RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 FAM87AP0C7U9 286 aa14.21□□□□□ -0.13
USH1C-205ENST00000527020 PNKDQ8N490 385 aa14.21□□□□□ -0.13
USH1C-205ENST00000527020 OR4A5Q8NH83 315 aa14.21□□□□□ -0.13
USH1C-205ENST00000527020 ARL2-SNX15V9GYD0 113 aa14.21□□□□□ -0.13
USH1C-205ENST00000527020 MDFIC2A0A1B0GVS7 189 aa14.2□□□□□ -0.14
USH1C-205ENST00000527020 XKRY2A2RUG3 117 aa14.2□□□□□ -0.14
USH1C-205ENST00000527020 PSMB11A5LHX3 300 aa14.2□□□□□ -0.14
USH1C-205ENST00000527020 IGHV1-8P0DP01 117 aa14.2□□□□□ -0.14
USH1C-205ENST00000527020 MRGPRG-AS1Q2M3A8 158 aa14.2□□□□□ -0.14
USH1C-205ENST00000527020 OR2T6Q8NHC8 308 aa14.2□□□□□ -0.14
USH1C-205ENST00000527020 TMEM37Q8WXS4 190 aa14.2□□□□□ -0.14
USH1C-205ENST00000527020 RITA1Q96K30 269 aa14.2□□□□□ -0.14
USH1C-205ENST00000527020 PACRGQ96M98 296 aaPredicted RBP14.2□□□□□ -0.14
USH1C-205ENST00000527020 VKORC1Q9BQB6 163 aa14.2□□□□□ -0.14
USH1C-205ENST00000527020 ZNF430Q9H8G1 570 aaPredicted RBP14.2□□□□□ -0.14
USH1C-205ENST00000527020 WASHC3Q9Y3C0 194 aa14.2□□□□□ -0.14
USH1C-205ENST00000527020 DMRT1Q9Y5R6 373 aa14.2□□□□□ -0.14
USH1C-205ENST00000527020 IGHV1-69-2A0A0G2JMI3 117 aa14.2□□□□□ -0.14
USH1C-205ENST00000527020 PLAUP00749 431 aa14.2□□□□□ -0.14
USH1C-205ENST00000527020 PDLIM4P50479 330 aa14.2□□□□□ -0.14
USH1C-205ENST00000527020 SSBP2P81877 361 aaPredicted RBP14.2□□□□□ -0.14
USH1C-205ENST00000527020 ERHP84090 104 aaKnown RBP14.2□□□□□ -0.14
USH1C-205ENST00000527020 SGMS2Q8NHU3 365 aa14.2□□□□□ -0.14
USH1C-205ENST00000527020 CACNG8Q8WXS5 425 aa14.2□□□□□ -0.14
USH1C-205ENST00000527020 CHODLQ9H9P2 273 aa14.2□□□□□ -0.14
USH1C-205ENST00000527020 TPSG1Q9NRR2 321 aa14.2□□□□□ -0.14
USH1C-205ENST00000527020 TECRQ9NZ01 308 aaKnown RBP14.2□□□□□ -0.14
USH1C-205ENST00000527020 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.19□□□□□ -0.14
USH1C-205ENST00000527020 C9JCJ5 164 aa14.19□□□□□ -0.14
USH1C-205ENST00000527020 AMBPP02760 352 aa14.19□□□□□ -0.14
USH1C-205ENST00000527020 APOBEC3AP31941 199 aaPredicted RBP14.19□□□□□ -0.14
USH1C-205ENST00000527020 GPX4P36969 197 aaPredicted RBP14.19□□□□□ -0.14
USH1C-205ENST00000527020 HLA-DRB5Q30154 266 aa14.19□□□□□ -0.14
USH1C-205ENST00000527020 VSTM2AQ8TAG5 236 aa14.19□□□□□ -0.14
USH1C-205ENST00000527020 UHRF2Q96PU4 802 aa14.19□□□□□ -0.14
USH1C-205ENST00000527020 FNDC4Q9H6D8 234 aaPredicted RBP14.19□□□□□ -0.14
USH1C-205ENST00000527020 DCHS2Q6V1P9 2916 aa14.19□□□□□ -0.14
USH1C-205ENST00000527020 A0A0U1RQK1 487 aa14.19□□□□□ -0.14
USH1C-205ENST00000527020 ZNF320A2RRD8 509 aa14.19□□□□□ -0.14
USH1C-205ENST00000527020 RBPJQ06330 500 aa14.19□□□□□ -0.14
USH1C-205ENST00000527020 TGIF2LXQ8IUE1 241 aa14.19□□□□□ -0.14
USH1C-205ENST00000527020 OR10G8Q8NGN5 311 aa14.19□□□□□ -0.14
USH1C-205ENST00000527020 ACY3Q96HD9 319 aa14.19□□□□□ -0.14
USH1C-205ENST00000527020 PRDM13Q9H4Q3 707 aa14.19□□□□□ -0.14
USH1C-205ENST00000527020 TMEM167BQ9NRX6 74 aa14.19□□□□□ -0.14
USH1C-205ENST00000527020 A0A1W2PN81 502 aa14.18□□□□□ -0.14
USH1C-205ENST00000527020 MORN5Q5VZ52 161 aa14.18□□□□□ -0.14
USH1C-205ENST00000527020 C19orf24Q9BVV8 132 aa14.18□□□□□ -0.14
USH1C-205ENST00000527020 LY96Q9Y6Y9 160 aa14.18□□□□□ -0.14
USH1C-205ENST00000527020 RD3LP0DJH9 198 aa14.17□□□□□ -0.14
USH1C-205ENST00000527020 PQLC2Q6ZP29 291 aa14.17□□□□□ -0.14
USH1C-205ENST00000527020 EAF1Q96JC9 268 aaPredicted RBP14.17□□□□□ -0.14
USH1C-205ENST00000527020 SLC25A33Q9BSK2 321 aa14.17□□□□□ -0.14
USH1C-205ENST00000527020 LRBAP50851 2863 aa14.17□□□□□ -0.14
USH1C-205ENST00000527020 TRBV23-1A0A0A0MS06 115 aa14.17□□□□□ -0.14
USH1C-205ENST00000527020 GGTLC3B5MD39 225 aa14.17□□□□□ -0.14
USH1C-205ENST00000527020 B9A039 149 aa14.17□□□□□ -0.14
USH1C-205ENST00000527020 SLC25A17O43808 307 aa14.17□□□□□ -0.14
USH1C-205ENST00000527020 OR7C2O60412 319 aa14.17□□□□□ -0.14
USH1C-205ENST00000527020 CD3EP07766 207 aa14.17□□□□□ -0.14
USH1C-205ENST00000527020 HIST1H1BP16401 226 aaKnown RBP14.17□□□□□ -0.14
USH1C-205ENST00000527020 DLX1P56177 255 aa14.17□□□□□ -0.14
USH1C-205ENST00000527020 FAM167A-AS1Q96KT0 104 aa14.17□□□□□ -0.14
USH1C-205ENST00000527020 TMEM133Q9H2Q1 129 aa14.17□□□□□ -0.14
USH1C-205ENST00000527020 MALRD1Q5VYJ5 2156 aa14.16□□□□□ -0.14
USH1C-205ENST00000527020 LYNX1G3V0Z9 82 aa14.16□□□□□ -0.14
USH1C-205ENST00000527020 OR10J4P0C629 311 aa14.16□□□□□ -0.14
USH1C-205ENST00000527020 LYNX1P0DP58 116 aa14.16□□□□□ -0.14
USH1C-205ENST00000527020 CRYBB3P26998 211 aa14.16□□□□□ -0.14
USH1C-205ENST00000527020 DNLZQ5SXM8 178 aa14.16□□□□□ -0.14
USH1C-205ENST00000527020 MRPL36Q9P0J6 103 aaKnown RBP14.16□□□□□ -0.14
USH1C-205ENST00000527020 IGKV1D-37A0A075B6S9 117 aa14.16□□□□□ -0.14
USH1C-205ENST00000527020 A0A1W2PPI3 338 aa14.16□□□□□ -0.14
USH1C-205ENST00000527020 SLC17A3O00476 420 aa14.16□□□□□ -0.14
USH1C-205ENST00000527020 C8orf88P0DMB2 117 aa14.16□□□□□ -0.14
USH1C-205ENST00000527020 LINC01560Q8TB33 94 aa14.16□□□□□ -0.14
USH1C-205ENST00000527020 RNASEH2CQ8TDP1 164 aaKnown RBP14.16□□□□□ -0.14
USH1C-205ENST00000527020 IGHV3-72A0A0B4J1Y9 119 aa14.15□□□□□ -0.14
USH1C-205ENST00000527020 TRAV5A0A0B4J249 113 aa14.15□□□□□ -0.14
USH1C-205ENST00000527020 SIAH2O43255 324 aa14.15□□□□□ -0.14
USH1C-205ENST00000527020 IGHV3-48P01763 117 aa14.15□□□□□ -0.14
USH1C-205ENST00000527020 GRNP28799 593 aaKnown RBP14.15□□□□□ -0.14
USH1C-205ENST00000527020 PPOXP50336 477 aa14.15□□□□□ -0.14
USH1C-205ENST00000527020 BTF3L4Q96K17 158 aa14.15□□□□□ -0.14
USH1C-205ENST00000527020 SLC25A2Q9BXI2 301 aa14.15□□□□□ -0.14
USH1C-205ENST00000527020 TRAPPC1Q9Y5R8 145 aa14.15□□□□□ -0.14
USH1C-205ENST00000527020 TACC2O95359 2948 aa14.15□□□□□ -0.14
USH1C-205ENST00000527020 TRAV20A0A0B4J274 112 aa14.15□□□□□ -0.15
USH1C-205ENST00000527020 MC5RP33032 325 aa14.15□□□□□ -0.15
USH1C-205ENST00000527020 TAS2R45P59539 299 aa14.15□□□□□ -0.15
USH1C-205ENST00000527020 VMA21Q3ZAQ7 101 aa14.15□□□□□ -0.15
USH1C-205ENST00000527020 CENPWQ5EE01 88 aa14.15□□□□□ -0.15
USH1C-205ENST00000527020 ZNF841Q6ZN19 808 aa14.15□□□□□ -0.15
USH1C-205ENST00000527020 PFDN5Q99471 154 aa14.15□□□□□ -0.15
USH1C-205ENST00000527020 MRPL32Q9BYC8 188 aaKnown RBP14.15□□□□□ -0.15
USH1C-205ENST00000527020 IL36BQ9NZH7 164 aa14.15□□□□□ -0.15
USH1C-205ENST00000527020 ZZEF1O43149 2961 aa14.14□□□□□ -0.15
USH1C-205ENST00000527020 HELTA6NFD8 242 aa14.14□□□□□ -0.15
USH1C-205ENST00000527020 CNN1P51911 297 aaKnown RBP14.14□□□□□ -0.15
USH1C-205ENST00000527020 PRB3Q04118 309 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms