RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 TRAV9-1A0A075B6T8 112 aa0.33□□□□□ -2.36
GPN3-209ENST00000551079 TRAV26-2A0A0B4J265 109 aa0.33□□□□□ -2.36
GPN3-209ENST00000551079 OR4C46A6NHA9 309 aa0.33□□□□□ -2.36
GPN3-209ENST00000551079 PSMD12O00232 456 aaPredicted RBP0.33□□□□□ -2.36
GPN3-209ENST00000551079 SULT1B1O43704 296 aa0.33□□□□□ -2.36
GPN3-209ENST00000551079 CNIH1O95406 144 aa0.33□□□□□ -2.36
GPN3-209ENST00000551079 MGST1P10620 155 aaKnown RBP0.33□□□□□ -2.36
GPN3-209ENST00000551079 RANP62826 216 aaKnown RBP0.33□□□□□ -2.36
GPN3-209ENST00000551079 ACOT6Q3I5F7 207 aaPredicted RBP0.33□□□□□ -2.36
GPN3-209ENST00000551079 SPATA8Q6RVD6 105 aa0.33□□□□□ -2.36
GPN3-209ENST00000551079 SOSTDC1Q6X4U4 206 aa0.33□□□□□ -2.36
GPN3-209ENST00000551079 ADAT3Q96EY9 351 aaPredicted RBP0.33□□□□□ -2.36
GPN3-209ENST00000551079 TMEM70Q9BUB7 260 aa0.33□□□□□ -2.36
GPN3-209ENST00000551079 RNASE7Q9H1E1 156 aaKnown RBP0.33□□□□□ -2.36
GPN3-209ENST00000551079 C14orf105Q9NVL8 296 aa0.33□□□□□ -2.36
GPN3-209ENST00000551079 HS3ST2Q9Y278 367 aa0.33□□□□□ -2.36
GPN3-209ENST00000551079 TMEM56-RWDD3S4R434 201 aa0.33□□□□□ -2.36
GPN3-209ENST00000551079 ARHGEF28Q8N1W1 1705 aaKnown RBP0.33□□□□□ -2.36
GPN3-209ENST00000551079 PEAK1Q9H792 1746 aa0.33□□□□□ -2.36
GPN3-209ENST00000551079 NUP155O75694 1391 aa0.32□□□□□ -2.36
GPN3-209ENST00000551079 FREM3P0C091 2139 aa0.32□□□□□ -2.36
GPN3-209ENST00000551079 SPTBP11277 2137 aa0.32□□□□□ -2.36
GPN3-209ENST00000551079 PHRF1Q9P1Y6 1649 aaKnown RBP0.32□□□□□ -2.36
GPN3-209ENST00000551079 KIF1BO60333 1816 aa0.32□□□□□ -2.36
GPN3-209ENST00000551079 PQLC2LA1A4F0 135 aa0.32□□□□□ -2.36
GPN3-209ENST00000551079 PROSCO94903 275 aa0.32□□□□□ -2.36
GPN3-209ENST00000551079 IFNA16P05015 189 aa0.32□□□□□ -2.36
GPN3-209ENST00000551079 RPS17P08708 135 aaKnown RBP0.32□□□□□ -2.36
GPN3-209ENST00000551079 SRIP30626 198 aa0.32□□□□□ -2.36
GPN3-209ENST00000551079 MYL6P60660 151 aa0.32□□□□□ -2.36
GPN3-209ENST00000551079 PSME3P61289 254 aa0.32□□□□□ -2.36
GPN3-209ENST00000551079 MPV17LQ2QL34 196 aa0.32□□□□□ -2.36
GPN3-209ENST00000551079 OR10J5Q8NHC4 309 aa0.32□□□□□ -2.36
GPN3-209ENST00000551079 BORCS5Q969J3 196 aa0.32□□□□□ -2.36
GPN3-209ENST00000551079 MRPS26Q9BYN8 205 aaKnown RBP0.32□□□□□ -2.36
GPN3-209ENST00000551079 OR51V1Q9H2C8 321 aa0.32□□□□□ -2.36
GPN3-209ENST00000551079 NEO1Q92859 1461 aa0.32□□□□□ -2.36
GPN3-209ENST00000551079 ZGRF1Q86YA3 2104 aa0.32□□□□□ -2.36
GPN3-209ENST00000551079 PTPRFP10586 1907 aa0.32□□□□□ -2.36
GPN3-209ENST00000551079 CCDC144AA2RUR9 1427 aa0.31□□□□□ -2.36
GPN3-209ENST00000551079 NUP210LQ5VU65 1888 aa0.31□□□□□ -2.36
GPN3-209ENST00000551079 A0A087WUJ7 227 aa0.31□□□□□ -2.36
GPN3-209ENST00000551079 A0A1W2PPM0 123 aa0.31□□□□□ -2.36
GPN3-209ENST00000551079 CLDN24A6NM45 220 aa0.31□□□□□ -2.36
GPN3-209ENST00000551079 CD79AP11912 226 aa0.31□□□□□ -2.36
GPN3-209ENST00000551079 ZNF25P17030 456 aaPredicted RBP0.31□□□□□ -2.36
GPN3-209ENST00000551079 MAGOHP61326 146 aaKnown RBP0.31□□□□□ -2.36
GPN3-209ENST00000551079 LSM6P62312 80 aaKnown RBP0.31□□□□□ -2.36
GPN3-209ENST00000551079 ITGB3BPQ13352 177 aaPredicted RBP0.31□□□□□ -2.36
GPN3-209ENST00000551079 IMPG1Q17R60 797 aa0.31□□□□□ -2.36
GPN3-209ENST00000551079 LINC01554Q52M75 96 aa0.31□□□□□ -2.36
GPN3-209ENST00000551079 C12orf45Q8N5I9 185 aaPredicted RBP0.31□□□□□ -2.36
GPN3-209ENST00000551079 CLDN22Q8N7P3 220 aa0.31□□□□□ -2.36
GPN3-209ENST00000551079 C3orf56Q8N813 242 aa0.31□□□□□ -2.36
GPN3-209ENST00000551079 OR8J2Q8NGG1 315 aa0.31□□□□□ -2.36
GPN3-209ENST00000551079 C4orf3Q8WVX3 66 aa0.31□□□□□ -2.36
GPN3-209ENST00000551079 CDC42SE1Q9NRR8 79 aa0.31□□□□□ -2.36
GPN3-209ENST00000551079 NHP2Q9NX24 153 aaKnown RBP0.31□□□□□ -2.36
GPN3-209ENST00000551079 V9GYY5 206 aaPredicted RBP0.31□□□□□ -2.36
GPN3-209ENST00000551079 COL1A1P02452 1464 aaPredicted RBP0.3□□□□□ -2.36
GPN3-209ENST00000551079 FRAS1Q86XX4 4008 aa0.3□□□□□ -2.36
GPN3-209ENST00000551079 SMIM9A6NGZ8 99 aa0.3□□□□□ -2.36
GPN3-209ENST00000551079 C1orf196B1AJZ1 125 aa0.3□□□□□ -2.36
GPN3-209ENST00000551079 ZNF736B4DX44 427 aaPredicted RBP0.3□□□□□ -2.36
GPN3-209ENST00000551079 NCR3O14931 201 aa0.3□□□□□ -2.36
GPN3-209ENST00000551079 NIPSNAP2O75323 286 aa0.3□□□□□ -2.36
GPN3-209ENST00000551079 CRYZL1O95825 349 aa0.3□□□□□ -2.36
GPN3-209ENST00000551079 TCRBP04435 133 aa0.3□□□□□ -2.36
GPN3-209ENST00000551079 SMIM10L2AP0DMW4 78 aa0.3□□□□□ -2.36
GPN3-209ENST00000551079 SMIM10L2BP0DMW5 78 aa0.3□□□□□ -2.36
GPN3-209ENST00000551079 SPOPLQ6IQ16 392 aa0.3□□□□□ -2.36
GPN3-209ENST00000551079 Q8IYB0 196 aa0.3□□□□□ -2.36
GPN3-209ENST00000551079 OTUD6BQ8N6M0 293 aa0.3□□□□□ -2.36
GPN3-209ENST00000551079 GPR146Q96CH1 333 aa0.3□□□□□ -2.36
GPN3-209ENST00000551079 C20orf27Q9GZN8 174 aa0.3□□□□□ -2.36
GPN3-209ENST00000551079 OSTCQ9NRP0 149 aa0.3□□□□□ -2.36
GPN3-209ENST00000551079 UQCC1Q9NVA1 299 aa0.3□□□□□ -2.36
GPN3-209ENST00000551079 EPDR1Q9UM22 224 aa0.3□□□□□ -2.36
GPN3-209ENST00000551079 NOSIPQ9Y314 301 aaKnown RBP0.3□□□□□ -2.36
GPN3-209ENST00000551079 MED1Q15648 1581 aaPredicted RBP0.3□□□□□ -2.36
GPN3-209ENST00000551079 SIP14410 1827 aa0.29□□□□□ -2.36
GPN3-209ENST00000551079 B4DSR2 109 aa0.29□□□□□ -2.36
GPN3-209ENST00000551079 KPNA3O00505 521 aaPredicted RBP0.29□□□□□ -2.36
GPN3-209ENST00000551079 ZNF682O95780 498 aa0.29□□□□□ -2.36
GPN3-209ENST00000551079 TTRP02766 147 aa0.29□□□□□ -2.36
GPN3-209ENST00000551079 SMIM17P0DL12 118 aa0.29□□□□□ -2.36
GPN3-209ENST00000551079 SULT1A1P50225 295 aa0.29□□□□□ -2.36
GPN3-209ENST00000551079 SERPINB9P50453 376 aa0.29□□□□□ -2.36
GPN3-209ENST00000551079 AESQ08117 197 aa0.29□□□□□ -2.36
GPN3-209ENST00000551079 SRSF6Q13247 344 aaKnown RBP0.29□□□□□ -2.36
GPN3-209ENST00000551079 C12orf74Q32Q52 190 aa0.29□□□□□ -2.36
GPN3-209ENST00000551079 TEX261Q6UWH6 196 aa0.29□□□□□ -2.36
GPN3-209ENST00000551079 TRAPPC6BQ86SZ2 158 aa0.29□□□□□ -2.36
GPN3-209ENST00000551079 CLECL1Q8IZS7 167 aa0.29□□□□□ -2.36
GPN3-209ENST00000551079 OR8D4Q8NGM9 314 aa0.29□□□□□ -2.36
GPN3-209ENST00000551079 OR13D1Q8NGV5 346 aa0.29□□□□□ -2.36
GPN3-209ENST00000551079 CCDC42Q96M95 316 aa0.29□□□□□ -2.36
GPN3-209ENST00000551079 DCSTAMPQ9H295 470 aa0.29□□□□□ -2.36
GPN3-209ENST00000551079 C10orf95Q9H7T3 257 aa0.29□□□□□ -2.36
GPN3-209ENST00000551079 IDI2-AS1Q9NZ38 188 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms