RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 OR4A5Q8NH83 315 aa18.23■□□□□ 0.51
LDB1-201ENST00000361198 ZNF430Q9H8G1 570 aaPredicted RBP18.23■□□□□ 0.51
LDB1-201ENST00000361198 SLC45A2Q9UMX9 530 aa18.23■□□□□ 0.51
LDB1-201ENST00000361198 ITPR1Q14643 2758 aa18.23■□□□□ 0.51
LDB1-201ENST00000361198 A8MWP6 167 aa18.23■□□□□ 0.51
LDB1-201ENST00000361198 FOXH1O75593 365 aa18.23■□□□□ 0.51
LDB1-201ENST00000361198 MC5RP33032 325 aa18.23■□□□□ 0.51
LDB1-201ENST00000361198 SLC25A17O43808 307 aa18.22■□□□□ 0.51
LDB1-201ENST00000361198 IGLV1-47P01700 117 aa18.22■□□□□ 0.51
LDB1-201ENST00000361198 OR4P4Q8NGL7 312 aa18.22■□□□□ 0.51
LDB1-201ENST00000361198 NOL4LQ96MY1 436 aaPredicted RBP18.22■□□□□ 0.51
LDB1-201ENST00000361198 PPIAL4CA0A0B4J2A2 164 aa18.21■□□□□ 0.51
LDB1-201ENST00000361198 K7EN84 100 aa18.21■□□□□ 0.51
LDB1-201ENST00000361198 PPIAL4GP0DN37 164 aa18.21■□□□□ 0.51
LDB1-201ENST00000361198 ERHP84090 104 aaKnown RBP18.21■□□□□ 0.51
LDB1-201ENST00000361198 HLA-DRB5Q30154 266 aa18.21■□□□□ 0.51
LDB1-201ENST00000361198 UHRF2Q96PU4 802 aa18.21■□□□□ 0.51
LDB1-201ENST00000361198 TPSG1Q9NRR2 321 aa18.21■□□□□ 0.51
LDB1-201ENST00000361198 ENSAO43768 121 aaKnown RBP18.21■□□□□ 0.51
LDB1-201ENST00000361198 WT1-ASQ06250 92 aa18.21■□□□□ 0.51
LDB1-201ENST00000361198 TNFRSF14Q92956 283 aa18.21■□□□□ 0.51
LDB1-201ENST00000361198 RAB1BQ9H0U4 201 aa18.21■□□□□ 0.51
LDB1-201ENST00000361198 INS-IGF2F8WCM5 200 aa18.2■□□□□ 0.5
LDB1-201ENST00000361198 CD69Q07108 199 aa18.2■□□□□ 0.5
LDB1-201ENST00000361198 IL36BQ9NZH7 164 aa18.2■□□□□ 0.5
LDB1-201ENST00000361198 MIR17HGQ75NE6 70 aa18.2■□□□□ 0.5
LDB1-201ENST00000361198 CBLN4Q9NTU7 201 aa18.2■□□□□ 0.5
LDB1-201ENST00000361198 ARHGAP32A7KAX9 2087 aa18.2■□□□□ 0.5
LDB1-201ENST00000361198 A0A1W2PN81 502 aa18.19■□□□□ 0.5
LDB1-201ENST00000361198 GATA2P23769 480 aaPredicted RBP18.19■□□□□ 0.5
LDB1-201ENST00000361198 PRRX1P54821 245 aa18.19■□□□□ 0.5
LDB1-201ENST00000361198 MRGPRG-AS1Q2M3A8 158 aa18.19■□□□□ 0.5
LDB1-201ENST00000361198 VMA21Q3ZAQ7 101 aa18.19■□□□□ 0.5
LDB1-201ENST00000361198 MRPL41Q8IXM3 137 aaKnown RBP18.19■□□□□ 0.5
LDB1-201ENST00000361198 EAF1Q96JC9 268 aaPredicted RBP18.19■□□□□ 0.5
LDB1-201ENST00000361198 SELENOTP62341 195 aa18.19■□□□□ 0.5
LDB1-201ENST00000361198 OR8B3Q8NGG8 313 aa18.19■□□□□ 0.5
LDB1-201ENST00000361198 OR8B2Q96RD0 313 aa18.19■□□□□ 0.5
LDB1-201ENST00000361198 CLEC7AQ9BXN2 247 aa18.19■□□□□ 0.5
LDB1-201ENST00000361198 ZNF705GA8MUZ8 300 aaPredicted RBP18.18■□□□□ 0.5
LDB1-201ENST00000361198 BUB1B-PAK6H3BSN5 160 aa18.18■□□□□ 0.5
LDB1-201ENST00000361198 DLL1O00548 723 aa18.18■□□□□ 0.5
LDB1-201ENST00000361198 OR10J1P30954 320 aa18.18■□□□□ 0.5
LDB1-201ENST00000361198 LGALS7P47929 136 aa18.18■□□□□ 0.5
LDB1-201ENST00000361198 C11orf71Q6IPW1 123 aa18.18■□□□□ 0.5
LDB1-201ENST00000361198 ZNF600Q6ZNG1 722 aa18.18■□□□□ 0.5
LDB1-201ENST00000361198 TMEM167BQ9NRX6 74 aa18.18■□□□□ 0.5
LDB1-201ENST00000361198 ACTL6BO94805 426 aa18.18■□□□□ 0.5
LDB1-201ENST00000361198 HNF1AP20823 631 aa18.18■□□□□ 0.5
LDB1-201ENST00000361198 COX7A1P24310 79 aa18.18■□□□□ 0.5
LDB1-201ENST00000361198 ADMP35318 185 aa18.18■□□□□ 0.5
LDB1-201ENST00000361198 IQCJQ1A5X6 159 aa18.18■□□□□ 0.5
LDB1-201ENST00000361198 TMEM256Q8N2U0 113 aa18.18■□□□□ 0.5
LDB1-201ENST00000361198 PNKDQ8N490 385 aa18.18■□□□□ 0.5
LDB1-201ENST00000361198 C8orf46Q8TAG6 207 aa18.18■□□□□ 0.5
LDB1-201ENST00000361198 SLC35E1Q96K37 410 aa18.18■□□□□ 0.5
LDB1-201ENST00000361198 OR2T6Q8NHC8 308 aa18.17■□□□□ 0.5
LDB1-201ENST00000361198 C19orf24Q9BVV8 132 aa18.17■□□□□ 0.5
LDB1-201ENST00000361198 PRORYQ9H606 182 aa18.17■□□□□ 0.5
LDB1-201ENST00000361198 CNTFRP26992 372 aa18.16■□□□□ 0.5
LDB1-201ENST00000361198 ZNF90Q03938 601 aa18.16■□□□□ 0.5
LDB1-201ENST00000361198 BEND2Q8NDZ0 799 aa18.16■□□□□ 0.5
LDB1-201ENST00000361198 INSIG2Q9Y5U4 225 aa18.16■□□□□ 0.5
LDB1-201ENST00000361198 IGHV1-3A0A0C4DH29 117 aa18.16■□□□□ 0.5
LDB1-201ENST00000361198 C22orf46C9J442 243 aa18.16■□□□□ 0.5
LDB1-201ENST00000361198 PSG5Q15238 335 aa18.16■□□□□ 0.5
LDB1-201ENST00000361198 LBHQ53QV2 105 aaPredicted RBP18.16■□□□□ 0.5
LDB1-201ENST00000361198 CACNG8Q8WXS5 425 aa18.16■□□□□ 0.5
LDB1-201ENST00000361198 ZNF503Q96F45 646 aa18.16■□□□□ 0.5
LDB1-201ENST00000361198 NDUFAF3Q9BU61 184 aa18.16■□□□□ 0.5
LDB1-201ENST00000361198 TECRQ9NZ01 308 aaKnown RBP18.16■□□□□ 0.5
LDB1-201ENST00000361198 A0A1W2PPI3 338 aa18.15■□□□□ 0.5
LDB1-201ENST00000361198 NUPR1O60356 82 aa18.15■□□□□ 0.5
LDB1-201ENST00000361198 RBP4P02753 201 aa18.15■□□□□ 0.5
LDB1-201ENST00000361198 LGALS4P56470 323 aa18.15■□□□□ 0.5
LDB1-201ENST00000361198 PQLC2Q6ZP29 291 aa18.15■□□□□ 0.5
LDB1-201ENST00000361198 FNDC4Q9H6D8 234 aaPredicted RBP18.15■□□□□ 0.5
LDB1-201ENST00000361198 PIEZO1Q92508 2521 aa18.15■□□□□ 0.5
LDB1-201ENST00000361198 SLC17A3O00476 420 aa18.15■□□□□ 0.5
LDB1-201ENST00000361198 RAB4BP61018 213 aa18.15■□□□□ 0.5
LDB1-201ENST00000361198 ONECUT1Q9UBC0 465 aa18.15■□□□□ 0.5
LDB1-201ENST00000361198 A0A1B0GUS0 222 aa18.14■□□□□ 0.49
LDB1-201ENST00000361198 OR5G3P0C626 314 aa18.14■□□□□ 0.49
LDB1-201ENST00000361198 OR10J4P0C629 311 aa18.14■□□□□ 0.49
LDB1-201ENST00000361198 LY6G5BQ8NDX9 201 aa18.14■□□□□ 0.49
LDB1-201ENST00000361198 V9GYV3 84 aa18.14■□□□□ 0.49
LDB1-201ENST00000361198 REG1AP05451 166 aa18.14■□□□□ 0.49
LDB1-201ENST00000361198 SSX2Q16385 188 aa18.14■□□□□ 0.49
LDB1-201ENST00000361198 TEX45Q8NA69 505 aa18.14■□□□□ 0.49
LDB1-201ENST00000361198 HELTA6NFD8 242 aa18.13■□□□□ 0.49
LDB1-201ENST00000361198 LIPFP07098 398 aa18.13■□□□□ 0.49
LDB1-201ENST00000361198 TIMD4Q96H15 378 aa18.13■□□□□ 0.49
LDB1-201ENST00000361198 A0A1W2PPR1 153 aa18.12■□□□□ 0.49
LDB1-201ENST00000361198 ESDP10768 282 aa18.12■□□□□ 0.49
LDB1-201ENST00000361198 CBLN1P23435 193 aa18.12■□□□□ 0.49
LDB1-201ENST00000361198 SSBP2P81877 361 aaPredicted RBP18.12■□□□□ 0.49
LDB1-201ENST00000361198 TP53TG3Q9ULZ0 132 aa18.12■□□□□ 0.49
LDB1-201ENST00000361198 IGHV3-48P01763 117 aa18.12■□□□□ 0.49
LDB1-201ENST00000361198 CRYGBP07316 175 aa18.12■□□□□ 0.49
LDB1-201ENST00000361198 SUB1P53999 127 aaKnown RBP eCLIP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms