RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 C4orf46Q504U0 113 aa12.96□□□□□ -0.33
USP35-202ENST00000528910 DEFB125Q8N687 156 aa12.96□□□□□ -0.33
USP35-202ENST00000528910 MITD1Q8WV92 249 aa12.96□□□□□ -0.33
USP35-202ENST00000528910 RCHY1Q96PM5 261 aa12.96□□□□□ -0.33
USP35-202ENST00000528910 CIB3Q96Q77 187 aaPredicted RBP12.96□□□□□ -0.33
USP35-202ENST00000528910 SRD5A3Q9H8P0 318 aa12.96□□□□□ -0.33
USP35-202ENST00000528910 IGHV3-49A0A0A0MS15 119 aa12.95□□□□□ -0.34
USP35-202ENST00000528910 SYNGR2O43760 224 aa12.95□□□□□ -0.34
USP35-202ENST00000528910 TCRBP04435 133 aa12.95□□□□□ -0.34
USP35-202ENST00000528910 OR10J1P30954 320 aa12.95□□□□□ -0.34
USP35-202ENST00000528910 BMI1P35226 326 aa12.95□□□□□ -0.34
USP35-202ENST00000528910 YPEL3P61236 119 aaPredicted RBP12.95□□□□□ -0.34
USP35-202ENST00000528910 HAGHQ16775 308 aa12.95□□□□□ -0.34
USP35-202ENST00000528910 FAM90A2PQ658T7 463 aa12.95□□□□□ -0.34
USP35-202ENST00000528910 FAM110AQ9BQ89 295 aa12.95□□□□□ -0.34
USP35-202ENST00000528910 WDR12Q9GZL7 423 aaKnown RBP12.95□□□□□ -0.34
USP35-202ENST00000528910 TBC1D24Q9ULP9 559 aa12.95□□□□□ -0.34
USP35-202ENST00000528910 RBMY1BA6NDE4 496 aaKnown RBP12.94□□□□□ -0.34
USP35-202ENST00000528910 RBMY1EA6NEQ0 496 aaKnown RBP12.94□□□□□ -0.34
USP35-202ENST00000528910 OR4C46A6NHA9 309 aa12.94□□□□□ -0.34
USP35-202ENST00000528910 MPTX1A8MV57 137 aa12.94□□□□□ -0.34
USP35-202ENST00000528910 CD5P06127 495 aa12.94□□□□□ -0.34
USP35-202ENST00000528910 RBMY1DP0C7P1 496 aaKnown RBP12.94□□□□□ -0.34
USP35-202ENST00000528910 IAPPP10997 89 aa12.94□□□□□ -0.34
USP35-202ENST00000528910 GPX4P36969 197 aaPredicted RBP12.94□□□□□ -0.34
USP35-202ENST00000528910 ASAH1Q13510 395 aa12.94□□□□□ -0.34
USP35-202ENST00000528910 OR4D5Q8NGN0 318 aa12.94□□□□□ -0.34
USP35-202ENST00000528910 ST8SIA2Q92186 375 aa12.94□□□□□ -0.34
USP35-202ENST00000528910 ZMAT4Q9H898 229 aa12.94□□□□□ -0.34
USP35-202ENST00000528910 BATF3Q9NR55 127 aa12.94□□□□□ -0.34
USP35-202ENST00000528910 NUDT15Q9NV35 164 aa12.94□□□□□ -0.34
USP35-202ENST00000528910 IFNA21P01568 189 aa12.93□□□□□ -0.34
USP35-202ENST00000528910 APOHP02749 345 aaPredicted RBP12.93□□□□□ -0.34
USP35-202ENST00000528910 IFNA4P05014 189 aa12.93□□□□□ -0.34
USP35-202ENST00000528910 CRYBB3P26998 211 aa12.93□□□□□ -0.34
USP35-202ENST00000528910 ID3Q02535 119 aa12.93□□□□□ -0.34
USP35-202ENST00000528910 ODF3L2Q3SX64 289 aa12.93□□□□□ -0.34
USP35-202ENST00000528910 NPIPB3Q92617 1050 aa12.93□□□□□ -0.34
USP35-202ENST00000528910 ACY3Q96HD9 319 aa12.93□□□□□ -0.34
USP35-202ENST00000528910 METTL26Q96S19 204 aa12.93□□□□□ -0.34
USP35-202ENST00000528910 SPATA25Q9BR10 227 aa12.93□□□□□ -0.34
USP35-202ENST00000528910 MAGT1Q9H0U3 335 aa12.93□□□□□ -0.34
USP35-202ENST00000528910 IGHV3OR16-13A0A075B7E8 117 aa12.92□□□□□ -0.34
USP35-202ENST00000528910 IGHV3-74A0A0B4J1X5 117 aa12.92□□□□□ -0.34
USP35-202ENST00000528910 PRSS46E5RG02 174 aa12.92□□□□□ -0.34
USP35-202ENST00000528910 UPK1BO75841 260 aa12.92□□□□□ -0.34
USP35-202ENST00000528910 TOMM40O96008 361 aa12.92□□□□□ -0.34
USP35-202ENST00000528910 RAB11AP62491 216 aa12.92□□□□□ -0.34
USP35-202ENST00000528910 ZNF846Q147U1 533 aa12.92□□□□□ -0.34
USP35-202ENST00000528910 TMEM231Q9H6L2 316 aa12.92□□□□□ -0.34
USP35-202ENST00000528910 TRAV6A0A075B6T7 132 aa12.91□□□□□ -0.34
USP35-202ENST00000528910 NPPCP23582 126 aa12.91□□□□□ -0.34
USP35-202ENST00000528910 NKX2-1P43699 371 aaPredicted RBP12.91□□□□□ -0.34
USP35-202ENST00000528910 RPP30P78346 268 aaKnown RBP12.91□□□□□ -0.34
USP35-202ENST00000528910 GAMTQ14353 236 aa12.91□□□□□ -0.34
USP35-202ENST00000528910 TCF24Q7RTU0 167 aa12.91□□□□□ -0.34
USP35-202ENST00000528910 SLC35E1Q96K37 410 aa12.91□□□□□ -0.34
USP35-202ENST00000528910 CITED4Q96RK1 184 aa12.91□□□□□ -0.34
USP35-202ENST00000528910 U3KQE9 123 aa12.91□□□□□ -0.34
USP35-202ENST00000528910 IGKV1D-37A0A075B6S9 117 aa12.9□□□□□ -0.34
USP35-202ENST00000528910 TRAV2A0A0B4J234 112 aa12.9□□□□□ -0.34
USP35-202ENST00000528910 A0A1W2PS18 150 aa12.9□□□□□ -0.34
USP35-202ENST00000528910 WRBO00258 174 aa12.9□□□□□ -0.34
USP35-202ENST00000528910 MZT2BQ6NZ67 158 aa12.9□□□□□ -0.34
USP35-202ENST00000528910 LILRB2Q8N423 598 aa12.9□□□□□ -0.34
USP35-202ENST00000528910 Q8WTZ3 238 aa12.9□□□□□ -0.34
USP35-202ENST00000528910 FAM240BA0A1B0GVZ2 78 aa12.89□□□□□ -0.35
USP35-202ENST00000528910 IL4P05112 153 aa12.89□□□□□ -0.35
USP35-202ENST00000528910 POLR2GP62487 172 aaKnown RBP eCLIP12.89□□□□□ -0.35
USP35-202ENST00000528910 USF2Q15853 346 aaPredicted RBP12.89□□□□□ -0.35
USP35-202ENST00000528910 IAH1Q2TAA2 248 aaPredicted RBP12.89□□□□□ -0.35
USP35-202ENST00000528910 ZBTB8BQ8NAP8 495 aaPredicted RBP12.89□□□□□ -0.35
USP35-202ENST00000528910 ZNF431Q8TF32 576 aaPredicted RBP12.89□□□□□ -0.35
USP35-202ENST00000528910 GGTLC1Q9BX51 225 aa12.89□□□□□ -0.35
USP35-202ENST00000528910 UBQLN2Q9UHD9 624 aa12.89□□□□□ -0.35
USP35-202ENST00000528910 IGHV3-66A0A0C4DH42 116 aa12.88□□□□□ -0.35
USP35-202ENST00000528910 H3BP45 60 aa12.88□□□□□ -0.35
USP35-202ENST00000528910 DFFBO76075 338 aa12.88□□□□□ -0.35
USP35-202ENST00000528910 HNRNPCP07910 306 aaKnown RBP eCLIP12.88□□□□□ -0.35
USP35-202ENST00000528910 H2AFB2P0C5Z0 115 aa12.88□□□□□ -0.35
USP35-202ENST00000528910 RD3LP0DJH9 198 aa12.88□□□□□ -0.35
USP35-202ENST00000528910 PSG1P11464 419 aa12.88□□□□□ -0.35
USP35-202ENST00000528910 P2RY1P47900 373 aa12.88□□□□□ -0.35
USP35-202ENST00000528910 IFITM3Q01628 133 aa12.88□□□□□ -0.35
USP35-202ENST00000528910 SPANXN5Q5MJ07 72 aa12.88□□□□□ -0.35
USP35-202ENST00000528910 THAP8Q8NA92 274 aa12.88□□□□□ -0.35
USP35-202ENST00000528910 NARS2Q96I59 477 aaKnown RBP12.88□□□□□ -0.35
USP35-202ENST00000528910 SEC22CQ9BRL7 303 aa12.88□□□□□ -0.35
USP35-202ENST00000528910 RCL1Q9Y2P8 373 aaKnown RBP12.88□□□□□ -0.35
USP35-202ENST00000528910 STRAPQ9Y3F4 350 aaKnown RBP12.88□□□□□ -0.35
USP35-202ENST00000528910 LOC102724200A0A096LPH7 203 aaPredicted RBP12.87□□□□□ -0.35
USP35-202ENST00000528910 ZFP92A6NM28 416 aa12.87□□□□□ -0.35
USP35-202ENST00000528910 SSSCA1O60232 199 aa12.87□□□□□ -0.35
USP35-202ENST00000528910 OR51G1Q8NGK1 321 aa12.87□□□□□ -0.35
USP35-202ENST00000528910 GLMPQ8WWB7 406 aa12.87□□□□□ -0.35
USP35-202ENST00000528910 RNF125Q96EQ8 232 aa12.87□□□□□ -0.35
USP35-202ENST00000528910 GRAMD2BQ96HH9 432 aa12.87□□□□□ -0.35
USP35-202ENST00000528910 SMIM8Q96KF7 97 aa12.87□□□□□ -0.35
USP35-202ENST00000528910 TRGV9Q99603 122 aa12.87□□□□□ -0.35
USP35-202ENST00000528910 MS4A6AQ9H2W1 248 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms