RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 MIR17HGQ75NE6 70 aa15.32■□□□□ 0.04
SMPD3-203ENST00000563226 FBXL15Q9H469 300 aa15.32■□□□□ 0.04
SMPD3-203ENST00000563226 MRPL36Q9P0J6 103 aaKnown RBP15.32■□□□□ 0.04
SMPD3-203ENST00000563226 HILPDAQ9Y5L2 63 aa15.32■□□□□ 0.04
SMPD3-203ENST00000563226 CXorf1O96002 111 aa15.31■□□□□ 0.04
SMPD3-203ENST00000563226 FOLR2P14207 255 aa15.31■□□□□ 0.04
SMPD3-203ENST00000563226 HTR1DP28221 377 aa15.31■□□□□ 0.04
SMPD3-203ENST00000563226 GPX4P36969 197 aaPredicted RBP15.31■□□□□ 0.04
SMPD3-203ENST00000563226 RPL27AP46776 148 aaKnown RBP15.31■□□□□ 0.04
SMPD3-203ENST00000563226 RHOBP62745 196 aa15.31■□□□□ 0.04
SMPD3-203ENST00000563226 GNB1P62873 340 aa15.31■□□□□ 0.04
SMPD3-203ENST00000563226 OR51G1Q8NGK1 321 aa15.31■□□□□ 0.04
SMPD3-203ENST00000563226 CACNG8Q8WXS5 425 aa15.31■□□□□ 0.04
SMPD3-203ENST00000563226 ODF3BA8MYP8 253 aa15.31■□□□□ 0.04
SMPD3-203ENST00000563226 PRTN3P24158 256 aa15.31■□□□□ 0.04
SMPD3-203ENST00000563226 EFNA4P52798 201 aa15.31■□□□□ 0.04
SMPD3-203ENST00000563226 MFAP2P55001 183 aa15.31■□□□□ 0.04
SMPD3-203ENST00000563226 PNRC1Q12796 327 aaPredicted RBP15.31■□□□□ 0.04
SMPD3-203ENST00000563226 FBLN7Q53RD9 439 aa15.31■□□□□ 0.04
SMPD3-203ENST00000563226 CST9LP1Q5W188 147 aa15.31■□□□□ 0.04
SMPD3-203ENST00000563226 RUSC1-AS1Q66K80 236 aa15.31■□□□□ 0.04
SMPD3-203ENST00000563226 SLC35E1Q96K37 410 aa15.31■□□□□ 0.04
SMPD3-203ENST00000563226 FCN1O00602 326 aa15.3■□□□□ 0.04
SMPD3-203ENST00000563226 VENTXO95231 258 aa15.3■□□□□ 0.04
SMPD3-203ENST00000563226 RAB5AP20339 215 aa15.3■□□□□ 0.04
SMPD3-203ENST00000563226 COMPP49747 757 aaPredicted RBP15.3■□□□□ 0.04
SMPD3-203ENST00000563226 HABP2Q14520 560 aaPredicted RBP15.3■□□□□ 0.04
SMPD3-203ENST00000563226 FAM78BQ5VT40 261 aa15.3■□□□□ 0.04
SMPD3-203ENST00000563226 CYP2G1PQ6ZSU1 146 aa15.3■□□□□ 0.04
SMPD3-203ENST00000563226 PPP1R27Q86WC6 154 aa15.3■□□□□ 0.04
SMPD3-203ENST00000563226 RNASEH2CQ8TDP1 164 aaKnown RBP15.3■□□□□ 0.04
SMPD3-203ENST00000563226 C2CD4CQ8TF44 421 aa15.3■□□□□ 0.04
SMPD3-203ENST00000563226 DPM3Q9P2X0 92 aa15.3■□□□□ 0.04
SMPD3-203ENST00000563226 MED13LQ71F56 2210 aa15.3■□□□□ 0.04
SMPD3-203ENST00000563226 IGHV2-5P01817 119 aa15.29■□□□□ 0.04
SMPD3-203ENST00000563226 CD24P25063 80 aa15.29■□□□□ 0.04
SMPD3-203ENST00000563226 GCHFRP30047 84 aa15.29■□□□□ 0.04
SMPD3-203ENST00000563226 CFHR4Q92496 578 aa15.29■□□□□ 0.04
SMPD3-203ENST00000563226 NAT8Q9UHE5 227 aa15.29■□□□□ 0.04
SMPD3-203ENST00000563226 URGCP-MRPS24S4R325 110 aa15.29■□□□□ 0.04
SMPD3-203ENST00000563226 COL12A1Q99715 3063 aa15.29■□□□□ 0.04
SMPD3-203ENST00000563226 SUB1P53999 127 aaKnown RBP eCLIP15.29■□□□□ 0.04
SMPD3-203ENST00000563226 LGALS4P56470 323 aa15.29■□□□□ 0.04
SMPD3-203ENST00000563226 VMO1Q7Z5L0 202 aa15.29■□□□□ 0.04
SMPD3-203ENST00000563226 SSX3Q99909 188 aa15.29■□□□□ 0.04
SMPD3-203ENST00000563226 WNK2Q9Y3S1 2297 aa15.29■□□□□ 0.04
SMPD3-203ENST00000563226 B4DEV8 164 aa15.28■□□□□ 0.04
SMPD3-203ENST00000563226 TEX22C9J3V5 150 aa15.28■□□□□ 0.04
SMPD3-203ENST00000563226 MAS1LP35410 378 aa15.28■□□□□ 0.04
SMPD3-203ENST00000563226 LCN2P80188 198 aa15.28■□□□□ 0.04
SMPD3-203ENST00000563226 ADIRFQ15847 76 aa15.28■□□□□ 0.04
SMPD3-203ENST00000563226 TMEM241Q24JQ0 296 aa15.28■□□□□ 0.04
SMPD3-203ENST00000563226 Q8WTZ3 238 aa15.28■□□□□ 0.04
SMPD3-203ENST00000563226 NPIPB3Q92617 1050 aa15.28■□□□□ 0.04
SMPD3-203ENST00000563226 YTHDF2Q9Y5A9 579 aaKnown RBP15.28■□□□□ 0.04
SMPD3-203ENST00000563226 SVEP1Q4LDE5 3571 aa15.28■□□□□ 0.04
SMPD3-203ENST00000563226 ELOBQ15370 118 aa15.28■□□□□ 0.04
SMPD3-203ENST00000563226 RNF212Q495C1 297 aa15.28■□□□□ 0.04
SMPD3-203ENST00000563226 FUT9Q9Y231 359 aa15.28■□□□□ 0.04
SMPD3-203ENST00000563226 CSMD1Q96PZ7 3565 aa15.27■□□□□ 0.04
SMPD3-203ENST00000563226 IGKV1D-37A0A075B6S9 117 aa15.27■□□□□ 0.03
SMPD3-203ENST00000563226 NDUFS6O75380 124 aaKnown RBP15.27■□□□□ 0.03
SMPD3-203ENST00000563226 CXCL1P09341 107 aa15.27■□□□□ 0.03
SMPD3-203ENST00000563226 RPL23P62829 140 aaKnown RBP15.27■□□□□ 0.03
SMPD3-203ENST00000563226 MISP3Q96FF7 219 aa15.27■□□□□ 0.03
SMPD3-203ENST00000563226 DERL1Q9BUN8 251 aa15.27■□□□□ 0.03
SMPD3-203ENST00000563226 BPESC1Q9GZL8 116 aa15.27■□□□□ 0.03
SMPD3-203ENST00000563226 RNF224P0DH78 156 aa15.26■□□□□ 0.03
SMPD3-203ENST00000563226 PAX2Q02962 417 aa15.26■□□□□ 0.03
SMPD3-203ENST00000563226 PVRIGQ6DKI7 326 aa15.26■□□□□ 0.03
SMPD3-203ENST00000563226 DYNAPQ8N1N2 210 aa15.26■□□□□ 0.03
SMPD3-203ENST00000563226 TMEM37Q8WXS4 190 aa15.26■□□□□ 0.03
SMPD3-203ENST00000563226 SPTAN1Q13813 2472 aaKnown RBP15.26■□□□□ 0.03
SMPD3-203ENST00000563226 PSMB11A5LHX3 300 aa15.26■□□□□ 0.03
SMPD3-203ENST00000563226 OVOL3O00110 214 aa15.26■□□□□ 0.03
SMPD3-203ENST00000563226 HOXB4P17483 251 aaPredicted RBP15.26■□□□□ 0.03
SMPD3-203ENST00000563226 ZNF90Q03938 601 aa15.26■□□□□ 0.03
SMPD3-203ENST00000563226 PLGLAQ15195 96 aa15.26■□□□□ 0.03
SMPD3-203ENST00000563226 MMDQ15546 238 aa15.26■□□□□ 0.03
SMPD3-203ENST00000563226 ZNF114Q8NC26 417 aa15.26■□□□□ 0.03
SMPD3-203ENST00000563226 ZNF503Q96F45 646 aa15.26■□□□□ 0.03
SMPD3-203ENST00000563226 SAV1Q9H4B6 383 aaPredicted RBP15.26■□□□□ 0.03
SMPD3-203ENST00000563226 DMRT1Q9Y5R6 373 aa15.26■□□□□ 0.03
SMPD3-203ENST00000563226 VPS13CQ709C8 3753 aa15.25■□□□□ 0.03
SMPD3-203ENST00000563226 IGHV3-21A0A0B4J1V1 117 aa15.25■□□□□ 0.03
SMPD3-203ENST00000563226 PDE6DO43924 150 aa15.25■□□□□ 0.03
SMPD3-203ENST00000563226 OR5G3P0C626 314 aa15.25■□□□□ 0.03
SMPD3-203ENST00000563226 RND2P52198 227 aa15.25■□□□□ 0.03
SMPD3-203ENST00000563226 KIR3DL3Q8N743 410 aa15.25■□□□□ 0.03
SMPD3-203ENST00000563226 SRSF12Q8WXF0 261 aaKnown RBP15.25■□□□□ 0.03
SMPD3-203ENST00000563226 RNF5Q99942 180 aa15.25■□□□□ 0.03
SMPD3-203ENST00000563226 USP24Q9UPU5 2620 aa15.25■□□□□ 0.03
SMPD3-203ENST00000563226 TGIF2-C20orf24A0A0A6YYL0 155 aa15.24■□□□□ 0.03
SMPD3-203ENST00000563226 NDUFB4O95168 129 aa15.24■□□□□ 0.03
SMPD3-203ENST00000563226 CEACAM3P40198 252 aa15.24■□□□□ 0.03
SMPD3-203ENST00000563226 SSX2Q16385 188 aa15.24■□□□□ 0.03
SMPD3-203ENST00000563226 MORN5Q5VZ52 161 aa15.24■□□□□ 0.03
SMPD3-203ENST00000563226 C1orf122Q6ZSJ8 110 aa15.24■□□□□ 0.03
SMPD3-203ENST00000563226 THAP8Q8NA92 274 aa15.24■□□□□ 0.03
SMPD3-203ENST00000563226 NANPQ8TBE9 248 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms