RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 CCDC144NLQ6NUI1 221 aa6.48□□□□□ -1.37
CD44-205ENST00000352818 PPP1R27Q86WC6 154 aa6.48□□□□□ -1.37
CD44-205ENST00000352818 OR1P1Q8NH06 330 aa6.48□□□□□ -1.37
CD44-205ENST00000352818 SSMEM1Q8WWF3 244 aa6.48□□□□□ -1.37
CD44-205ENST00000352818 HIST1H2BAQ96A08 127 aa6.48□□□□□ -1.37
CD44-205ENST00000352818 MALSU1Q96EH3 234 aa6.48□□□□□ -1.37
CD44-205ENST00000352818 RITA1Q96K30 269 aa6.48□□□□□ -1.37
CD44-205ENST00000352818 TBX15Q96SF7 602 aa6.48□□□□□ -1.37
CD44-205ENST00000352818 MRPL32Q9BYC8 188 aaKnown RBP6.48□□□□□ -1.37
CD44-205ENST00000352818 TMPRSS5Q9H3S3 457 aa6.48□□□□□ -1.37
CD44-205ENST00000352818 SDF2L1Q9HCN8 221 aa6.48□□□□□ -1.37
CD44-205ENST00000352818 METTL1Q9UBP6 276 aaKnown RBP6.48□□□□□ -1.37
CD44-205ENST00000352818 NAT8Q9UHE5 227 aa6.48□□□□□ -1.37
CD44-205ENST00000352818 FUT9Q9Y231 359 aa6.48□□□□□ -1.37
CD44-205ENST00000352818 TBL2Q9Y4P3 447 aaKnown RBP6.48□□□□□ -1.37
CD44-205ENST00000352818 DNAH10Q8IVF4 4471 aa6.47□□□□□ -1.37
CD44-205ENST00000352818 TCRBV4S1A1TA0A5B7 111 aa6.47□□□□□ -1.37
CD44-205ENST00000352818 PSMB11A5LHX3 300 aa6.47□□□□□ -1.37
CD44-205ENST00000352818 HOXA3O43365 443 aaPredicted RBP6.47□□□□□ -1.37
CD44-205ENST00000352818 PAGE4O60829 102 aa6.47□□□□□ -1.37
CD44-205ENST00000352818 CLN5O75503 358 aa6.47□□□□□ -1.37
CD44-205ENST00000352818 MOSP00540 346 aa6.47□□□□□ -1.37
CD44-205ENST00000352818 ARL14EPLP0DKL9 152 aa6.47□□□□□ -1.37
CD44-205ENST00000352818 AREGP15514 252 aa6.47□□□□□ -1.37
CD44-205ENST00000352818 CNTFRP26992 372 aa6.47□□□□□ -1.37
CD44-205ENST00000352818 GCHFRP30047 84 aa6.47□□□□□ -1.37
CD44-205ENST00000352818 OR10J1P30954 320 aa6.47□□□□□ -1.37
CD44-205ENST00000352818 DLX1P56177 255 aa6.47□□□□□ -1.37
CD44-205ENST00000352818 SELENOTP62341 195 aa6.47□□□□□ -1.37
CD44-205ENST00000352818 SSBP2P81877 361 aaPredicted RBP6.47□□□□□ -1.37
CD44-205ENST00000352818 EBI3Q14213 229 aa6.47□□□□□ -1.37
CD44-205ENST00000352818 TNXAQ16473 311 aa6.47□□□□□ -1.37
CD44-205ENST00000352818 LDLRAD2Q5SZI1 272 aa6.47□□□□□ -1.37
CD44-205ENST00000352818 VMO1Q7Z5L0 202 aa6.47□□□□□ -1.37
CD44-205ENST00000352818 ABHD5Q8WTS1 349 aa6.47□□□□□ -1.37
CD44-205ENST00000352818 GATAD1Q8WUU5 269 aa6.47□□□□□ -1.37
CD44-205ENST00000352818 B9D2Q9BPU9 175 aa6.47□□□□□ -1.37
CD44-205ENST00000352818 SMIM7Q9BQ49 75 aa6.47□□□□□ -1.37
CD44-205ENST00000352818 CTDSP1Q9GZU7 261 aa6.47□□□□□ -1.37
CD44-205ENST00000352818 FNDC4Q9H6D8 234 aaPredicted RBP6.47□□□□□ -1.37
CD44-205ENST00000352818 TECRQ9NZ01 308 aaKnown RBP6.47□□□□□ -1.37
CD44-205ENST00000352818 TNCP24821 2201 aa6.47□□□□□ -1.37
CD44-205ENST00000352818 ZNF727A8MUV8 499 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 C11orf94C9JXX5 98 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 HMGB3O15347 200 aaKnown RBP6.46□□□□□ -1.38
CD44-205ENST00000352818 NBR2O15453 112 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 FOXH1O75593 365 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 OR2C1O95371 312 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 DEFA4P12838 97 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 RND2P52198 227 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 CEBPGP53567 150 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 TAS2R45P59539 299 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 KLRD1Q13241 179 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 AKIRIN2Q53H80 203 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 PQLC2Q6ZP29 291 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 Q8N6K4 173 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 TMEM116Q8NCL8 245 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 OR1L6Q8NGR2 347 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 OR1L4Q8NGR5 311 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 OR2T10Q8NGZ9 312 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 SRSF12Q8WXF0 261 aaKnown RBP6.46□□□□□ -1.38
CD44-205ENST00000352818 C11orf52Q96A22 123 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 OR4F4Q96R69 305 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 PFDN5Q99471 154 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 TRGV9Q99603 122 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 C20orf24Q9BUV8 137 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 PARLQ9H300 379 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 SEPSECSQ9HD40 501 aaKnown RBP6.46□□□□□ -1.38
CD44-205ENST00000352818 TMEM167BQ9NRX6 74 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 DOK5Q9P104 306 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 F11RQ9Y624 299 aaKnown RBP6.46□□□□□ -1.38
CD44-205ENST00000352818 ALMS1Q8TCU4 4167 aa6.46□□□□□ -1.38
CD44-205ENST00000352818 IGKV1D-37A0A075B6S9 117 aa6.45□□□□□ -1.38
CD44-205ENST00000352818 EIF3GO75821 320 aaKnown RBP eCLIP6.45□□□□□ -1.38
CD44-205ENST00000352818 AKR1C3P42330 323 aa6.45□□□□□ -1.38
CD44-205ENST00000352818 UBE2E1P51965 193 aa6.45□□□□□ -1.38
CD44-205ENST00000352818 MFAP2P55001 183 aa6.45□□□□□ -1.38
CD44-205ENST00000352818 BPIFB3P59826 476 aa6.45□□□□□ -1.38
CD44-205ENST00000352818 MMDQ15546 238 aa6.45□□□□□ -1.38
CD44-205ENST00000352818 TMEM241Q24JQ0 296 aa6.45□□□□□ -1.38
CD44-205ENST00000352818 IQCF2Q8IXL9 164 aa6.45□□□□□ -1.38
CD44-205ENST00000352818 MUC7Q8TAX7 377 aa6.45□□□□□ -1.38
CD44-205ENST00000352818 EAF1Q96JC9 268 aaPredicted RBP6.45□□□□□ -1.38
CD44-205ENST00000352818 FBXL15Q9H469 300 aa6.45□□□□□ -1.38
CD44-205ENST00000352818 MLXQ9UH92 298 aa6.45□□□□□ -1.38
CD44-205ENST00000352818 U3KQK5 164 aa6.45□□□□□ -1.38
CD44-205ENST00000352818 IGHV3OR16-10A0A075B7F0 116 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 ELOA3CA0A087WX78 387 aaPredicted RBP6.44□□□□□ -1.38
CD44-205ENST00000352818 NPIPB5A8MRT5 1133 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 TGOLN2O43493 480 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 TOX4O94842 621 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 CRYBA1P05813 215 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 C8orf88P0DMB2 117 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 IGHV4-38-2P0DP08 117 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 CTRB1P17538 263 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 RAB5AP20339 215 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 NPPCP23582 126 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 ATP5G3P48201 142 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 LGALS4P56470 323 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 PLP1P60201 277 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms