RNA–Protein interactions for RNA: ENST00000435527.6

CLOCK-203, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-203ENST00000435527 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.55■□□□□ 0.44e-25■■■■■ 255.7
CLOCK-203ENST00000435527 QKIQ96PU8 341 aaKnown RBP eCLIP18.1■□□□□ 0.495e-13■■■■□ 20.4
CLOCK-203ENST00000435527 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.8■■■□□ 2.046e-10■□□□□ 9.5
CLOCK-203ENST00000435527 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.31■□□□□ 0.041e-9■■■■■ 46.8
CLOCK-203ENST00000435527 TARDBPQ13148 414 aaKnown RBP eCLIP18■□□□□ 0.471e-9■■■■■ 39.1
CLOCK-203ENST00000435527 GTF2F1P35269 517 aaKnown RBP eCLIP19.95■□□□□ 0.782e-9■■■■■ 35.5
CLOCK-203ENST00000435527 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.79■□□□□ 0.61e-8■■■■■ 28.9
CLOCK-203ENST00000435527 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.12■□□□□ 0.013e-8■□□□□ 8.2
CLOCK-203ENST00000435527 SF3B4Q15427 424 aaKnown RBP eCLIP16.41■□□□□ 0.224e-8■■■■□ 25.4
CLOCK-203ENST00000435527 EWSR1Q01844 656 aaKnown RBP eCLIP13.23□□□□□ -0.291e-7■■■■■ 33
CLOCK-203ENST00000435527 PTBP1P26599 531 aaKnown RBP eCLIP13.9□□□□□ -0.182e-7■■■■■ 29.7
CLOCK-203ENST00000435527 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.32■□□□□ 0.682e-7■■■■■ 115.6
CLOCK-203ENST00000435527 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.93■■□□□ 1.13e-7■■■■■ 42.3
CLOCK-203ENST00000435527 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.32■■□□□ 13e-7■■■■□ 23.5
CLOCK-203ENST00000435527 GPKOWQ92917 476 aaPredicted RBP eCLIP20.87■□□□□ 0.934e-7■■□□□ 14.1
CLOCK-203ENST00000435527 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.79■□□□□ 0.64e-7■■■■■ 30.5
CLOCK-203ENST00000435527 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.91■□□□□ 0.35e-7■■■■■ 31.4
CLOCK-203ENST00000435527 PRPF4O43172 522 aaKnown RBP eCLIP17.19■□□□□ 0.345e-7■■■■□ 25.4
CLOCK-203ENST00000435527 HNRNPCP07910 306 aaKnown RBP eCLIP13.42□□□□□ -0.265e-7■□□□□ 9.3
CLOCK-203ENST00000435527 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.34□□□□□ -0.116e-7■■■■□ 25.9
CLOCK-203ENST00000435527 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.6■■□□□ 1.537e-7■■■■□ 19.5
CLOCK-203ENST00000435527 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.51■□□□□ 0.719e-7■■■■■ 31.8
CLOCK-203ENST00000435527 PCBP2Q15366 365 aaKnown RBP eCLIP17.09■□□□□ 0.339e-7■■■■■ 34.6
CLOCK-203ENST00000435527 NONOQ15233 471 aaKnown RBP eCLIP20.55■□□□□ 0.881e-6■■■■□ 20.1
CLOCK-203ENST00000435527 FUSP35637 526 aaKnown RBP eCLIP12.07□□□□□ -0.481e-6■□□□□ 11.3
CLOCK-203ENST00000435527 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.15■■■□□ 2.261e-6■■■■■ 32.5
CLOCK-203ENST00000435527 HNRNPMP52272 730 aaKnown RBP eCLIP28.59■■■□□ 2.171e-6■■■■□ 23.2
CLOCK-203ENST00000435527 KHSRPQ92945 711 aaKnown RBP eCLIP19.7■□□□□ 0.741e-6■■■□□ 16.4
CLOCK-203ENST00000435527 LARP4Q71RC2 724 aaKnown RBP eCLIP16.56■□□□□ 0.241e-6■■□□□ 13.8
CLOCK-203ENST00000435527 ZRANB2O95218 330 aaKnown RBP eCLIP18.21■□□□□ 0.511e-6■■■■□ 23.3
CLOCK-203ENST00000435527 TIA1P31483 386 aaKnown RBP eCLIP16.77■□□□□ 0.281e-6■■■■□ 22.9
CLOCK-203ENST00000435527 FMR1Q06787 632 aaKnown RBP eCLIP22.63■■□□□ 1.212e-6■■□□□ 12.9
CLOCK-203ENST00000435527 SF3B1O75533 1304 aaKnown RBP eCLIP19.76■□□□□ 0.752e-6■■■■■ 91.7
CLOCK-203ENST00000435527 U2AF2P26368 475 aaKnown RBP eCLIP20.36■□□□□ 0.853e-6■■■■■ 26.9
CLOCK-203ENST00000435527 SAFB2Q14151 953 aaKnown RBP eCLIP26.17■■□□□ 1.784e-6■□□□□ 10.7
CLOCK-203ENST00000435527 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.56■■□□□ 1.045e-6■□□□□ 9.7
CLOCK-203ENST00000435527 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.29■■□□□ 16e-6■□□□□ 8.9
CLOCK-203ENST00000435527 ILF3Q12906 894 aaKnown RBP eCLIP17.97■□□□□ 0.477e-6■■■■□ 19.8
Retrieved 38 of 38 RNA–protein pairs in 9.8 ms