RNA–Protein interactions for RNA: ENST00000435527.6

CLOCK-203, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-203ENST00000435527 VSIRQ9H7M9 311 aa13.52□□□□□ -0.25
CLOCK-203ENST00000435527 SRD5A3Q9H8P0 318 aa13.52□□□□□ -0.25
CLOCK-203ENST00000435527 IGHV3OR16-13A0A075B7E8 117 aa13.51□□□□□ -0.25
CLOCK-203ENST00000435527 IGHV3-74A0A0B4J1X5 117 aa13.51□□□□□ -0.25
CLOCK-203ENST00000435527 ADAP1O75689 374 aa13.51□□□□□ -0.25
CLOCK-203ENST00000435527 CCDC32Q9BV29 185 aa13.51□□□□□ -0.25
CLOCK-203ENST00000435527 YPEL3P61236 119 aaPredicted RBP13.5□□□□□ -0.25
CLOCK-203ENST00000435527 OR1S2Q8NGQ3 325 aa13.5□□□□□ -0.25
CLOCK-203ENST00000435527 COQ8AQ8NI60 647 aa13.5□□□□□ -0.25
CLOCK-203ENST00000435527 ST8SIA2Q92186 375 aa13.5□□□□□ -0.25
CLOCK-203ENST00000435527 NPIPB3Q92617 1050 aa13.5□□□□□ -0.25
CLOCK-203ENST00000435527 CITED4Q96RK1 184 aa13.5□□□□□ -0.25
CLOCK-203ENST00000435527 TENM3Q9P273 2699 aa13.49□□□□□ -0.25
CLOCK-203ENST00000435527 MPTX1A8MV57 137 aa13.49□□□□□ -0.25
CLOCK-203ENST00000435527 SYNGR2O43760 224 aa13.49□□□□□ -0.25
CLOCK-203ENST00000435527 SCGB2A1O75556 95 aa13.49□□□□□ -0.25
CLOCK-203ENST00000435527 MED6O75586 246 aa13.49□□□□□ -0.25
CLOCK-203ENST00000435527 TCRBP04435 133 aa13.49□□□□□ -0.25
CLOCK-203ENST00000435527 IFNA4P05014 189 aa13.49□□□□□ -0.25
CLOCK-203ENST00000435527 IAPPP10997 89 aa13.49□□□□□ -0.25
CLOCK-203ENST00000435527 OR10J1P30954 320 aa13.49□□□□□ -0.25
CLOCK-203ENST00000435527 GPX4P36969 197 aaPredicted RBP13.49□□□□□ -0.25
CLOCK-203ENST00000435527 ID3Q02535 119 aa13.49□□□□□ -0.25
CLOCK-203ENST00000435527 C4orf46Q504U0 113 aa13.49□□□□□ -0.25
CLOCK-203ENST00000435527 S100ZQ8WXG8 99 aa13.49□□□□□ -0.25
CLOCK-203ENST00000435527 MAGT1Q9H0U3 335 aa13.49□□□□□ -0.25
CLOCK-203ENST00000435527 OR4C46A6NHA9 309 aa13.48□□□□□ -0.25
CLOCK-203ENST00000435527 NPPCP23582 126 aa13.48□□□□□ -0.25
CLOCK-203ENST00000435527 CRYBB3P26998 211 aa13.48□□□□□ -0.25
CLOCK-203ENST00000435527 ODF3L2Q3SX64 289 aa13.48□□□□□ -0.25
CLOCK-203ENST00000435527 Q8WTZ3 238 aa13.48□□□□□ -0.25
CLOCK-203ENST00000435527 MITD1Q8WV92 249 aa13.48□□□□□ -0.25
CLOCK-203ENST00000435527 ACY3Q96HD9 319 aa13.48□□□□□ -0.25
CLOCK-203ENST00000435527 SPATA25Q9BR10 227 aa13.48□□□□□ -0.25
CLOCK-203ENST00000435527 UBQLN2Q9UHD9 624 aa13.48□□□□□ -0.25
CLOCK-203ENST00000435527 IGHV3-66A0A0C4DH42 116 aa13.47□□□□□ -0.25
CLOCK-203ENST00000435527 DFFBO76075 338 aa13.47□□□□□ -0.25
CLOCK-203ENST00000435527 GAMTQ14353 236 aa13.47□□□□□ -0.25
CLOCK-203ENST00000435527 TCF24Q7RTU0 167 aa13.47□□□□□ -0.25
CLOCK-203ENST00000435527 CIB3Q96Q77 187 aaPredicted RBP13.47□□□□□ -0.25
CLOCK-203ENST00000435527 FAM110AQ9BQ89 295 aa13.47□□□□□ -0.25
CLOCK-203ENST00000435527 C20orf85Q9H1P6 137 aa13.47□□□□□ -0.25
CLOCK-203ENST00000435527 U3KQE9 123 aa13.47□□□□□ -0.25
CLOCK-203ENST00000435527 NBEAL2Q6ZNJ1 2754 aa13.46□□□□□ -0.25
CLOCK-203ENST00000435527 WRBO00258 174 aa13.46□□□□□ -0.25
CLOCK-203ENST00000435527 IFNA21P01568 189 aa13.46□□□□□ -0.25
CLOCK-203ENST00000435527 CD5P06127 495 aa13.46□□□□□ -0.25
CLOCK-203ENST00000435527 BMI1P35226 326 aa13.46□□□□□ -0.25
CLOCK-203ENST00000435527 OR4D5Q8NGN0 318 aa13.46□□□□□ -0.25
CLOCK-203ENST00000435527 METTL26Q96S19 204 aa13.46□□□□□ -0.25
CLOCK-203ENST00000435527 TBC1D24Q9ULP9 559 aa13.46□□□□□ -0.25
CLOCK-203ENST00000435527 IGKV3-7A0A075B6H7 116 aa13.45□□□□□ -0.26
CLOCK-203ENST00000435527 A0A1W2PS18 150 aa13.45□□□□□ -0.26
CLOCK-203ENST00000435527 TOMM40O96008 361 aa13.45□□□□□ -0.26
CLOCK-203ENST00000435527 TFPI2P48307 235 aa13.45□□□□□ -0.26
CLOCK-203ENST00000435527 RAB11AP62491 216 aa13.45□□□□□ -0.26
CLOCK-203ENST00000435527 GBGT1Q8N5D6 347 aa13.45□□□□□ -0.26
CLOCK-203ENST00000435527 PTTG2Q9NZH5 202 aa13.45□□□□□ -0.26
CLOCK-203ENST00000435527 IGKV1D-37A0A075B6S9 117 aa13.44□□□□□ -0.26
CLOCK-203ENST00000435527 TRAV6A0A075B6T7 132 aa13.44□□□□□ -0.26
CLOCK-203ENST00000435527 LOC102724200A0A096LPH7 203 aaPredicted RBP13.44□□□□□ -0.26
CLOCK-203ENST00000435527 PRSS46E5RG02 174 aa13.44□□□□□ -0.26
CLOCK-203ENST00000435527 RD3LP0DJH9 198 aa13.44□□□□□ -0.26
CLOCK-203ENST00000435527 POLR2GP62487 172 aaKnown RBP eCLIP13.44□□□□□ -0.26
CLOCK-203ENST00000435527 PAFAH1B2P68402 229 aa13.44□□□□□ -0.26
CLOCK-203ENST00000435527 RPP30P78346 268 aaKnown RBP13.44□□□□□ -0.26
CLOCK-203ENST00000435527 GGTLC1Q9BX51 225 aa13.44□□□□□ -0.26
CLOCK-203ENST00000435527 MS4A6AQ9H2W1 248 aa13.44□□□□□ -0.26
CLOCK-203ENST00000435527 TMEM231Q9H6L2 316 aa13.44□□□□□ -0.26
CLOCK-203ENST00000435527 PSG1P11464 419 aa13.43□□□□□ -0.26
CLOCK-203ENST00000435527 NKX2-1P43699 371 aaPredicted RBP13.43□□□□□ -0.26
CLOCK-203ENST00000435527 CMC4P56277 68 aaPredicted RBP13.43□□□□□ -0.26
CLOCK-203ENST00000435527 USF2Q15853 346 aaPredicted RBP13.43□□□□□ -0.26
CLOCK-203ENST00000435527 SLC35E1Q96K37 410 aa13.43□□□□□ -0.26
CLOCK-203ENST00000435527 EDA2RQ9HAV5 297 aa13.43□□□□□ -0.26
CLOCK-203ENST00000435527 RETNQ9HD89 108 aa13.43□□□□□ -0.26
CLOCK-203ENST00000435527 BATF3Q9NR55 127 aa13.43□□□□□ -0.26
CLOCK-203ENST00000435527 NUDT15Q9NV35 164 aa13.43□□□□□ -0.26
CLOCK-203ENST00000435527 TRAV2A0A0B4J234 112 aa13.42□□□□□ -0.26
CLOCK-203ENST00000435527 IL4P05112 153 aa13.42□□□□□ -0.26
CLOCK-203ENST00000435527 HNRNPCP07910 306 aaKnown RBP eCLIP13.42□□□□□ -0.265e-7■□□□□ 9.3
CLOCK-203ENST00000435527 H2AFB2P0C5Z0 115 aa13.42□□□□□ -0.26
CLOCK-203ENST00000435527 P2RY1P47900 373 aa13.42□□□□□ -0.26
CLOCK-203ENST00000435527 PAX9P55771 341 aa13.42□□□□□ -0.26
CLOCK-203ENST00000435527 IFITM3Q01628 133 aa13.42□□□□□ -0.26
CLOCK-203ENST00000435527 ASAH1Q13510 395 aa13.42□□□□□ -0.26
CLOCK-203ENST00000435527 ZNF846Q147U1 533 aa13.42□□□□□ -0.26
CLOCK-203ENST00000435527 IAH1Q2TAA2 248 aaPredicted RBP13.42□□□□□ -0.26
CLOCK-203ENST00000435527 SPANXN5Q5MJ07 72 aa13.42□□□□□ -0.26
CLOCK-203ENST00000435527 WFDC3Q8IUB2 231 aa13.42□□□□□ -0.26
CLOCK-203ENST00000435527 APRG1Q8IVJ8 170 aa13.42□□□□□ -0.26
CLOCK-203ENST00000435527 ZBTB8BQ8NAP8 495 aaPredicted RBP13.42□□□□□ -0.26
CLOCK-203ENST00000435527 PAIP2BQ9ULR5 123 aaKnown RBP13.42□□□□□ -0.26
CLOCK-203ENST00000435527 IGKV1OR2-108A0A075B7D4 117 aa13.41□□□□□ -0.26
CLOCK-203ENST00000435527 FAM240BA0A1B0GVZ2 78 aa13.41□□□□□ -0.26
CLOCK-203ENST00000435527 ZNF90Q03938 601 aa13.41□□□□□ -0.26
CLOCK-203ENST00000435527 MZT2BQ6NZ67 158 aa13.41□□□□□ -0.26
CLOCK-203ENST00000435527 C16orf54Q6UWD8 224 aa13.41□□□□□ -0.26
CLOCK-203ENST00000435527 THAP8Q8NA92 274 aa13.41□□□□□ -0.26
CLOCK-203ENST00000435527 ZNF431Q8TF32 576 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms