RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 OR5T1Q8NG75 326 aa8.32□□□□□ -1.08
NPIPB3-210ENST00000542817 FAM110DQ8TAY7 271 aaPredicted RBP8.32□□□□□ -1.08
NPIPB3-210ENST00000542817 TMEM158Q8WZ71 300 aa8.32□□□□□ -1.08
NPIPB3-210ENST00000542817 FANCD2OSQ96PS1 177 aa8.32□□□□□ -1.08
NPIPB3-210ENST00000542817 SPIN2AQ99865 258 aa8.32□□□□□ -1.08
NPIPB3-210ENST00000542817 SPIN2BQ9BPZ2 258 aa8.32□□□□□ -1.08
NPIPB3-210ENST00000542817 SRSF8Q9BRL6 282 aaKnown RBP8.32□□□□□ -1.08
NPIPB3-210ENST00000542817 NKX6-2Q9C056 277 aaPredicted RBP8.32□□□□□ -1.08
NPIPB3-210ENST00000542817 C11orf1Q9H5F2 150 aa8.32□□□□□ -1.08
NPIPB3-210ENST00000542817 FKBP11Q9NYL4 201 aa8.32□□□□□ -1.08
NPIPB3-210ENST00000542817 DNAH3Q8TD57 4116 aa8.32□□□□□ -1.08
NPIPB3-210ENST00000542817 TRBV9A0A0B4J1U6 114 aa8.31□□□□□ -1.08
NPIPB3-210ENST00000542817 A0A1B0GUS0 222 aa8.31□□□□□ -1.08
NPIPB3-210ENST00000542817 F8W036 122 aa8.31□□□□□ -1.08
NPIPB3-210ENST00000542817 FBXO24O75426 580 aa8.31□□□□□ -1.08
NPIPB3-210ENST00000542817 ACTL6BO94805 426 aa8.31□□□□□ -1.08
NPIPB3-210ENST00000542817 PRH1P02810 166 aa8.31□□□□□ -1.08
NPIPB3-210ENST00000542817 REG1AP05451 166 aa8.31□□□□□ -1.08
NPIPB3-210ENST00000542817 CD28P10747 220 aa8.31□□□□□ -1.08
NPIPB3-210ENST00000542817 PSMB6P28072 239 aa8.31□□□□□ -1.08
NPIPB3-210ENST00000542817 OR2F1Q13607 317 aa8.31□□□□□ -1.08
NPIPB3-210ENST00000542817 GUCA2BQ16661 112 aa8.31□□□□□ -1.08
NPIPB3-210ENST00000542817 IAH1Q2TAA2 248 aaPredicted RBP8.31□□□□□ -1.08
NPIPB3-210ENST00000542817 KRTAP21-3Q3LHN1 58 aa8.31□□□□□ -1.08
NPIPB3-210ENST00000542817 OR2C3Q8N628 320 aa8.31□□□□□ -1.08
NPIPB3-210ENST00000542817 RNASE11Q8TAA1 199 aaKnown RBP8.31□□□□□ -1.08
NPIPB3-210ENST00000542817 RBKSQ9H477 322 aa8.31□□□□□ -1.08
NPIPB3-210ENST00000542817 WNK1Q9H4A3 2382 aa8.31□□□□□ -1.08
NPIPB3-210ENST00000542817 IGLV11-55A0A075B6I3 123 aa8.3□□□□□ -1.08
NPIPB3-210ENST00000542817 PIGBOS1A0A0B4J2F0 54 aa8.3□□□□□ -1.08
NPIPB3-210ENST00000542817 C13orf42A0A1B0GVH6 325 aa8.3□□□□□ -1.08
NPIPB3-210ENST00000542817 A0A1W2PN81 502 aa8.3□□□□□ -1.08
NPIPB3-210ENST00000542817 PSMB11A5LHX3 300 aa8.3□□□□□ -1.08
NPIPB3-210ENST00000542817 FAM90A26D6RGX4 464 aa8.3□□□□□ -1.08
NPIPB3-210ENST00000542817 HAX1O00165 279 aa8.3□□□□□ -1.08
NPIPB3-210ENST00000542817 GOSR2O14653 212 aa8.3□□□□□ -1.08
NPIPB3-210ENST00000542817 MBPP02686 304 aaPredicted RBP8.3□□□□□ -1.08
NPIPB3-210ENST00000542817 OR13C7P0DN81 318 aa8.3□□□□□ -1.08
NPIPB3-210ENST00000542817 CHRNA7P36544 502 aa8.3□□□□□ -1.08
NPIPB3-210ENST00000542817 PAX9P55771 341 aa8.3□□□□□ -1.08
NPIPB3-210ENST00000542817 C18orf65Q6ZTR6 163 aa8.3□□□□□ -1.08
NPIPB3-210ENST00000542817 KCNRGQ8N5I3 272 aa8.3□□□□□ -1.08
NPIPB3-210ENST00000542817 ZNF114Q8NC26 417 aa8.3□□□□□ -1.08
NPIPB3-210ENST00000542817 OR5AU1Q8NGC0 362 aa8.3□□□□□ -1.08
NPIPB3-210ENST00000542817 ABHD5Q8WTS1 349 aa8.3□□□□□ -1.08
NPIPB3-210ENST00000542817 C2orf50Q96LR7 162 aa8.3□□□□□ -1.08
NPIPB3-210ENST00000542817 TMEM68Q96MH6 324 aa8.3□□□□□ -1.08
NPIPB3-210ENST00000542817 P2RX4Q99571 388 aa8.3□□□□□ -1.08
NPIPB3-210ENST00000542817 CITED1Q99966 193 aa8.3□□□□□ -1.08
NPIPB3-210ENST00000542817 HINT2Q9BX68 163 aa8.3□□□□□ -1.08
NPIPB3-210ENST00000542817 ARL6Q9H0F7 186 aa8.3□□□□□ -1.08
NPIPB3-210ENST00000542817 RCL1Q9Y2P8 373 aaKnown RBP8.3□□□□□ -1.08
NPIPB3-210ENST00000542817 IFNA21P01568 189 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 IFNA17P01571 189 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 APOC3P02656 99 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 RPLP1P05386 114 aaKnown RBP8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 RNASE2P10153 161 aaKnown RBP8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 FOLR2P14207 255 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 MEOX2P50222 304 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 POLR2GP62487 172 aaKnown RBP eCLIP8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 DEFA5Q01523 94 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 TMEM267Q0VDI3 215 aaPredicted RBP8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 FOXE3Q13461 319 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 ALKAL2Q6UX46 152 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 CENPVQ7Z7K6 275 aaPredicted RBP8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 SVBPQ8N300 66 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 PCNPQ8WW12 178 aaKnown RBP8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 CITED2Q99967 270 aaPredicted RBP8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 MFFQ9GZY8 342 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 MAGT1Q9H0U3 335 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 MBD2Q9UBB5 411 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 CARHSP1Q9Y2V2 147 aaKnown RBP8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 F11RQ9Y624 299 aaKnown RBP8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 C5orf51A6NDU8 294 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 H0YIZ8 118 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 K7EPK0 472 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 S100A8P05109 93 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 ELANEP08246 267 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 RAB9AP51151 201 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 ARSJQ5FYB0 599 aaPredicted RBP8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 TEX38Q6PEX7 206 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 ATRAIDQ6UW56 229 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 LINC00469Q8N7U9 141 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 C11orf44Q8N8P7 122 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 ST8SIA2Q92186 375 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 ZNF414Q96IQ9 312 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 MS4A10Q96PG2 267 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 ZNF747Q9BV97 191 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 PLEKHA3Q9HB20 300 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 GSKIPQ9P0R6 139 aa8.29□□□□□ -1.08
NPIPB3-210ENST00000542817 TMEM218A2RU14 115 aa8.28□□□□□ -1.08
NPIPB3-210ENST00000542817 RNF222A6NCQ9 220 aa8.28□□□□□ -1.08
NPIPB3-210ENST00000542817 C15orf62A8K5M9 175 aa8.28□□□□□ -1.08
NPIPB3-210ENST00000542817 CEBPZOSA8MTT3 80 aa8.28□□□□□ -1.08
NPIPB3-210ENST00000542817 F8W735 103 aaPredicted RBP8.28□□□□□ -1.08
NPIPB3-210ENST00000542817 H3BUA1 57 aa8.28□□□□□ -1.08
NPIPB3-210ENST00000542817 ARPC5O15511 151 aa8.28□□□□□ -1.08
NPIPB3-210ENST00000542817 SYNGR2O43760 224 aa8.28□□□□□ -1.08
NPIPB3-210ENST00000542817 NDUFB8O95169 186 aa8.28□□□□□ -1.08
NPIPB3-210ENST00000542817 NKX2-1P43699 371 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms