RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 GCHFRP30047 84 aa9.66□□□□□ -0.86
LDLRAD3-201ENST00000315571 ARL17AQ8IVW1 177 aa9.66□□□□□ -0.86
LDLRAD3-201ENST00000315571 NDFIP1Q9BT67 221 aa9.66□□□□□ -0.86
LDLRAD3-201ENST00000315571 SCRT2Q9NQ03 307 aa9.66□□□□□ -0.86
LDLRAD3-201ENST00000315571 V9GYV3 84 aa9.66□□□□□ -0.86
LDLRAD3-201ENST00000315571 TRGV10A0A0A0MS01 117 aa9.65□□□□□ -0.86
LDLRAD3-201ENST00000315571 TRAV5A0A0B4J249 113 aa9.65□□□□□ -0.86
LDLRAD3-201ENST00000315571 C2orf70A6NJV1 201 aa9.65□□□□□ -0.86
LDLRAD3-201ENST00000315571 SYNGR1O43759 233 aa9.65□□□□□ -0.86
LDLRAD3-201ENST00000315571 KIR2DL2P43627 348 aaPredicted RBP9.65□□□□□ -0.86
LDLRAD3-201ENST00000315571 RBMXL3Q8N7X1 1067 aaKnown RBP9.65□□□□□ -0.86
LDLRAD3-201ENST00000315571 ZNF611Q8N823 705 aa9.65□□□□□ -0.86
LDLRAD3-201ENST00000315571 DEFB127Q9H1M4 99 aa9.65□□□□□ -0.86
LDLRAD3-201ENST00000315571 C11orf1Q9H5F2 150 aa9.65□□□□□ -0.86
LDLRAD3-201ENST00000315571 TMEM140Q9NV12 185 aa9.65□□□□□ -0.86
LDLRAD3-201ENST00000315571 LOC389332A0A1B0GUA5 103 aa9.65□□□□□ -0.86
LDLRAD3-201ENST00000315571 FKBP2P26885 142 aaKnown RBP9.65□□□□□ -0.86
LDLRAD3-201ENST00000315571 KCNK17Q96T54 332 aa9.65□□□□□ -0.86
LDLRAD3-201ENST00000315571 OR2W1Q9Y3N9 320 aa9.65□□□□□ -0.86
LDLRAD3-201ENST00000315571 FAM90A27PA6NNH2 459 aa9.65□□□□□ -0.87
LDLRAD3-201ENST00000315571 A8MWL6 223 aa9.65□□□□□ -0.87
LDLRAD3-201ENST00000315571 MT-ATP8P03928 68 aa9.65□□□□□ -0.87
LDLRAD3-201ENST00000315571 VDAC2P45880 294 aaPredicted RBP9.65□□□□□ -0.87
LDLRAD3-201ENST00000315571 C3orf56Q8N813 242 aa9.65□□□□□ -0.87
LDLRAD3-201ENST00000315571 TEX45Q8NA69 505 aa9.65□□□□□ -0.87
LDLRAD3-201ENST00000315571 OR10X1Q8NGY0 326 aa9.65□□□□□ -0.87
LDLRAD3-201ENST00000315571 TPRP12270 2363 aaKnown RBP9.64□□□□□ -0.87
LDLRAD3-201ENST00000315571 ENY2Q9NPA8 101 aa9.64□□□□□ -0.87
LDLRAD3-201ENST00000315571 JPT1Q9UK76 154 aa9.64□□□□□ -0.87
LDLRAD3-201ENST00000315571 CACNA1GO43497 2377 aa9.64□□□□□ -0.87
LDLRAD3-201ENST00000315571 DMXL2Q8TDJ6 3036 aa9.64□□□□□ -0.87
LDLRAD3-201ENST00000315571 GAGE12JA6NER3 117 aa9.64□□□□□ -0.87
LDLRAD3-201ENST00000315571 K7EMI3 77 aa9.64□□□□□ -0.87
LDLRAD3-201ENST00000315571 GAGE7O76087 117 aa9.64□□□□□ -0.87
LDLRAD3-201ENST00000315571 IGHV3-7P01780 117 aa9.64□□□□□ -0.87
LDLRAD3-201ENST00000315571 GAGE12FP0CL80 117 aa9.64□□□□□ -0.87
LDLRAD3-201ENST00000315571 GAGE12GP0CL81 117 aa9.64□□□□□ -0.87
LDLRAD3-201ENST00000315571 GAGE12IP0CL82 117 aa9.64□□□□□ -0.87
LDLRAD3-201ENST00000315571 GAGE4Q13068 117 aa9.64□□□□□ -0.87
LDLRAD3-201ENST00000315571 PGPEP1Q9NXJ5 209 aa9.64□□□□□ -0.87
LDLRAD3-201ENST00000315571 LRRC30A6NM36 301 aa9.64□□□□□ -0.87
LDLRAD3-201ENST00000315571 HIGD1CA8MV81 97 aa9.64□□□□□ -0.87
LDLRAD3-201ENST00000315571 MS4A18H0YCH9 400 aa9.64□□□□□ -0.87
LDLRAD3-201ENST00000315571 EFNA2O43921 213 aa9.64□□□□□ -0.87
LDLRAD3-201ENST00000315571 CCL2P13500 99 aa9.64□□□□□ -0.87
LDLRAD3-201ENST00000315571 MS4A18Q3C1V0 323 aa9.64□□□□□ -0.87
LDLRAD3-201ENST00000315571 PPP1R35Q8TAP8 253 aa9.64□□□□□ -0.87
LDLRAD3-201ENST00000315571 PKIBQ9C010 78 aa9.64□□□□□ -0.87
LDLRAD3-201ENST00000315571 F8W1H4 67 aa9.63□□□□□ -0.87
LDLRAD3-201ENST00000315571 GAGE2BQ13066 116 aa9.63□□□□□ -0.87
LDLRAD3-201ENST00000315571 GAGE2EQ4V326 116 aa9.63□□□□□ -0.87
LDLRAD3-201ENST00000315571 RNFT1Q5M7Z0 435 aa9.63□□□□□ -0.87
LDLRAD3-201ENST00000315571 ZNF562Q6V9R5 426 aa9.63□□□□□ -0.87
LDLRAD3-201ENST00000315571 LCNL1Q6ZST4 164 aa9.63□□□□□ -0.87
LDLRAD3-201ENST00000315571 PRORYQ9H606 182 aa9.63□□□□□ -0.87
LDLRAD3-201ENST00000315571 GAGE2DQ9UEU5 116 aa9.63□□□□□ -0.87
LDLRAD3-201ENST00000315571 SOX21Q9Y651 276 aaPredicted RBP9.63□□□□□ -0.87
LDLRAD3-201ENST00000315571 TRGV5A0A0B4J1U4 118 aa9.63□□□□□ -0.87
LDLRAD3-201ENST00000315571 PRSS29PA6NIE9 313 aa9.63□□□□□ -0.87
LDLRAD3-201ENST00000315571 RRHO14718 337 aa9.63□□□□□ -0.87
LDLRAD3-201ENST00000315571 OR4X2Q8NGF9 303 aa9.63□□□□□ -0.87
LDLRAD3-201ENST00000315571 PGLYRP4Q96LB8 373 aa9.63□□□□□ -0.87
LDLRAD3-201ENST00000315571 AP5S1Q9NUS5 200 aa9.63□□□□□ -0.87
LDLRAD3-201ENST00000315571 ACACBO00763 2458 aa9.63□□□□□ -0.87
LDLRAD3-201ENST00000315571 SNCGO76070 127 aa9.63□□□□□ -0.87
LDLRAD3-201ENST00000315571 INSL3P51460 131 aa9.63□□□□□ -0.87
LDLRAD3-201ENST00000315571 B3GALT5-AS1P59052 145 aa9.63□□□□□ -0.87
LDLRAD3-201ENST00000315571 WFDC3Q8IUB2 231 aa9.63□□□□□ -0.87
LDLRAD3-201ENST00000315571 GGTLC1Q9BX51 225 aa9.63□□□□□ -0.87
LDLRAD3-201ENST00000315571 OSTCQ9NRP0 149 aa9.63□□□□□ -0.87
LDLRAD3-201ENST00000315571 INSIG2Q9Y5U4 225 aa9.63□□□□□ -0.87
LDLRAD3-201ENST00000315571 EML6Q6ZMW3 1958 aa9.62□□□□□ -0.87
LDLRAD3-201ENST00000315571 IGHV1-24A0A0C4DH33 117 aa9.62□□□□□ -0.87
LDLRAD3-201ENST00000315571 BCL3P20749 454 aa9.62□□□□□ -0.87
LDLRAD3-201ENST00000315571 GNG3P63215 75 aa9.62□□□□□ -0.87
LDLRAD3-201ENST00000315571 SP5Q6BEB4 398 aaPredicted RBP9.62□□□□□ -0.87
LDLRAD3-201ENST00000315571 HSD17B10Q99714 261 aaKnown RBP9.62□□□□□ -0.87
LDLRAD3-201ENST00000315571 SRYQ05066 204 aa9.62□□□□□ -0.87
LDLRAD3-201ENST00000315571 OR5AN1Q8NGI8 311 aa9.62□□□□□ -0.87
LDLRAD3-201ENST00000315571 ERG28Q9UKR5 140 aa9.62□□□□□ -0.87
LDLRAD3-201ENST00000315571 ALKBH4Q9NXW9 302 aa9.62□□□□□ -0.87
LDLRAD3-201ENST00000315571 USF3Q68DE3 2245 aa9.62□□□□□ -0.87
LDLRAD3-201ENST00000315571 LIPT2A6NK58 231 aa9.61□□□□□ -0.87
LDLRAD3-201ENST00000315571 TNFSF11O14788 317 aa9.61□□□□□ -0.87
LDLRAD3-201ENST00000315571 PATE4P0C8F1 98 aa9.61□□□□□ -0.87
LDLRAD3-201ENST00000315571 TAAR6Q96RI8 345 aa9.61□□□□□ -0.87
LDLRAD3-201ENST00000315571 IGHV3-64DA0A0J9YX35 117 aa9.61□□□□□ -0.87
LDLRAD3-201ENST00000315571 TGFAP01135 160 aa9.61□□□□□ -0.87
LDLRAD3-201ENST00000315571 OR9G9P0C7N8 305 aa9.61□□□□□ -0.87
LDLRAD3-201ENST00000315571 A0A0J9YW62 118 aa9.61□□□□□ -0.87
LDLRAD3-201ENST00000315571 APOHP02749 345 aaPredicted RBP9.61□□□□□ -0.87
LDLRAD3-201ENST00000315571 LYZL4Q96KX0 146 aa9.61□□□□□ -0.87
LDLRAD3-201ENST00000315571 ABCA1O95477 2261 aa9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 SVILO95425 2214 aa9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 MGAQ8IWI9 3026 aa9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 E9PLN8 166 aa9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 IGKV1-5P01602 117 aa9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 CACNG7P62955 275 aa9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 TMUB1Q9BVT8 246 aa9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 SPANXB1Q9NS25 103 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms