RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Q80W69 301 aa19.1■□□□□ 0.65
Upf3a-201ENSMUST00000043767 PhyhiplQ8BGT8 375 aa19.1■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Olfr1297Q8VGE8 312 aa19.1■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Tpsg1Q9QUL7 311 aa19.1■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Vmn1r236Q05A06 334 aa19.1■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Epha5Q60629 876 aa19.1■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Cstl1Q80Y72 140 aa19.1■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Nhlrc3Q8CCH2 347 aa19.1■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Fhl4Q8CDC8 279 aa19.1■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Olfr916Q8VG53 310 aa19.1■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Fbp1Q9QXD6 338 aa19.1■□□□□ 0.65
Upf3a-201ENSMUST00000043767 SrpxQ9R0M3 464 aa19.1■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Lrrc3cA0A1B0GRI5 255 aa19.09■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Zdhhc22A0PK84 263 aa19.09■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Amy2a1E9PV85 245 aa19.09■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Zfp764E9QAP1 431 aa19.09■□□□□ 0.65
Upf3a-201ENSMUST00000043767 EndogO08600 294 aa19.09■□□□□ 0.65
Upf3a-201ENSMUST00000043767 HbzP06467 142 aa19.09■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Lsm5P62322 91 aa19.09■□□□□ 0.65
Upf3a-201ENSMUST00000043767 ElobP62869 118 aa19.09■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Ifna15Q61718 190 aa19.09■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Sdhaf2Q8C6I2 164 aa19.09■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Vmn1r178Q8R2B6 304 aa19.09■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Syt7Q9R0N7 403 aa19.09■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Fbln5Q9WVH9 448 aa19.09■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Trav12-1A0N8R1 115 aa19.09■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Glp1rO35659 463 aa19.09■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Slc16a13Q8CE94 428 aa19.09■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Scrt1Q99M85 348 aa19.09■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Bex3Q9WTZ9 124 aa19.09■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Sptan1P16546 2472 aaKnown RBP19.08■□□□□ 0.65
Upf3a-201ENSMUST00000043767 Ighv9-2A0A0B4J1J4 117 aa19.08■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Mrgpra9A0A140T8U8 332 aa19.08■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Kcnj3P63250 501 aa19.08■□□□□ 0.64
Upf3a-201ENSMUST00000043767 SgcaP82350 387 aa19.08■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Reg2Q08731 173 aa19.08■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Kat7Q5SVQ0 613 aaKnown RBP19.08■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Zfp663Q6NXM6 656 aa19.08■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Upk3bQ80YF6 275 aa19.08■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Tmprss11fQ8BHM9 439 aa19.08■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Cisd1Q91WS0 108 aaKnown RBP19.08■□□□□ 0.64
Upf3a-201ENSMUST00000043767 HaghQ99KB8 309 aa19.08■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Naa60Q9DBU2 242 aa19.08■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Gm45808A0A1B0GSH8 263 aa19.07■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Gm20815J3KMI0 227 aa19.07■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Gm20914J3QME2 227 aa19.07■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Psg17Q62056 475 aa19.07■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Gm21292Q78EE2 227 aa19.07■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Galnt14Q8BVG5 550 aa19.07■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Prodh2Q8VCZ9 456 aa19.07■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Elovl1Q9JLJ5 279 aa19.07■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Rnf7Q9WTZ1 113 aa19.07■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Ttc28Q80XJ3 2450 aa19.07■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Iglv3A0A0B4J1K5 122 aa19.07■□□□□ 0.64
Upf3a-201ENSMUST00000043767 LoxP28301 411 aa19.07■□□□□ 0.64
Upf3a-201ENSMUST00000043767 PpicP30412 212 aaKnown RBP19.07■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Icam2P35330 277 aa19.07■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Tmem184aQ3UFJ6 425 aa19.07■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Smim12Q78RX3 92 aa19.07■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Olfr924Q7TRB8 308 aa19.07■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Tox3Q80W03 575 aa19.07■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Lmo1Q924W9 156 aa19.07■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Flywch2Q9CQE9 139 aa19.07■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Ergic1Q9DC16 290 aaKnown RBP19.07■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Olfr926Q9EQ98 308 aa19.07■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Ube2dnl1A2AFH1 155 aa19.06■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Olfr1496B9EHG2 317 aa19.06■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Siva1O54926 175 aa19.06■□□□□ 0.64
Upf3a-201ENSMUST00000043767 P01723 117 aa19.06■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Rab5cP35278 216 aa19.06■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Klhl8P59280 629 aa19.06■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Rbp2Q08652 134 aa19.06■□□□□ 0.64
Upf3a-201ENSMUST00000043767 MENTQ569E4 350 aa19.06■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Prdx2Q61171 198 aaKnown RBP19.06■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Olfr1350Q8VF34 308 aa19.06■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Pgpep1lQ9CWB5 130 aa19.06■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Tceal8Q9CZY2 117 aa19.06■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Mbd2Q9Z2E1 414 aa19.06■□□□□ 0.64
Upf3a-201ENSMUST00000043767 A0A1Y7VLU2 103 aa19.05■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Aadacl4B1AVU5 407 aa19.05■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Ifna1P01572 189 aa19.05■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Gabra2P26048 451 aa19.05■□□□□ 0.64
Upf3a-201ENSMUST00000043767 P2ry1P49650 373 aa19.05■□□□□ 0.64
Upf3a-201ENSMUST00000043767 TspoP50637 169 aa19.05■□□□□ 0.64
Upf3a-201ENSMUST00000043767 AesP63002 197 aa19.05■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Olfr1385Q7TQT1 309 aa19.05■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Olfr1026Q7TR90 307 aa19.05■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Lpar6Q8BMC0 344 aa19.05■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Gins1Q9CZ15 196 aa19.05■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Rcl1Q9JJT0 373 aaKnown RBP19.05■□□□□ 0.64
Upf3a-201ENSMUST00000043767 1700015F17RikD3YUK8 150 aa19.05■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Gm45692D3Z0A0 150 aa19.05■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Olfr243E9PV96 316 aa19.05■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Gm17657E9PWY5 170 aa19.05■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Vmn1r129E9QA94 307 aa19.05■□□□□ 0.64
Upf3a-201ENSMUST00000043767 Gm8720K9J7F4 307 aa19.05■□□□□ 0.64
Upf3a-201ENSMUST00000043767 SdcbpO08992 299 aa19.05■□□□□ 0.64
Upf3a-201ENSMUST00000043767 P01798 113 aa19.05■□□□□ 0.64
Upf3a-201ENSMUST00000043767 GbaP17439 515 aa19.05■□□□□ 0.64
Upf3a-201ENSMUST00000043767 P18525 117 aa19.05■□□□□ 0.64
Retrieved 100 of 22,080 RNA–protein pairs in 96.2 ms