RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 PKD1L2Q7Z442 2459 aa10.43□□□□□ -0.74
SEC13-216ENST00000479868 PSMB11A5LHX3 300 aa10.43□□□□□ -0.74
SEC13-216ENST00000479868 AREGP15514 252 aa10.43□□□□□ -0.74
SEC13-216ENST00000479868 MFAP2P55001 183 aa10.43□□□□□ -0.74
SEC13-216ENST00000479868 ANAPC16Q96DE5 110 aa10.43□□□□□ -0.74
SEC13-216ENST00000479868 TECRQ9NZ01 308 aaKnown RBP10.43□□□□□ -0.74
SEC13-216ENST00000479868 IGKV1D-37A0A075B6S9 117 aa10.43□□□□□ -0.74
SEC13-216ENST00000479868 RPL27AP46776 148 aaKnown RBP10.43□□□□□ -0.74
SEC13-216ENST00000479868 UQCRFS1P47985 274 aa10.43□□□□□ -0.74
SEC13-216ENST00000479868 ZNF90Q03938 601 aa10.43□□□□□ -0.74
SEC13-216ENST00000479868 CLEC12BQ2HXU8 276 aa10.43□□□□□ -0.74
SEC13-216ENST00000479868 MORN5Q5VZ52 161 aa10.43□□□□□ -0.74
SEC13-216ENST00000479868 DTX2Q86UW9 622 aa10.43□□□□□ -0.74
SEC13-216ENST00000479868 NEU4Q8WWR8 484 aaPredicted RBP10.43□□□□□ -0.74
SEC13-216ENST00000479868 AMMECR1Q9Y4X0 333 aaPredicted RBP10.43□□□□□ -0.74
SEC13-216ENST00000479868 PHOX2AO14813 284 aa10.42□□□□□ -0.74
SEC13-216ENST00000479868 OR7C2O60412 319 aa10.42□□□□□ -0.74
SEC13-216ENST00000479868 OR10J4P0C629 311 aa10.42□□□□□ -0.74
SEC13-216ENST00000479868 COMPP49747 757 aaPredicted RBP10.42□□□□□ -0.74
SEC13-216ENST00000479868 MEOX2P50222 304 aa10.42□□□□□ -0.74
SEC13-216ENST00000479868 PPP1R27Q86WC6 154 aa10.42□□□□□ -0.74
SEC13-216ENST00000479868 FRZBQ92765 325 aa10.42□□□□□ -0.74
SEC13-216ENST00000479868 OR5B12Q96R08 314 aa10.42□□□□□ -0.74
SEC13-216ENST00000479868 PYGO2Q9BRQ0 406 aa10.42□□□□□ -0.74
SEC13-216ENST00000479868 SLC25A33Q9BSK2 321 aa10.42□□□□□ -0.74
SEC13-216ENST00000479868 C19orf24Q9BVV8 132 aa10.42□□□□□ -0.74
SEC13-216ENST00000479868 FBXL15Q9H469 300 aa10.42□□□□□ -0.74
SEC13-216ENST00000479868 CHODLQ9H9P2 273 aa10.42□□□□□ -0.74
SEC13-216ENST00000479868 ABCA1O95477 2261 aa10.42□□□□□ -0.74
SEC13-216ENST00000479868 SVEP1Q4LDE5 3571 aa10.42□□□□□ -0.74
SEC13-216ENST00000479868 CDKN1AP38936 164 aa10.41□□□□□ -0.74
SEC13-216ENST00000479868 LGALS4P56470 323 aa10.41□□□□□ -0.74
SEC13-216ENST00000479868 NDUFA6P56556 154 aa10.41□□□□□ -0.74
SEC13-216ENST00000479868 IGFBPL1Q8WX77 278 aa10.41□□□□□ -0.74
SEC13-216ENST00000479868 SSBP3Q9BWW4 388 aaPredicted RBP10.41□□□□□ -0.74
SEC13-216ENST00000479868 CSMD1Q96PZ7 3565 aa10.41□□□□□ -0.74
SEC13-216ENST00000479868 TRAV5A0A0B4J249 113 aa10.41□□□□□ -0.74
SEC13-216ENST00000479868 A0A1W2PPQ1 181 aa10.41□□□□□ -0.74
SEC13-216ENST00000479868 NDUFS7O75251 213 aa10.41□□□□□ -0.74
SEC13-216ENST00000479868 TRGC1P0CF51 173 aa10.41□□□□□ -0.74
SEC13-216ENST00000479868 HNF1AP20823 631 aa10.41□□□□□ -0.74
SEC13-216ENST00000479868 S100PP25815 95 aa10.41□□□□□ -0.74
SEC13-216ENST00000479868 KLRD1Q13241 179 aa10.41□□□□□ -0.74
SEC13-216ENST00000479868 C4orf17Q53FE4 359 aa10.41□□□□□ -0.74
SEC13-216ENST00000479868 PQLC2Q6ZP29 291 aa10.41□□□□□ -0.74
SEC13-216ENST00000479868 MISP3Q96FF7 219 aa10.41□□□□□ -0.74
SEC13-216ENST00000479868 TMEM167BQ9NRX6 74 aa10.41□□□□□ -0.74
SEC13-216ENST00000479868 AKAP6Q13023 2319 aa10.41□□□□□ -0.74
SEC13-216ENST00000479868 CACNA1AO00555 2505 aa10.41□□□□□ -0.74
SEC13-216ENST00000479868 LOC105371242A0A075B767 164 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 TCRBV4S1A1TA0A5B7 111 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 FCN1O00602 326 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 TIMM23O14925 209 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 C8orf88P0DMB2 117 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 PVRIGQ6DKI7 326 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 MED13LQ71F56 2210 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 THAP8Q8NA92 274 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 OCC1Q8TAD7 63 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 C11orf52Q96A22 123 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 SLC25A2Q9BXI2 301 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 DNAJC4Q9NNZ3 241 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 WNK2Q9Y3S1 2297 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 TEX22C9J3V5 150 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 HOXA5P20719 270 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 TAS2R45P59539 299 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 TPTE2P1Q5T6R2 138 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 PATE2Q6UY27 113 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 LHFPL4Q7Z7J7 247 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 OR11H6Q8NGC7 330 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 FAM167A-AS1Q96KT0 104 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 UHRF2Q96PU4 802 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 SRD5A3Q9H8P0 318 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 HILPDAQ9Y5L2 63 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 ARL2-SNX15V9GYD0 113 aa10.4□□□□□ -0.74
SEC13-216ENST00000479868 IGHV3-21A0A0B4J1V1 117 aa10.39□□□□□ -0.75
SEC13-216ENST00000479868 TGOLN2O43493 480 aa10.39□□□□□ -0.75
SEC13-216ENST00000479868 S100A8P05109 93 aa10.39□□□□□ -0.75
SEC13-216ENST00000479868 CRYGCP07315 174 aa10.39□□□□□ -0.75
SEC13-216ENST00000479868 CD99P14209 185 aa10.39□□□□□ -0.75
SEC13-216ENST00000479868 HTR1DP28221 377 aa10.39□□□□□ -0.75
SEC13-216ENST00000479868 ITLN2Q8WWU7 325 aaPredicted RBP10.39□□□□□ -0.75
SEC13-216ENST00000479868 SFRP2Q96HF1 295 aa10.39□□□□□ -0.75
SEC13-216ENST00000479868 MRPL32Q9BYC8 188 aaKnown RBP10.39□□□□□ -0.75
SEC13-216ENST00000479868 IFITM10A6NMD0 228 aa10.39□□□□□ -0.75
SEC13-216ENST00000479868 GGTLC3B5MD39 225 aa10.39□□□□□ -0.75
SEC13-216ENST00000479868 K7EN84 100 aa10.39□□□□□ -0.75
SEC13-216ENST00000479868 MOSP00540 346 aa10.39□□□□□ -0.75
SEC13-216ENST00000479868 FAM3BP58499 235 aaPredicted RBP10.39□□□□□ -0.75
SEC13-216ENST00000479868 MRPL41Q8IXM3 137 aaKnown RBP10.39□□□□□ -0.75
SEC13-216ENST00000479868 DPM3Q9P2X0 92 aa10.39□□□□□ -0.75
SEC13-216ENST00000479868 DMRT1Q9Y5R6 373 aa10.39□□□□□ -0.75
SEC13-216ENST00000479868 A0A1W2PRD5 423 aa10.38□□□□□ -0.75
SEC13-216ENST00000479868 A0A1W2PRF3 423 aa10.38□□□□□ -0.75
SEC13-216ENST00000479868 A0A1W2PRM7 423 aa10.38□□□□□ -0.75
SEC13-216ENST00000479868 M0R1W7 72 aa10.38□□□□□ -0.75
SEC13-216ENST00000479868 COX7A2P2O60397 106 aa10.38□□□□□ -0.75
SEC13-216ENST00000479868 GGCTO75223 188 aaKnown RBP10.38□□□□□ -0.75
SEC13-216ENST00000479868 GNLYP22749 145 aa10.38□□□□□ -0.75
SEC13-216ENST00000479868 CRYBB3P26998 211 aa10.38□□□□□ -0.75
SEC13-216ENST00000479868 SRP14P37108 136 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms