RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 C3orf79P0CE67 100 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 PYYP10082 97 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 MORN2Q502X0 79 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 C1orf174Q8IYL3 243 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 WDR31Q8NA23 367 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 AAMDCQ9H7C9 122 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 ZFP30Q9Y2G7 519 aa8.75□□□□□ -1.01
USB1-212ENST00000566082 ZNF503-AS2A6NEH8 195 aa8.74□□□□□ -1.01
USB1-212ENST00000566082 IL18BPO95998 194 aa8.74□□□□□ -1.01
USB1-212ENST00000566082 TYMSP04818 313 aa8.74□□□□□ -1.01
USB1-212ENST00000566082 GPX1P07203 203 aa8.74□□□□□ -1.01
USB1-212ENST00000566082 MYOD1P15172 320 aa8.74□□□□□ -1.01
USB1-212ENST00000566082 PEAR1Q5VY43 1037 aaPredicted RBP8.74□□□□□ -1.01
USB1-212ENST00000566082 SELENOKQ9Y6D0 94 aa8.74□□□□□ -1.01
USB1-212ENST00000566082 CHD7Q9P2D1 2997 aa8.74□□□□□ -1.01
USB1-212ENST00000566082 MED13LQ71F56 2210 aa8.74□□□□□ -1.01
USB1-212ENST00000566082 IQCF6A8MYZ5 107 aa8.74□□□□□ -1.01
USB1-212ENST00000566082 CORTO00230 105 aa8.74□□□□□ -1.01
USB1-212ENST00000566082 NMUP48645 174 aa8.74□□□□□ -1.01
USB1-212ENST00000566082 RIGQ13278 110 aa8.74□□□□□ -1.01
USB1-212ENST00000566082 TCF24Q7RTU0 167 aa8.74□□□□□ -1.01
USB1-212ENST00000566082 GCSAMQ8N6F7 178 aa8.74□□□□□ -1.01
USB1-212ENST00000566082 OSTCQ9NRP0 149 aa8.74□□□□□ -1.01
USB1-212ENST00000566082 IZUMO1RA6ND01 250 aa8.74□□□□□ -1.01
USB1-212ENST00000566082 J3QW42 95 aa8.74□□□□□ -1.01
USB1-212ENST00000566082 TMEM144Q7Z5S9 345 aa8.74□□□□□ -1.01
USB1-212ENST00000566082 FBXL7Q9UJT9 491 aa8.74□□□□□ -1.01
USB1-212ENST00000566082 PRR14LQ5THK1 2151 aa8.74□□□□□ -1.01
USB1-212ENST00000566082 TRAV5A0A0B4J249 113 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 PEX7O00628 323 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 NUPR1O60356 82 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 PRSS1P07477 247 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 SELENOTP62341 195 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 GNG5P63218 68 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 Q6ZT83 130 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 LINC00305Q7Z4B0 112 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 C5orf17Q8NAS9 161 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 COQ2Q96H96 371 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 IFI27L2Q9H2X8 130 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 EML5Q05BV3 1969 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 SPTAN1Q13813 2472 aaKnown RBP8.73□□□□□ -1.01
USB1-212ENST00000566082 C15orf61A6NNL5 157 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 LINC00614P0C842 121 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 HBBP68871 147 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 CRIP3Q6Q6R5 217 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 SLC25A10Q9UBX3 287 aaPredicted RBP8.73□□□□□ -1.01
USB1-212ENST00000566082 CDC42EP3Q9UKI2 254 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 SAA2-SAA4A0A096LPE2 208 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 GFRA3O60609 400 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 HLA-DRB1P01911 266 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 SAA2P0DJI9 122 aaPredicted RBP8.73□□□□□ -1.01
USB1-212ENST00000566082 CA7P43166 264 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 SRSF12Q8WXF0 261 aaKnown RBP8.73□□□□□ -1.01
USB1-212ENST00000566082 RPEQ96AT9 228 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 RASL11BQ9BPW5 248 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 C20orf144Q9BQM9 153 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 FGF23Q9GZV9 251 aaPredicted RBP8.73□□□□□ -1.01
USB1-212ENST00000566082 NGBQ9NPG2 151 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 IDI2-AS1Q9NZ38 188 aa8.73□□□□□ -1.01
USB1-212ENST00000566082 MRPS18CQ9Y3D5 142 aaKnown RBP8.73□□□□□ -1.01
USB1-212ENST00000566082 ACACAQ13085 2346 aa8.72□□□□□ -1.01
USB1-212ENST00000566082 TRAV9-2A0A087WT02 112 aa8.72□□□□□ -1.01
USB1-212ENST00000566082 NPIPB11E5RHQ5 1161 aa8.72□□□□□ -1.01
USB1-212ENST00000566082 PRB4P10163 310 aaPredicted RBP8.72□□□□□ -1.01
USB1-212ENST00000566082 COMPP49747 757 aaPredicted RBP8.72□□□□□ -1.01
USB1-212ENST00000566082 TDRG1Q3Y452 100 aa8.72□□□□□ -1.01
USB1-212ENST00000566082 RAB1CQ92928 201 aa8.72□□□□□ -1.01
USB1-212ENST00000566082 PYGO2Q9BRQ0 406 aa8.72□□□□□ -1.01
USB1-212ENST00000566082 C19orf24Q9BVV8 132 aa8.72□□□□□ -1.01
USB1-212ENST00000566082 OR2J3O76001 311 aa8.72□□□□□ -1.01
USB1-212ENST00000566082 FBLN7Q53RD9 439 aa8.72□□□□□ -1.01
USB1-212ENST00000566082 COA6Q5JTJ3 125 aaKnown RBP8.72□□□□□ -1.01
USB1-212ENST00000566082 LHFPL4Q7Z7J7 247 aa8.72□□□□□ -1.01
USB1-212ENST00000566082 FAM216BQ8N7L0 139 aa8.72□□□□□ -1.01
USB1-212ENST00000566082 NDFIP1Q9BT67 221 aa8.72□□□□□ -1.01
USB1-212ENST00000566082 MBNL3Q9NUK0 354 aaKnown RBP8.72□□□□□ -1.01
USB1-212ENST00000566082 A6NDN8 102 aa8.72□□□□□ -1.01
USB1-212ENST00000566082 F2Z2F3 143 aa8.72□□□□□ -1.01
USB1-212ENST00000566082 NKX2-8O15522 239 aa8.72□□□□□ -1.01
USB1-212ENST00000566082 PRRX1P54821 245 aa8.72□□□□□ -1.01
USB1-212ENST00000566082 LGALS4P56470 323 aa8.72□□□□□ -1.01
USB1-212ENST00000566082 OR10J3Q5JRS4 329 aa8.72□□□□□ -1.01
USB1-212ENST00000566082 Q6ZPA2 131 aa8.72□□□□□ -1.01
USB1-212ENST00000566082 GRAMD2BQ96HH9 432 aa8.72□□□□□ -1.01
USB1-212ENST00000566082 LINC00479Q96M42 142 aa8.72□□□□□ -1.01
USB1-212ENST00000566082 MRPL32Q9BYC8 188 aaKnown RBP8.72□□□□□ -1.01
USB1-212ENST00000566082 C2orf16Q68DN1 1984 aa8.72□□□□□ -1.01
USB1-212ENST00000566082 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.71□□□□□ -1.01
USB1-212ENST00000566082 PRRG2O14669 202 aa8.71□□□□□ -1.01
USB1-212ENST00000566082 ACP1P24666 158 aa8.71□□□□□ -1.01
USB1-212ENST00000566082 TMEM108Q6UXF1 575 aa8.71□□□□□ -1.01
USB1-212ENST00000566082 GOLT1AQ6ZVE7 132 aa8.71□□□□□ -1.01
USB1-212ENST00000566082 OR10W1Q8NGF6 305 aa8.71□□□□□ -1.01
USB1-212ENST00000566082 J3QR89 54 aa8.71□□□□□ -1.02
USB1-212ENST00000566082 NBEAP1P0C6P0 100 aa8.71□□□□□ -1.02
USB1-212ENST00000566082 RPL27AP46776 148 aaKnown RBP8.71□□□□□ -1.02
USB1-212ENST00000566082 ZFP36L1Q07352 338 aaKnown RBP8.71□□□□□ -1.02
USB1-212ENST00000566082 MLANAQ16655 118 aa8.71□□□□□ -1.02
USB1-212ENST00000566082 LDLRAD2Q5SZI1 272 aa8.71□□□□□ -1.02
USB1-212ENST00000566082 INSIG2Q9Y5U4 225 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms