RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 BRS3P32247 399 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 OR1B1Q8NGR6 318 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 OR2T6Q8NHC8 308 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 KLF2Q9Y5W3 355 aaPredicted RBP4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 IGLV3-9A0A075B6K5 115 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 HIST1H1EP10412 219 aaKnown RBP4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 HTR1DP28221 377 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 GPX4P36969 197 aaPredicted RBP4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 ZNF134P52741 427 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 KRTAP27-1Q3LI81 207 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 HIST3H2BBQ8N257 126 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 OR2D3Q8NGH3 330 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 SFRP2Q96HF1 295 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 NOL4LQ96MY1 436 aaPredicted RBP4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 IMMP2LQ96T52 175 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 ANAPC13Q9BS18 74 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 RAB1BQ9H0U4 201 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 ZNF257Q9Y2Q1 563 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 ARHGAP32A7KAX9 2087 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 TRAV34A0A0B4J273 112 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 LYNX1G3V0Z9 82 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 SLC31A2O15432 143 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 IGHV2-5P01817 119 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 LYNX1P0DP58 116 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 ADIPOQQ15848 244 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 MLANAQ16655 118 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 MBNL2Q5VZF2 373 aaKnown RBP4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 FAM169BQ8N8A8 192 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 SPATA25Q9BR10 227 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 VAMP8Q9BV40 100 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 VCANP13611 3396 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 IGHV1-69-2A0A0G2JMI3 117 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 DLL1O00548 723 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 MOSP00540 346 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 DAZAP2Q15038 168 aaPredicted RBP4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 AARDQ4LEZ3 155 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 OR4F17Q8NGA8 305 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 PERPQ96FX8 193 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 RASL11BQ9BPW5 248 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 FLNAP21333 2647 aaKnown RBP4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 NOTCH1P46531 2555 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 A0A1W2PRE2 83 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 NCBP2LA6PVI3 153 aaKnown RBP4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 HSBP1L1C9JCN9 74 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 SOD3P08294 240 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 KLHDC1Q8N7A1 406 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 OR10W1Q8NGF6 305 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 DPH3P1Q9H4G8 78 aa4.64□□□□□ -1.67
SYNCRIP-204ENST00000616122 PPIAL4CA0A0B4J2A2 164 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 IGHV3-35A0A0C4DH35 117 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 CORTO00230 105 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 REG1AP05451 166 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 CSN3P07498 182 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 PPIAL4GP0DN37 164 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 RAB4AP20338 218 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 SRP14P37108 136 aaKnown RBP4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 ID1P41134 155 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 PPOXP50336 477 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 PKIAP61925 76 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 LINC01560Q8TB33 94 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 SLC25A33Q9BSK2 321 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 SCRT1Q9BWW7 348 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 FBXL15Q9H469 300 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 HILPDAQ9Y5L2 63 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 B9A039 149 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 F2RL2O00254 374 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 GGCTO75223 188 aaKnown RBP4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 GCGP01275 180 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 VDAC2P45880 294 aaPredicted RBP4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 JOSD1Q15040 202 aaPredicted RBP4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 RPEL1Q2QD12 228 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 BPIFA4PQ86YQ2 179 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 UBR5O95071 2799 aaPredicted RBP4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 MMP23AO75900 390 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 AMBPP02760 352 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 MSMPQ1L6U9 139 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 Q1RN00 199 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 LINC00469Q8N7U9 141 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 VN1R17PQ8TDU5 208 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 EAF1Q96JC9 268 aaPredicted RBP4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 C1RLQ9NZP8 487 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 FAM90A9PA6NNJ1 464 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 GPR6P46095 362 aaPredicted RBP4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 FOXA3P55318 350 aaPredicted RBP4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 ASCL5Q7RTU5 278 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 DPM3Q9P2X0 92 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 FRYQ5TBA9 3013 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 TRBV20OR9-2A0A075B6H5 130 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 C15orf65H3BRN8 121 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 M0R143 59 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 P01737 135 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 RPL7P18124 248 aaKnown RBP4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 SRIP30626 198 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 SPATA31B1PQ5VZV4 182 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 NHLRC2Q8NBF2 726 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 SRSF12Q8WXF0 261 aaKnown RBP4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 CLEC7AQ9BXN2 247 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 ONECUT1Q9UBC0 465 aa4.63□□□□□ -1.67
SYNCRIP-204ENST00000616122 EML5Q05BV3 1969 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 FAM162BQ5T6X4 162 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms