RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 TOMM40O96008 361 aa12.97□□□□□ -0.33
SYNRG-223ENST00000616179 SCGB2A2Q13296 93 aa12.97□□□□□ -0.33
SYNRG-223ENST00000616179 MLANAQ16655 118 aa12.97□□□□□ -0.33
SYNRG-223ENST00000616179 VWC2Q2TAL6 325 aa12.97□□□□□ -0.33
SYNRG-223ENST00000616179 TMEM97Q5BJF2 176 aa12.97□□□□□ -0.33
SYNRG-223ENST00000616179 PDPNQ86YL7 162 aa12.97□□□□□ -0.33
SYNRG-223ENST00000616179 SNRNP40Q96DI7 357 aaKnown RBP12.97□□□□□ -0.33
SYNRG-223ENST00000616179 TNCP24821 2201 aa12.97□□□□□ -0.33
SYNRG-223ENST00000616179 SYS1-DBNDD2H3BUS1 97 aa12.97□□□□□ -0.33
SYNRG-223ENST00000616179 ENSAO43768 121 aaKnown RBP12.97□□□□□ -0.33
SYNRG-223ENST00000616179 CTRLP40313 264 aa12.97□□□□□ -0.33
SYNRG-223ENST00000616179 LRRC29Q8WV35 223 aa12.97□□□□□ -0.33
SYNRG-223ENST00000616179 PERPQ96FX8 193 aa12.97□□□□□ -0.33
SYNRG-223ENST00000616179 TAX1BP3O14907 124 aa12.97□□□□□ -0.33
SYNRG-223ENST00000616179 SARAFQ96BY9 339 aa12.97□□□□□ -0.33
SYNRG-223ENST00000616179 OR51B2Q9Y5P1 312 aa12.97□□□□□ -0.33
SYNRG-223ENST00000616179 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.96□□□□□ -0.33
SYNRG-223ENST00000616179 C9JCJ5 164 aa12.96□□□□□ -0.33
SYNRG-223ENST00000616179 HBBP68871 147 aa12.96□□□□□ -0.33
SYNRG-223ENST00000616179 PAX2Q02962 417 aa12.96□□□□□ -0.33
SYNRG-223ENST00000616179 ZNF716A6NP11 495 aa12.96□□□□□ -0.33
SYNRG-223ENST00000616179 FAM87AP0C7U9 286 aa12.96□□□□□ -0.33
SYNRG-223ENST00000616179 GUCD1Q96NT3 240 aa12.96□□□□□ -0.33
SYNRG-223ENST00000616179 A8MWL6 223 aa12.96□□□□□ -0.34
SYNRG-223ENST00000616179 CELA3BP08861 270 aa12.96□□□□□ -0.34
SYNRG-223ENST00000616179 ERHP84090 104 aaKnown RBP12.96□□□□□ -0.34
SYNRG-223ENST00000616179 HIST1H1AQ02539 215 aaPredicted RBP12.96□□□□□ -0.34
SYNRG-223ENST00000616179 RAB1CQ92928 201 aa12.96□□□□□ -0.34
SYNRG-223ENST00000616179 LIPFP07098 398 aa12.95□□□□□ -0.34
SYNRG-223ENST00000616179 MNX1P50219 401 aaPredicted RBP12.95□□□□□ -0.34
SYNRG-223ENST00000616179 C10orf113Q5VZT2 155 aa12.95□□□□□ -0.34
SYNRG-223ENST00000616179 OR1L4Q8NGR5 311 aa12.95□□□□□ -0.34
SYNRG-223ENST00000616179 OR9G1Q8NH87 305 aa12.95□□□□□ -0.34
SYNRG-223ENST00000616179 JKAMPQ9P055 326 aa12.95□□□□□ -0.34
SYNRG-223ENST00000616179 CLDN18P56856 261 aa12.95□□□□□ -0.34
SYNRG-223ENST00000616179 OR2Z1Q8NG97 314 aa12.95□□□□□ -0.34
SYNRG-223ENST00000616179 FOXF2Q12947 444 aa12.95□□□□□ -0.34
SYNRG-223ENST00000616179 PRDM6Q9NQX0 595 aa12.95□□□□□ -0.34
SYNRG-223ENST00000616179 CD5LO43866 347 aa12.94□□□□□ -0.34
SYNRG-223ENST00000616179 APOHP02749 345 aaPredicted RBP12.94□□□□□ -0.34
SYNRG-223ENST00000616179 ARFGEF3Q5TH69 2177 aa12.94□□□□□ -0.34
SYNRG-223ENST00000616179 IGLV3-32A0A0A0MS00 114 aa12.94□□□□□ -0.34
SYNRG-223ENST00000616179 A0A1B0GV72 72 aa12.94□□□□□ -0.34
SYNRG-223ENST00000616179 C5orf67F2Z3F1 127 aa12.94□□□□□ -0.34
SYNRG-223ENST00000616179 PCOLCEQ15113 449 aa12.94□□□□□ -0.34
SYNRG-223ENST00000616179 SRSF7Q16629 238 aaKnown RBP eCLIP12.94□□□□□ -0.34
SYNRG-223ENST00000616179 WFDC12Q8WWY7 111 aa12.94□□□□□ -0.34
SYNRG-223ENST00000616179 GRAMD2BQ96HH9 432 aa12.94□□□□□ -0.34
SYNRG-223ENST00000616179 PKIBQ9C010 78 aa12.94□□□□□ -0.34
SYNRG-223ENST00000616179 HES4Q9HCC6 221 aa12.94□□□□□ -0.34
SYNRG-223ENST00000616179 AP5S1Q9NUS5 200 aa12.94□□□□□ -0.34
SYNRG-223ENST00000616179 IGHV5-10-1A0A0J9YXX1 117 aa12.94□□□□□ -0.34
SYNRG-223ENST00000616179 C2CD4DB7Z1M9 353 aa12.94□□□□□ -0.34
SYNRG-223ENST00000616179 AGFG2O95081 481 aa12.94□□□□□ -0.34
SYNRG-223ENST00000616179 CELA3AP09093 270 aa12.94□□□□□ -0.34
SYNRG-223ENST00000616179 ESDP10768 282 aa12.94□□□□□ -0.34
SYNRG-223ENST00000616179 PRRC2CQ9Y520 2896 aaKnown RBP12.94□□□□□ -0.34
SYNRG-223ENST00000616179 THADAQ6YHU6 1953 aa12.94□□□□□ -0.34
SYNRG-223ENST00000616179 A1L4Q6 167 aa12.93□□□□□ -0.34
SYNRG-223ENST00000616179 MAGEA5P43359 124 aa12.93□□□□□ -0.34
SYNRG-223ENST00000616179 HSPE1P61604 102 aaKnown RBP12.93□□□□□ -0.34
SYNRG-223ENST00000616179 PRNTQ86SH4 94 aa12.93□□□□□ -0.34
SYNRG-223ENST00000616179 A0A0G2JLM5 398 aa12.93□□□□□ -0.34
SYNRG-223ENST00000616179 CD46P15529 392 aa12.93□□□□□ -0.34
SYNRG-223ENST00000616179 SP5Q6BEB4 398 aaPredicted RBP12.93□□□□□ -0.34
SYNRG-223ENST00000616179 KLF7O75840 302 aaPredicted RBP12.93□□□□□ -0.34
SYNRG-223ENST00000616179 MMP23AO75900 390 aa12.93□□□□□ -0.34
SYNRG-223ENST00000616179 PPBPP02775 128 aa12.93□□□□□ -0.34
SYNRG-223ENST00000616179 C1orf53Q5VUE5 145 aa12.93□□□□□ -0.34
SYNRG-223ENST00000616179 LOXL2Q9Y4K0 774 aa12.93□□□□□ -0.34
SYNRG-223ENST00000616179 hADV38S2A0JD32 116 aa12.93□□□□□ -0.34
SYNRG-223ENST00000616179 REG1BP48304 166 aa12.93□□□□□ -0.34
SYNRG-223ENST00000616179 ZNF718Q3SXZ3 478 aa12.93□□□□□ -0.34
SYNRG-223ENST00000616179 NEUROG1Q92886 237 aa12.93□□□□□ -0.34
SYNRG-223ENST00000616179 HES7Q9BYE0 225 aa12.93□□□□□ -0.34
SYNRG-223ENST00000616179 MRPL27Q9P0M9 148 aaKnown RBP12.93□□□□□ -0.34
SYNRG-223ENST00000616179 LOC102723996A0A087X1L8 192 aa12.92□□□□□ -0.34
SYNRG-223ENST00000616179 PRSS1P07477 247 aa12.92□□□□□ -0.34
SYNRG-223ENST00000616179 GUSBP1Q15486 140 aa12.92□□□□□ -0.34
SYNRG-223ENST00000616179 Q6P435 159 aa12.92□□□□□ -0.34
SYNRG-223ENST00000616179 FOXL2NBQ6ZUU3 175 aa12.92□□□□□ -0.34
SYNRG-223ENST00000616179 C18orf15Q96N68 181 aa12.92□□□□□ -0.34
SYNRG-223ENST00000616179 TMUB1Q9BVT8 246 aa12.92□□□□□ -0.34
SYNRG-223ENST00000616179 SH3BGRL2Q9UJC5 107 aa12.92□□□□□ -0.34
SYNRG-223ENST00000616179 IGLV2-14P01704 120 aa12.92□□□□□ -0.34
SYNRG-223ENST00000616179 CYC1P08574 325 aa12.92□□□□□ -0.34
SYNRG-223ENST00000616179 AREGP15514 252 aa12.92□□□□□ -0.34
SYNRG-223ENST00000616179 ARL3P36405 182 aa12.92□□□□□ -0.34
SYNRG-223ENST00000616179 ZNF788Q6ZQV5 615 aa12.92□□□□□ -0.34
SYNRG-223ENST00000616179 MRPS17Q9Y2R5 130 aaKnown RBP12.92□□□□□ -0.34
SYNRG-223ENST00000616179 PEX7O00628 323 aa12.92□□□□□ -0.34
SYNRG-223ENST00000616179 GFRA3O60609 400 aa12.92□□□□□ -0.34
SYNRG-223ENST00000616179 DEFB125Q8N687 156 aa12.92□□□□□ -0.34
SYNRG-223ENST00000616179 C5orf17Q8NAS9 161 aa12.92□□□□□ -0.34
SYNRG-223ENST00000616179 GGTLC3B5MD39 225 aa12.91□□□□□ -0.34
SYNRG-223ENST00000616179 MTURNQ8N3F0 131 aa12.91□□□□□ -0.34
SYNRG-223ENST00000616179 NCOR1P1Q9H4R4 102 aa12.91□□□□□ -0.34
SYNRG-223ENST00000616179 MED12LQ86YW9 2145 aa12.91□□□□□ -0.34
SYNRG-223ENST00000616179 SIGMAR1Q99720 223 aa12.91□□□□□ -0.34
SYNRG-223ENST00000616179 METRNQ9UJH8 293 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms