RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 ZNF616Q08AN1 781 aa9.24□□□□□ -0.93
HLA-F-230ENST00000606273 RBMS2Q15434 407 aaKnown RBP9.24□□□□□ -0.93
HLA-F-230ENST00000606273 TRIM16LQ309B1 348 aa9.24□□□□□ -0.93
HLA-F-230ENST00000606273 Q6ZRM9 215 aa9.24□□□□□ -0.93
HLA-F-230ENST00000606273 SGPP2Q8IWX5 399 aa9.24□□□□□ -0.93
HLA-F-230ENST00000606273 SELENOHQ8IZQ5 122 aaKnown RBP9.24□□□□□ -0.93
HLA-F-230ENST00000606273 OR10W1Q8NGF6 305 aa9.24□□□□□ -0.93
HLA-F-230ENST00000606273 GALNT14Q96FL9 552 aa9.24□□□□□ -0.93
HLA-F-230ENST00000606273 FYTTD1Q96QD9 318 aaKnown RBP9.24□□□□□ -0.93
HLA-F-230ENST00000606273 PHB2Q99623 299 aa9.24□□□□□ -0.93
HLA-F-230ENST00000606273 SLC25A21Q9BQT8 299 aaPredicted RBP9.24□□□□□ -0.93
HLA-F-230ENST00000606273 FOXA2Q9Y261 457 aaPredicted RBP9.24□□□□□ -0.93
HLA-F-230ENST00000606273 SORL1Q92673 2214 aa9.23□□□□□ -0.93
HLA-F-230ENST00000606273 A0A0B4J293 547 aa9.23□□□□□ -0.93
HLA-F-230ENST00000606273 ACTL6BO94805 426 aa9.23□□□□□ -0.93
HLA-F-230ENST00000606273 REG1AP05451 166 aa9.23□□□□□ -0.93
HLA-F-230ENST00000606273 MAS1LP35410 378 aa9.23□□□□□ -0.93
HLA-F-230ENST00000606273 RAB9AP51151 201 aa9.23□□□□□ -0.93
HLA-F-230ENST00000606273 SUMO1P63165 101 aaKnown RBP9.23□□□□□ -0.93
HLA-F-230ENST00000606273 RUNX1Q01196 453 aa9.23□□□□□ -0.93
HLA-F-230ENST00000606273 TMEM267Q0VDI3 215 aaPredicted RBP9.23□□□□□ -0.93
HLA-F-230ENST00000606273 PPP1R1AQ13522 171 aa9.23□□□□□ -0.93
HLA-F-230ENST00000606273 ANKRD55Q3KP44 614 aa9.23□□□□□ -0.93
HLA-F-230ENST00000606273 DLX4Q92988 240 aaPredicted RBP9.23□□□□□ -0.93
HLA-F-230ENST00000606273 UBE2E2Q96LR5 201 aa9.23□□□□□ -0.93
HLA-F-230ENST00000606273 TMEM56Q96MV1 263 aa9.23□□□□□ -0.93
HLA-F-230ENST00000606273 SCGB3A2Q96PL1 93 aa9.23□□□□□ -0.93
HLA-F-230ENST00000606273 C7orf50Q9BRJ6 194 aaKnown RBP9.23□□□□□ -0.93
HLA-F-230ENST00000606273 AIFM2Q9BRQ8 373 aa9.23□□□□□ -0.93
HLA-F-230ENST00000606273 GNB4Q9HAV0 340 aa9.23□□□□□ -0.93
HLA-F-230ENST00000606273 PFDN2Q9UHV9 154 aa9.23□□□□□ -0.93
HLA-F-230ENST00000606273 TMEM56-RWDD3S4R434 201 aa9.23□□□□□ -0.93
HLA-F-230ENST00000606273 IGLC7A0M8Q6 106 aa9.22□□□□□ -0.93
HLA-F-230ENST00000606273 C15orf61A6NNL5 157 aa9.22□□□□□ -0.93
HLA-F-230ENST00000606273 ZNF561-AS1K7EIQ3 104 aa9.22□□□□□ -0.93
HLA-F-230ENST00000606273 CREBL2O60519 120 aaPredicted RBP9.22□□□□□ -0.93
HLA-F-230ENST00000606273 ANXA7P20073 488 aaKnown RBP9.22□□□□□ -0.93
HLA-F-230ENST00000606273 ASAH1Q13510 395 aa9.22□□□□□ -0.93
HLA-F-230ENST00000606273 TMEM128Q5BJH2 165 aa9.22□□□□□ -0.93
HLA-F-230ENST00000606273 TMEM268Q5VZI3 342 aa9.22□□□□□ -0.93
HLA-F-230ENST00000606273 ACSM6Q6P461 480 aa9.22□□□□□ -0.93
HLA-F-230ENST00000606273 H2BFWTQ7Z2G1 175 aa9.22□□□□□ -0.93
HLA-F-230ENST00000606273 SLC25A42Q86VD7 318 aa9.22□□□□□ -0.93
HLA-F-230ENST00000606273 CADM3Q8N126 398 aa9.22□□□□□ -0.93
HLA-F-230ENST00000606273 CENPSQ8N2Z9 138 aa9.22□□□□□ -0.93
HLA-F-230ENST00000606273 SLC35G3Q8N808 338 aa9.22□□□□□ -0.93
HLA-F-230ENST00000606273 ZNF491Q8N8L2 437 aa9.22□□□□□ -0.93
HLA-F-230ENST00000606273 GPR146Q96CH1 333 aa9.22□□□□□ -0.93
HLA-F-230ENST00000606273 OR5B12Q96R08 314 aa9.22□□□□□ -0.93
HLA-F-230ENST00000606273 QTRT1Q9BXR0 403 aaKnown RBP9.22□□□□□ -0.93
HLA-F-230ENST00000606273 ALX4Q9H161 411 aaPredicted RBP9.22□□□□□ -0.93
HLA-F-230ENST00000606273 RETNQ9HD89 108 aa9.22□□□□□ -0.93
HLA-F-230ENST00000606273 TMEM14BQ9NUH8 114 aa9.22□□□□□ -0.93
HLA-F-230ENST00000606273 OR51B2Q9Y5P1 312 aa9.22□□□□□ -0.93
HLA-F-230ENST00000606273 DMRT1Q9Y5R6 373 aa9.22□□□□□ -0.93
HLA-F-230ENST00000606273 CENPXA8MT69 81 aa9.21□□□□□ -0.94
HLA-F-230ENST00000606273 B3GALNT1O75752 331 aa9.21□□□□□ -0.94
HLA-F-230ENST00000606273 SFT2D2O95562 160 aa9.21□□□□□ -0.94
HLA-F-230ENST00000606273 TCRBP04435 133 aa9.21□□□□□ -0.94
HLA-F-230ENST00000606273 AKR1C2P52895 323 aa9.21□□□□□ -0.94
HLA-F-230ENST00000606273 WT1-ASQ06250 92 aa9.21□□□□□ -0.94
HLA-F-230ENST00000606273 SPINK9Q5DT21 86 aa9.21□□□□□ -0.94
HLA-F-230ENST00000606273 LYZL2Q7Z4W2 148 aa9.21□□□□□ -0.94
HLA-F-230ENST00000606273 TTC9CQ8N5M4 171 aa9.21□□□□□ -0.94
HLA-F-230ENST00000606273 RBPMSQ93062 196 aaKnown RBP9.21□□□□□ -0.94
HLA-F-230ENST00000606273 SPIN2AQ99865 258 aa9.21□□□□□ -0.94
HLA-F-230ENST00000606273 SPIN2BQ9BPZ2 258 aa9.21□□□□□ -0.94
HLA-F-230ENST00000606273 FAM110AQ9BQ89 295 aa9.21□□□□□ -0.94
HLA-F-230ENST00000606273 COMMD5Q9GZQ3 224 aa9.21□□□□□ -0.94
HLA-F-230ENST00000606273 HIPK2Q9H2X6 1198 aa9.21□□□□□ -0.94
HLA-F-230ENST00000606273 NDUFA4L2Q9NRX3 87 aa9.21□□□□□ -0.94
HLA-F-230ENST00000606273 COA4Q9NYJ1 87 aa9.21□□□□□ -0.94
HLA-F-230ENST00000606273 VPS13DQ5THJ4 4388 aa9.2□□□□□ -0.94
HLA-F-230ENST00000606273 C9orf170A2RU37 121 aa9.2□□□□□ -0.94
HLA-F-230ENST00000606273 SNAPC5O75971 98 aa9.2□□□□□ -0.94
HLA-F-230ENST00000606273 IGHV3-11P01762 117 aa9.2□□□□□ -0.94
HLA-F-230ENST00000606273 TRGV3P03979 118 aa9.2□□□□□ -0.94
HLA-F-230ENST00000606273 FGF2P09038 288 aa9.2□□□□□ -0.94
HLA-F-230ENST00000606273 TPPP2P59282 170 aa9.2□□□□□ -0.94
HLA-F-230ENST00000606273 TMEM65Q6PI78 240 aa9.2□□□□□ -0.94
HLA-F-230ENST00000606273 TMEM68Q96MH6 324 aa9.2□□□□□ -0.94
HLA-F-230ENST00000606273 HINT2Q9BX68 163 aa9.2□□□□□ -0.94
HLA-F-230ENST00000606273 C20orf85Q9H1P6 137 aa9.2□□□□□ -0.94
HLA-F-230ENST00000606273 ZNF355PQ9NSJ1 428 aa9.2□□□□□ -0.94
HLA-F-230ENST00000606273 PRNDQ9UKY0 176 aa9.2□□□□□ -0.94
HLA-F-230ENST00000606273 KCNIP3Q9Y2W7 256 aa9.2□□□□□ -0.94
HLA-F-230ENST00000606273 TRAV6A0A075B6T7 132 aa9.19□□□□□ -0.94
HLA-F-230ENST00000606273 TRBV9A0A0B4J1U6 114 aa9.19□□□□□ -0.94
HLA-F-230ENST00000606273 NPIPB5A8MRT5 1133 aa9.19□□□□□ -0.94
HLA-F-230ENST00000606273 ST8SIA3O43173 380 aa9.19□□□□□ -0.94
HLA-F-230ENST00000606273 DEDDO75618 318 aa9.19□□□□□ -0.94
HLA-F-230ENST00000606273 CRYGCP07315 174 aa9.19□□□□□ -0.94
HLA-F-230ENST00000606273 OR4E1P0C645 316 aa9.19□□□□□ -0.94
HLA-F-230ENST00000606273 TRAPPC2P0DI81 140 aa9.19□□□□□ -0.94
HLA-F-230ENST00000606273 TRAPPC2BP0DI82 140 aa9.19□□□□□ -0.94
HLA-F-230ENST00000606273 CTRB1P17538 263 aa9.19□□□□□ -0.94
HLA-F-230ENST00000606273 PSMB6P28072 239 aa9.19□□□□□ -0.94
HLA-F-230ENST00000606273 MFAP2P55001 183 aa9.19□□□□□ -0.94
HLA-F-230ENST00000606273 UBE2MP61081 183 aaKnown RBP9.19□□□□□ -0.94
HLA-F-230ENST00000606273 NMSQ5H8A3 153 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 344.4 ms