.78□□□□□ -1.32
NUP50-206ENST00000422489 BUB3O43684 328 aa6.78□□□□□ -1.32
NUP50-206ENST00000422489 MED6O75586 246 aa6.78□□□□□ -1.32
NUP50-206ENST00000422489 SPP1P10451 314 aa6.78□□□□□ -1.32
NUP50-206ENST00000422489 ATF4P18848 351 aaPredicted RBP6.78□□□□□ -1.32
NUP50-206ENST00000422489 LYZP61626 148 aa6.78□□□□□ -1.32
NUP50-206ENST00000422489 SNRPD3P62318 126 aaKnown RBP6.78□□□□□ -1.32
NUP50-206ENST00000422489 RPP30P78346 268 aaKnown RBP6.78□□□□□ -1.32
NUP50-206ENST00000422489 PPP1R1AQ13522 171 aa6.78□□□□□ -1.32
NUP50-206ENST00000422489 ZNF79Q15937 498 aa6.78□□□□□ -1.32
NUP50-206ENST00000422489 SPANXN2Q5MJ10 180 aa6.78□□□□□ -1.32
NUP50-206ENST00000422489 MORN3Q6PF18 240 aaPredicted RBP6.78□□□□□ -1.32
NUP50-206ENST00000422489 SIGLEC15Q6ZMC9 328 aa6.78□□□□□ -1.32
NUP50-206ENST00000422489 TRPT1Q86TN4 253 aaKnown RBP6.78□□□□□ -1.32
NUP50-206ENST00000422489 CCDC190Q86UF4 302 aa6.78□□□□□ -1.32
NUP50-206ENST00000422489 CENPSQ8N2Z9 138 aa6.78□□□□□ -1.32
NUP50-206ENST00000422489 GLMPQ8WWB7 406 aa6.78□□□□□ -1.32
NUP50-206ENST00000422489 PPP1R14BQ96C90 147 aa6.78□□□□□ -1.32
NUP50-206ENST00000422489 LINC00052Q96N35 136 aa6.78□□□□□ -1.32
NUP50-206ENST00000422489 MFFQ9GZY8 342 aa6.78□□□□□ -1.32
NUP50-206ENST00000422489 DYNC2H1Q8NCM8 4307 aaKnown RBP6.78□□□□□ -1.32
NUP50-206ENST00000422489 STARD9Q9P2P6 4700 aa6.78□□□□□ -1.32
NUP50-206ENST00000422489 FAM90A26D6RGX4 464 aa6.77□□□□□ -1.33
NUP50-206ENST00000422489 PITX3O75364 302 aa6.77□□□□□ -1.33
NUP50-206ENST00000422489 IGKV3-20P01619 116 aa6.77□□□□□ -1.33
NUP50-206ENST00000422489 FABP1P07148 127 aa6.77□□□□□ -1.33
NUP50-206ENST00000422489 GGNBP1Q5YKI7 109 aa6.77□□□□□ -1.33
NUP50-206ENST00000422489 TRIQKQ629K1 86 aa6.77□□□□□ -1.33
NUP50-206ENST00000422489 GSG1LQ6UXU4 331 aa6.77□□□□□ -1.33
NUP50-206ENST00000422489 LRTM2Q8N967 370 aa6.77□□□□□ -1.33
NUP50-206ENST00000422489 RNF125Q96EQ8 232 aa6.77□□□□□ -1.33
NUP50-206ENST00000422489 NRN1Q9NPD7 142 aa6.77□□□□□ -1.33
NUP50-206ENST00000422489 TMED3Q9Y3Q3 217 aa6.77□□□□□ -1.33
NUP50-206ENST00000422489 CSMD3Q7Z407 3707 aa6.76□□□□□ -1.33
NUP50-206ENST00000422489 IGHV4-28A0A0C4DH34 117 aa6.76□□□□□ -1.33
NUP50-206ENST00000422489 SYNGR2O43760 224 aa6.76□□□□□ -1.33
NUP50-206ENST00000422489 ADAP1O75689 374 aa6.76□□□□□ -1.33
NUP50-206ENST00000422489 GIG44P09565 113 aaPredicted RBP6.76□□□□□ -1.33
NUP50-206ENST00000422489 SLC25A6P12236 298 aa6.76□□□□□ -1.33
NUP50-206ENST00000422489 C4BPBP20851 252 aa6.76□□□□□ -1.33
NUP50-206ENST00000422489 NUP62P37198 522 aaPredicted RBP6.76□□□□□ -1.33
NUP50-206ENST00000422489 ID1P41134 155 aa6.76□□□□□ -1.33
NUP50-206ENST00000422489 BAK1Q16611 211 aa6.76□□□□□ -1.33
NUP50-206ENST00000422489 TMEM41BQ5BJD5 291 aa6.76□□□□□ -1.33
NUP50-206ENST00000422489 SPANXN5Q5MJ07 72 aa6.76□□□□□ -1.33
NUP50-206ENST00000422489 CIB3Q96Q77 187 aaPredicted RBP6.76□□□□□ -1.33
NUP50-206ENST00000422489 C11orf68Q9H3H3 251 aaKnown RBP6.76□□□□□ -1.33
NUP50-206ENST00000422489 XCL2Q9UBD3 114 aa6.76□□□□□ -1.33
NUP50-206ENST00000422489 FLVCR2Q9UPI3 526 aa6.76□□□□□ -1.33
NUP50-206ENST00000422489 IGKV1D-37A0A075B6S9 117 aa6.75□□□□□ -1.33
NUP50-206ENST00000422489 C9orf170A2RU37 121 aa6.75□□□□□ -1.33
NUP50-206ENST00000422489 NAP1L6A6NFF2 107 aa6.75□□□□□ -1.33
NUP50-206ENST00000422489 CENPXA8MT69 81 aa6.75□□□□□ -1.33
NUP50-206ENST00000422489 H3BP45 60 aa6.75□□□□□ -1.33
NUP50-206ENST00000422489 IFNA21P01568 189 aa6.75□□□□□ -1.33
NUP50-206ENST00000422489 RBMY1A1P0DJD3 496 aaKnown RBP6.75□□□□□ -1.33
NUP50-206ENST00000422489 RBMY1CP0DJD4 496 aa6.75□□□□□ -1.33
NUP50-206ENST00000422489 FXYD7P58549 80 aa6.75□□□□□ -1.33
NUP50-206ENST00000422489 NUTF2P61970 127 aaKnown RBP6.75□□□□□ -1.33
NUP50-206ENST00000422489 RBMY1FQ15415 496 aaKnown RBP6.75□□□□□ -1.33
NUP50-206ENST00000422489 LINC01559Q495D7 138 aa6.75□□□□□ -1.33
NUP50-206ENST00000422489 OR8G2PQ6IF36 304 aa6.75□□□□□ -1.33
NUP50-206ENST00000422489 OR8I2Q8N0Y5 310 aa6.75□□□□□ -1.33
NUP50-206ENST00000422489 C2CD4CQ8TF44 421 aa6.75□□□□□ -1.33
NUP50-206ENST00000422489 DEDD2Q8WXF8 326 aa6.75□□□□□ -1.33
NUP50-206ENST00000422489 TRGV9Q99603 122 aa6.75□□□□□ -1.33
NUP50-206ENST00000422489 SRRQ9GZT4 340 aa6.75□□□□□ -1.33
NUP50-206ENST00000422489 RBM38Q9H0Z9 239 aaKnown RBP6.75□□□□□ -1.33
NUP50-206ENST00000422489 TBC1D24Q9ULP9 559 aa6.75□□□□□ -1.33
NUP50-206ENST00000422489 STRAPQ9Y3F4 350 aaKnown RBP6.75□□□□□ -1.33
NUP50-206ENST00000422489 SMCO3A2RU48 225 aa6.74□□□□□ -1.33
NUP50-206ENST00000422489 IGLL5B9A064 214 aa6.74□□□□□ -1.33
NUP50-206ENST00000422489 H3BMM0 161 aa6.74□□□□□ -1.33
NUP50-206ENST00000422489 NDUFB6O95139 128 aa6.74□□□□□ -1.33
NUP50-206ENST00000422489 MIFP14174 115 aa6.74□□□□□ -1.33
NUP50-206ENST00000422489 ORM2P19652 201 aa6.74□□□□□ -1.33
NUP50-206ENST00000422489 GATA2P23769 480 aaPredicted RBP6.74□□□□□ -1.33
NUP50-206ENST00000422489 HLA-DMBP28068 263 aa6.74□□□□□ -1.33
NUP50-206ENST00000422489 DEFB1P60022 68 aa6.74□□□□□ -1.33
NUP50-206ENST00000422489 POLR2GP62487 172 aaKnown RBP eCLIP6.74□□□□□ -1.33
NUP50-206ENST00000422489 C4orf46Q504U0 113 aa6.74□□□□□ -1.33
NUP50-206ENST00000422489 Q8NAQ8 132 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms